RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 SHC4Q6S5L8 630 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 ZNF804AQ7Z570 1209 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 CATIPQ7Z7H3 387 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 NUP133Q8WUM0 1156 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 SHISA4Q96DD7 197 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 KIAA1468Q9P260 1216 aa11.04□□□□□ -0.64
LCOR-209ENST00000540664 CUTAO60888 179 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 PRDM1O75626 825 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 LDHBP07195 334 aaKnown RBP11.03□□□□□ -0.64
LCOR-209ENST00000540664 SLC3A2P08195 630 aaKnown RBP11.03□□□□□ -0.64
LCOR-209ENST00000540664 MARCKSP29966 332 aaPredicted RBP11.03□□□□□ -0.64
LCOR-209ENST00000540664 ZNF75DP51815 510 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 ST5P78524 1137 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 GPSM2P81274 684 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.03□□□□□ -0.64
LCOR-209ENST00000540664 DZIP1Q86YF9 867 aaKnown RBP11.03□□□□□ -0.64
LCOR-209ENST00000540664 DHX40Q8IX18 779 aaKnown RBP11.03□□□□□ -0.64
LCOR-209ENST00000540664 CMTR1Q8N1G2 835 aaKnown RBP11.03□□□□□ -0.64
LCOR-209ENST00000540664 PROM2Q8N271 834 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 RPGRQ92834 1020 aaKnown RBP11.03□□□□□ -0.64
LCOR-209ENST00000540664 BPIFA3Q9BQP9 254 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 PODXL2Q9NZ53 605 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 KCNJ14Q9UNX9 436 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 DDX60LQ5H9U9 1706 aaKnown RBP11.03□□□□□ -0.64
LCOR-209ENST00000540664 NAV1Q8NEY1 1877 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 CYP2D6P10635 497 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 IL1R1P14778 569 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 ATP2B4P23634 1241 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 CDC25BP30305 580 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 GSTO1P78417 241 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 KIAA2012Q0VF49 1180 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 RILPL1Q5EBL4 403 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 C12orf60Q5U649 245 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 TMTC3Q6ZXV5 915 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 PIBF1Q8WXW3 757 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 RBM17Q96I25 401 aaKnown RBP11.03□□□□□ -0.64
LCOR-209ENST00000540664 SDF4Q9BRK5 362 aa11.03□□□□□ -0.64
LCOR-209ENST00000540664 CDK5RAP2Q96SN8 1893 aa11.02□□□□□ -0.64
LCOR-209ENST00000540664 NRXN2Q9P2S2 1712 aa11.02□□□□□ -0.65
LCOR-209ENST00000540664 BBOX1O75936 387 aa11.02□□□□□ -0.65
LCOR-209ENST00000540664 PLCB2Q00722 1185 aa11.02□□□□□ -0.65
LCOR-209ENST00000540664 PDE4BQ07343 736 aa11.02□□□□□ -0.65
LCOR-209ENST00000540664 DDR1Q08345 913 aa11.02□□□□□ -0.65
LCOR-209ENST00000540664 ELOA2Q8IYF1 753 aaPredicted RBP11.02□□□□□ -0.65
LCOR-209ENST00000540664 ANKS1AQ92625 1134 aa11.02□□□□□ -0.65
LCOR-209ENST00000540664 ZNF830Q96NB3 372 aaPredicted RBP11.02□□□□□ -0.65
LCOR-209ENST00000540664 PHF20Q9BVI0 1012 aa11.02□□□□□ -0.65
LCOR-209ENST00000540664 KCNF1Q9H3M0 494 aa11.02□□□□□ -0.65
LCOR-209ENST00000540664 TTC12Q9H892 705 aaPredicted RBP11.02□□□□□ -0.65
LCOR-209ENST00000540664 GOLGA6L6A8MZA4 724 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 POLRMTO00411 1230 aaKnown RBP11.01□□□□□ -0.65
LCOR-209ENST00000540664 PLEKHA8P1O95397 391 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 TERF1P54274 439 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 GRIK5Q16478 980 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 RCSD1Q6JBY9 416 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 CEP57L1Q8IYX8 460 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 CCDC82Q8N4S0 544 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 CRAMP1Q96RY5 1269 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 CD209Q9NNX6 404 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 TUBE1Q9UJT0 475 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 JAG2Q9Y219 1238 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 CNTNAP5Q8WYK1 1306 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 USP17L8P0C7I0 530 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 PTPREP23469 700 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 HMGB2P26583 209 aaKnown RBP11.01□□□□□ -0.65
LCOR-209ENST00000540664 SYKP43405 635 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 NR5A1Q13285 461 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 CERS3Q8IU89 383 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 ANKRD31Q8N7Z5 1873 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 KRI1Q8N9T8 703 aaKnown RBP11.01□□□□□ -0.65
LCOR-209ENST00000540664 OXER1Q8TDS5 423 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 SH3RF3Q8TEJ3 882 aaPredicted RBP11.01□□□□□ -0.65
LCOR-209ENST00000540664 ERCC4Q92889 916 aaPredicted RBP11.01□□□□□ -0.65
LCOR-209ENST00000540664 MRFAP1L1Q96HT8 127 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 RTFDC1Q9BY42 306 aaPredicted RBP11.01□□□□□ -0.65
LCOR-209ENST00000540664 NAT10Q9H0A0 1025 aaKnown RBP11.01□□□□□ -0.65
LCOR-209ENST00000540664 RNF39Q9H2S5 420 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 SPTLC3Q9NUV7 552 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 FBXO2Q9UK22 296 aaPredicted RBP11.01□□□□□ -0.65
LCOR-209ENST00000540664 EP400Q96L91 3159 aa11.01□□□□□ -0.65
LCOR-209ENST00000540664 GOLGA6L19H0YKK7 550 aa11□□□□□ -0.65
LCOR-209ENST00000540664 LDHCP07864 332 aa11□□□□□ -0.65
LCOR-209ENST00000540664 NLRP12P59046 1061 aa11□□□□□ -0.65
LCOR-209ENST00000540664 NPY5RQ15761 445 aa11□□□□□ -0.65
LCOR-209ENST00000540664 MPNDQ8N594 471 aa11□□□□□ -0.65
LCOR-209ENST00000540664 ZNF579Q8NAF0 562 aaKnown RBP11□□□□□ -0.65
LCOR-209ENST00000540664 TNFRSF25Q93038 417 aa11□□□□□ -0.65
LCOR-209ENST00000540664 CLIC6Q96NY7 704 aa11□□□□□ -0.65
LCOR-209ENST00000540664 TRIM5Q9C035 493 aa11□□□□□ -0.65
LCOR-209ENST00000540664 MCM9Q9NXL9 1143 aa11□□□□□ -0.65
LCOR-209ENST00000540664 GGA1Q9UJY5 639 aa11□□□□□ -0.65
LCOR-209ENST00000540664 A0A087WWV3 80 aa11□□□□□ -0.65
LCOR-209ENST00000540664 NMT2O60551 498 aa11□□□□□ -0.65
LCOR-209ENST00000540664 UFL1O94874 794 aa11□□□□□ -0.65
LCOR-209ENST00000540664 BAG3O95817 575 aa11□□□□□ -0.65
LCOR-209ENST00000540664 XBP1P17861 261 aa11□□□□□ -0.65
LCOR-209ENST00000540664 AKAP17AQ02040 695 aaKnown RBP11□□□□□ -0.65
LCOR-209ENST00000540664 ZNF827Q17R98 1081 aa11□□□□□ -0.65
LCOR-209ENST00000540664 DPCR1Q3MIW9 517 aa11□□□□□ -0.65
LCOR-209ENST00000540664 FAM47AQ5JRC9 791 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms