RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 SAFBQ15424 915 aaKnown RBP eCLIP9.64□□□□□ -0.87
C2CD3-215ENST00000540452 TTC6Q86TZ1 520 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 CRACR2BQ8N4Y2 399 aaPredicted RBP9.64□□□□□ -0.87
C2CD3-215ENST00000540452 JMYQ8N9B5 988 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 SH3RF3Q8TEJ3 882 aaPredicted RBP9.64□□□□□ -0.87
C2CD3-215ENST00000540452 TEKT1Q969V4 418 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 DDX11Q96FC9 970 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 ZDHHC15Q96MV8 337 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 LZTS2Q9BRK4 669 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 ALG1Q9BT22 464 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 EHD4Q9H223 541 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 FOXP1Q9H334 677 aaPredicted RBP9.64□□□□□ -0.87
C2CD3-215ENST00000540452 TMEM63CQ9P1W3 806 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 TACC3Q9Y6A5 838 aa9.64□□□□□ -0.87
C2CD3-215ENST00000540452 GREB1LQ9C091 1923 aaPredicted RBP9.64□□□□□ -0.87
C2CD3-215ENST00000540452 FLT1P17948 1338 aa9.63□□□□□ -0.87
C2CD3-215ENST00000540452 TSPY2A6NKD2 308 aa9.63□□□□□ -0.87
C2CD3-215ENST00000540452 G3V3G9 751 aa9.63□□□□□ -0.87
C2CD3-215ENST00000540452 PRPF3O43395 683 aaKnown RBP9.63□□□□□ -0.87
C2CD3-215ENST00000540452 RANBP6O60518 1105 aaKnown RBP9.63□□□□□ -0.87
C2CD3-215ENST00000540452 BMP15O95972 392 aa9.63□□□□□ -0.87
C2CD3-215ENST00000540452 TGFB2P61812 414 aa9.63□□□□□ -0.87
C2CD3-215ENST00000540452 GTF2IP78347 998 aa9.63□□□□□ -0.87
C2CD3-215ENST00000540452 AKAP17AQ02040 695 aaKnown RBP9.63□□□□□ -0.87
C2CD3-215ENST00000540452 RRP12Q5JTH9 1297 aaKnown RBP9.63□□□□□ -0.87
C2CD3-215ENST00000540452 DCAF8Q5TAQ9 597 aa9.63□□□□□ -0.87
C2CD3-215ENST00000540452 FOXD4L5Q5VV16 416 aaPredicted RBP9.63□□□□□ -0.87
C2CD3-215ENST00000540452 MYSM1Q5VVJ2 828 aa9.63□□□□□ -0.87
C2CD3-215ENST00000540452 RBM43Q6ZSC3 357 aaKnown RBP9.63□□□□□ -0.87
C2CD3-215ENST00000540452 NBPF11Q86T75 865 aa9.63□□□□□ -0.87
C2CD3-215ENST00000540452 TEX11Q8IYF3 940 aa9.63□□□□□ -0.87
C2CD3-215ENST00000540452 CTCFLQ8NI51 663 aaPredicted RBP9.63□□□□□ -0.87
C2CD3-215ENST00000540452 FOXD4L4Q8WXT5 416 aaPredicted RBP9.63□□□□□ -0.87
C2CD3-215ENST00000540452 ANP32BQ92688 251 aaKnown RBP9.63□□□□□ -0.87
C2CD3-215ENST00000540452 DHX36Q9H2U1 1008 aaKnown RBP9.63□□□□□ -0.87
C2CD3-215ENST00000540452 GPHNQ9NQX3 736 aaPredicted RBP9.63□□□□□ -0.87
C2CD3-215ENST00000540452 SERPINA10Q9UK55 444 aa9.63□□□□□ -0.87
C2CD3-215ENST00000540452 DAGLAQ9Y4D2 1042 aa9.63□□□□□ -0.87
C2CD3-215ENST00000540452 BRCA1P38398 1863 aaKnown RBP9.63□□□□□ -0.87
C2CD3-215ENST00000540452 hCG_1984214I3L0E3 225 aa9.62□□□□□ -0.87
C2CD3-215ENST00000540452 PPP6R2O75170 966 aa9.62□□□□□ -0.87
C2CD3-215ENST00000540452 MMP1P03956 469 aa9.62□□□□□ -0.87
C2CD3-215ENST00000540452 POLR3DP05423 398 aaPredicted RBP9.62□□□□□ -0.87
C2CD3-215ENST00000540452 DIXDC1Q155Q3 683 aa9.62□□□□□ -0.87
C2CD3-215ENST00000540452 UVSSAQ2YD98 709 aa9.62□□□□□ -0.87
C2CD3-215ENST00000540452 CCDC93Q567U6 631 aa9.62□□□□□ -0.87
C2CD3-215ENST00000540452 KRT40Q6A162 431 aa9.62□□□□□ -0.87
C2CD3-215ENST00000540452 ADALQ6DHV7 355 aa9.62□□□□□ -0.87
C2CD3-215ENST00000540452 GALNT17Q6IS24 598 aa9.62□□□□□ -0.87
C2CD3-215ENST00000540452 TMTC3Q6ZXV5 915 aa9.62□□□□□ -0.87
C2CD3-215ENST00000540452 FERMT3Q86UX7 667 aa9.62□□□□□ -0.87
C2CD3-215ENST00000540452 ZNF444Q8N0Y2 327 aaPredicted RBP9.62□□□□□ -0.87
C2CD3-215ENST00000540452 ZNF713Q8N859 430 aaPredicted RBP9.62□□□□□ -0.87
C2CD3-215ENST00000540452 NEDD1Q8NHV4 660 aa9.62□□□□□ -0.87
C2CD3-215ENST00000540452 TGFBRAP1Q8WUH2 860 aa9.62□□□□□ -0.87
C2CD3-215ENST00000540452 ZNF622Q969S3 477 aaKnown RBP eCLIP9.62□□□□□ -0.87
C2CD3-215ENST00000540452 IDI2Q9BXS1 227 aa9.62□□□□□ -0.87
C2CD3-215ENST00000540452 GZF1Q9H116 711 aaPredicted RBP9.62□□□□□ -0.87
C2CD3-215ENST00000540452 MKNK2Q9HBH9 465 aa9.62□□□□□ -0.87
C2CD3-215ENST00000540452 SH3GLB2Q9NR46 395 aa9.62□□□□□ -0.87
C2CD3-215ENST00000540452 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.62□□□□□ -0.87
C2CD3-215ENST00000540452 SYNPO2Q9UMS6 1093 aa9.62□□□□□ -0.87
C2CD3-215ENST00000540452 SCN9AQ15858 1988 aa9.61□□□□□ -0.87
C2CD3-215ENST00000540452 USP17L3A6NCW0 530 aa9.61□□□□□ -0.87
C2CD3-215ENST00000540452 USP17L4A6NCW7 530 aa9.61□□□□□ -0.87
C2CD3-215ENST00000540452 GABPAQ06546 454 aa9.61□□□□□ -0.87
C2CD3-215ENST00000540452 FUT2Q10981 343 aa9.61□□□□□ -0.87
C2CD3-215ENST00000540452 RILPL1Q5EBL4 403 aa9.61□□□□□ -0.87
C2CD3-215ENST00000540452 USP17L1Q7RTZ2 530 aa9.61□□□□□ -0.87
C2CD3-215ENST00000540452 TEX2Q8IWB9 1127 aa9.61□□□□□ -0.87
C2CD3-215ENST00000540452 ELOA2Q8IYF1 753 aaPredicted RBP9.61□□□□□ -0.87
C2CD3-215ENST00000540452 TTLL6Q8N841 843 aa9.61□□□□□ -0.87
C2CD3-215ENST00000540452 LINC00301Q8NCQ3 95 aa9.61□□□□□ -0.87
C2CD3-215ENST00000540452 CCDC17Q96LX7 622 aa9.61□□□□□ -0.87
C2CD3-215ENST00000540452 KAT14Q9H8E8 782 aa9.61□□□□□ -0.87
C2CD3-215ENST00000540452 BRMS1Q9HCU9 246 aa9.61□□□□□ -0.87
C2CD3-215ENST00000540452 CEP131Q9UPN4 1083 aa9.61□□□□□ -0.87
C2CD3-215ENST00000540452 FER1L6Q2WGJ9 1857 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 FAM237AA0A1B0GTK4 181 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 GADD45BO75293 160 aaPredicted RBP9.6□□□□□ -0.87
C2CD3-215ENST00000540452 HLA-DOAP06340 250 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 USP17L8P0C7I0 530 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 TSPY3P0CV98 308 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 TSPY8P0CW00 308 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 RASA1P20936 1047 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 TRAPPC10P48553 1259 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 CDK8P49336 464 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 SLC39A14Q15043 492 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 DACT2Q5SW24 774 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 RCSD1Q6JBY9 416 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 METTL16Q86W50 562 aaKnown RBP9.6□□□□□ -0.87
C2CD3-215ENST00000540452 NOSTRINQ8IVI9 506 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 SPZ1Q9BXG8 430 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 SLC26A6Q9BXS9 759 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 NUP62CLQ9H1M0 184 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 TSPY26PQ9H489 355 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 GDPD2Q9HCC8 539 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 TTF2Q9UNY4 1162 aaKnown RBP9.6□□□□□ -0.87
C2CD3-215ENST00000540452 ATRNL1Q5VV63 1379 aa9.6□□□□□ -0.87
C2CD3-215ENST00000540452 CNTNAP5Q8WYK1 1306 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms