RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 BAG1Q99933 345 aaPredicted RBP11.25□□□□□ -0.61
PHC1-208ENST00000540574 PALLDQ8WX93 1383 aa11.25□□□□□ -0.61
PHC1-208ENST00000540574 FAM193AP78312 1265 aa11.25□□□□□ -0.61
PHC1-208ENST00000540574 SHC4Q6S5L8 630 aa11.25□□□□□ -0.61
PHC1-208ENST00000540574 TMCO3Q6UWJ1 677 aa11.25□□□□□ -0.61
PHC1-208ENST00000540574 DHX40Q8IX18 779 aaKnown RBP11.25□□□□□ -0.61
PHC1-208ENST00000540574 TRIM47Q96LD4 638 aa11.25□□□□□ -0.61
PHC1-208ENST00000540574 HINFPQ9BQA5 517 aa11.25□□□□□ -0.61
PHC1-208ENST00000540574 LTN1O94822 1766 aa11.25□□□□□ -0.61
PHC1-208ENST00000540574 KRT18P05783 430 aaKnown RBP11.25□□□□□ -0.61
PHC1-208ENST00000540574 NAPAP54920 295 aa11.25□□□□□ -0.61
PHC1-208ENST00000540574 TTC38Q5R3I4 469 aa11.25□□□□□ -0.61
PHC1-208ENST00000540574 PLA2G4DQ86XP0 818 aa11.25□□□□□ -0.61
PHC1-208ENST00000540574 ZSCAN10Q96SZ4 725 aaPredicted RBP11.25□□□□□ -0.61
PHC1-208ENST00000540574 SEC63Q9UGP8 760 aaKnown RBP11.25□□□□□ -0.61
PHC1-208ENST00000540574 RGPD2P0DJD1 1756 aa11.25□□□□□ -0.61
PHC1-208ENST00000540574 PRR29P0C7W0 189 aa11.24□□□□□ -0.61
PHC1-208ENST00000540574 PTGDRQ13258 359 aa11.24□□□□□ -0.61
PHC1-208ENST00000540574 TAB2Q9NYJ8 693 aa11.24□□□□□ -0.61
PHC1-208ENST00000540574 A0A1W2PQ27 194 aa11.24□□□□□ -0.61
PHC1-208ENST00000540574 A0A1W2PQ64 194 aa11.24□□□□□ -0.61
PHC1-208ENST00000540574 A0A1W2PQD8 194 aa11.24□□□□□ -0.61
PHC1-208ENST00000540574 CCP110O43303 1012 aa11.24□□□□□ -0.61
PHC1-208ENST00000540574 KIF5BP33176 963 aa11.24□□□□□ -0.61
PHC1-208ENST00000540574 ILDR1Q86SU0 546 aaPredicted RBP11.24□□□□□ -0.61
PHC1-208ENST00000540574 DEF6Q9H4E7 631 aa11.24□□□□□ -0.61
PHC1-208ENST00000540574 CGNQ9P2M7 1197 aaKnown RBP11.24□□□□□ -0.61
PHC1-208ENST00000540574 MROH7-TTC4A0A0A0MT08 1334 aa11.24□□□□□ -0.61
PHC1-208ENST00000540574 CSF1RP07333 972 aa11.24□□□□□ -0.61
PHC1-208ENST00000540574 STIM1Q13586 685 aa11.24□□□□□ -0.61
PHC1-208ENST00000540574 JAKMIP3Q5VZ66 844 aa11.24□□□□□ -0.61
PHC1-208ENST00000540574 IGSF22Q8N9C0 903 aa11.24□□□□□ -0.61
PHC1-208ENST00000540574 NKX2-3Q8TAU0 364 aa11.24□□□□□ -0.61
PHC1-208ENST00000540574 SYMPKQ92797 1274 aaKnown RBP11.24□□□□□ -0.61
PHC1-208ENST00000540574 SETD1AO15047 1707 aaKnown RBP11.23□□□□□ -0.61
PHC1-208ENST00000540574 KIAA1328Q86T90 577 aa11.23□□□□□ -0.61
PHC1-208ENST00000540574 SLC44A5Q8NCS7 719 aa11.23□□□□□ -0.61
PHC1-208ENST00000540574 EPC1Q9H2F5 836 aa11.23□□□□□ -0.61
PHC1-208ENST00000540574 FBXO3Q9UK99 471 aa11.23□□□□□ -0.61
PHC1-208ENST00000540574 BAG3O95817 575 aa11.23□□□□□ -0.61
PHC1-208ENST00000540574 TNNT3P45378 269 aaPredicted RBP11.23□□□□□ -0.61
PHC1-208ENST00000540574 MTIF2P46199 727 aaKnown RBP11.23□□□□□ -0.61
PHC1-208ENST00000540574 KLHL34Q8N239 644 aa11.23□□□□□ -0.61
PHC1-208ENST00000540574 NWD1Q149M9 1564 aa11.23□□□□□ -0.61
PHC1-208ENST00000540574 MST1RQ04912 1400 aa11.23□□□□□ -0.61
PHC1-208ENST00000540574 KIF5CO60282 957 aa11.23□□□□□ -0.61
PHC1-208ENST00000540574 MMP1P03956 469 aa11.23□□□□□ -0.61
PHC1-208ENST00000540574 KLRK1P26718 216 aa11.23□□□□□ -0.61
PHC1-208ENST00000540574 TERF1P54274 439 aa11.23□□□□□ -0.61
PHC1-208ENST00000540574 RAD51AP2Q09MP3 1159 aa11.23□□□□□ -0.61
PHC1-208ENST00000540574 ITPK1Q13572 414 aa11.23□□□□□ -0.61
PHC1-208ENST00000540574 CRACR2BQ8N4Y2 399 aaPredicted RBP11.23□□□□□ -0.61
PHC1-208ENST00000540574 SMARCC1Q92922 1105 aaPredicted RBP11.23□□□□□ -0.61
PHC1-208ENST00000540574 UBA5Q9GZZ9 404 aa11.23□□□□□ -0.61
PHC1-208ENST00000540574 USP17L3A6NCW0 530 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 USP17L4A6NCW7 530 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 UFL1O94874 794 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 MATR3P43243 847 aaKnown RBP eCLIP11.22□□□□□ -0.61
PHC1-208ENST00000540574 MCM6Q14566 821 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 ZNF569Q5MCW4 686 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 FKBP15Q5T1M5 1219 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 USP17L1Q7RTZ2 530 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 IGDCC4Q8TDY8 1250 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 ALDH8A1Q9H2A2 487 aaPredicted RBP11.22□□□□□ -0.61
PHC1-208ENST00000540574 GUCA1BQ9UMX6 200 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 FMN2Q9NZ56 1722 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 KIF2AO00139 706 aaPredicted RBP11.22□□□□□ -0.61
PHC1-208ENST00000540574 IFNAR1P17181 557 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 ASIC1P78348 528 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 TRIM28Q13263 835 aaKnown RBP11.22□□□□□ -0.61
PHC1-208ENST00000540574 INF2Q27J81 1249 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 NOM1Q5C9Z4 860 aaKnown RBP11.22□□□□□ -0.61
PHC1-208ENST00000540574 GPCPD1Q9NPB8 672 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 RTL9Q8NET4 1388 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 FMNL1O95466 1100 aaPredicted RBP11.22□□□□□ -0.61
PHC1-208ENST00000540574 RHOXF2BP0C7M4 288 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 UBXN1Q04323 297 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 KANK3Q6NY19 840 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 RHOXF2Q9BQY4 288 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 TCP11L1Q9NUJ3 509 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 CPDO75976 1380 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 KIF13AQ9H1H9 1805 aa11.22□□□□□ -0.61
PHC1-208ENST00000540574 EPS15P42566 896 aa11.21□□□□□ -0.61
PHC1-208ENST00000540574 TNNI2P48788 182 aa11.21□□□□□ -0.61
PHC1-208ENST00000540574 IQUBQ8NA54 791 aa11.21□□□□□ -0.61
PHC1-208ENST00000540574 ENGASEQ8NFI3 743 aa11.21□□□□□ -0.61
PHC1-208ENST00000540574 ZNHIT6Q9NWK9 470 aaKnown RBP11.21□□□□□ -0.61
PHC1-208ENST00000540574 TRIM21P19474 475 aaKnown RBP11.21□□□□□ -0.61
PHC1-208ENST00000540574 MECOMQ03112 1051 aa11.21□□□□□ -0.61
PHC1-208ENST00000540574 EVX2Q03828 476 aa11.21□□□□□ -0.61
PHC1-208ENST00000540574 TBC1D9BQ66K14 1250 aa11.21□□□□□ -0.61
PHC1-208ENST00000540574 TEX11Q8IYF3 940 aa11.21□□□□□ -0.61
PHC1-208ENST00000540574 ENAHQ8N8S7 591 aaPredicted RBP11.21□□□□□ -0.61
PHC1-208ENST00000540574 ZNF622Q969S3 477 aaKnown RBP eCLIP11.21□□□□□ -0.61
PHC1-208ENST00000540574 PPP1R13BQ96KQ4 1090 aa11.21□□□□□ -0.61
PHC1-208ENST00000540574 CAPZA3Q96KX2 299 aa11.21□□□□□ -0.61
PHC1-208ENST00000540574 MAN1B1Q9UKM7 699 aa11.21□□□□□ -0.61
PHC1-208ENST00000540574 NFAT5O94916 1531 aa11.21□□□□□ -0.61
PHC1-208ENST00000540574 SYNRGQ9UMZ2 1314 aa11.21□□□□□ -0.62
PHC1-208ENST00000540574 PHACTR2O75167 634 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms