RNA–Protein interactions for RNA: ENST00000540250.1

LINC00943-206, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 1,190 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-206ENST00000540250 WEE1P30291 646 aa10.09□□□□□ -0.79
LINC00943-206ENST00000540250 CD97P48960 835 aa10.09□□□□□ -0.79
LINC00943-206ENST00000540250 MTHFSDQ2M296 383 aaKnown RBP10.09□□□□□ -0.79
LINC00943-206ENST00000540250 NBPF6Q5VWK0 638 aa10.09□□□□□ -0.79
LINC00943-206ENST00000540250 AGGF1Q8N302 714 aaeCLIP10.09□□□□□ -0.79
LINC00943-206ENST00000540250 VTI1AQ96AJ9 217 aa10.09□□□□□ -0.79
LINC00943-206ENST00000540250 NBPF4Q96M43 638 aa10.09□□□□□ -0.79
LINC00943-206ENST00000540250 NSUN5Q96P11 429 aaKnown RBP10.09□□□□□ -0.79
LINC00943-206ENST00000540250 IFT57Q9NWB7 429 aa10.09□□□□□ -0.79
LINC00943-206ENST00000540250 KIAA0232Q92628 1395 aa10.09□□□□□ -0.79
LINC00943-206ENST00000540250 COL16A1Q07092 1604 aaPredicted RBP10.08□□□□□ -0.8
LINC00943-206ENST00000540250 VIRMAQ69YN4 1812 aaKnown RBP10.08□□□□□ -0.8
LINC00943-206ENST00000540250 MMP20O60882 483 aa10.08□□□□□ -0.8
LINC00943-206ENST00000540250 GNAI1P63096 354 aa10.08□□□□□ -0.8
LINC00943-206ENST00000540250 SETDB1Q15047 1291 aa10.08□□□□□ -0.8
LINC00943-206ENST00000540250 Q6ZS46 218 aa10.08□□□□□ -0.8
LINC00943-206ENST00000540250 RGL4Q8IZJ4 473 aa10.08□□□□□ -0.8
LINC00943-206ENST00000540250 CMTR1Q8N1G2 835 aaKnown RBP10.08□□□□□ -0.8
LINC00943-206ENST00000540250 USHBP1Q8N6Y0 703 aa10.08□□□□□ -0.8
LINC00943-206ENST00000540250 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.08□□□□□ -0.8
LINC00943-206ENST00000540250 TSR2Q969E8 191 aaKnown RBP10.08□□□□□ -0.8
LINC00943-206ENST00000540250 LRRC59Q96AG4 307 aaKnown RBP10.08□□□□□ -0.8
LINC00943-206ENST00000540250 THUMPD2Q9BTF0 503 aaKnown RBP10.08□□□□□ -0.8
LINC00943-206ENST00000540250 LRFN2Q9ULH4 789 aa10.08□□□□□ -0.8
LINC00943-206ENST00000540250 MAP3K5Q99683 1374 aa10.08□□□□□ -0.8
LINC00943-206ENST00000540250 FAM83GA6ND36 823 aa10.07□□□□□ -0.8
LINC00943-206ENST00000540250 HTATSF1O43719 755 aaKnown RBP10.07□□□□□ -0.8
LINC00943-206ENST00000540250 GHRHP01286 108 aa10.07□□□□□ -0.8
LINC00943-206ENST00000540250 PSAPP07602 524 aa10.07□□□□□ -0.8
LINC00943-206ENST00000540250 ZNF853P0CG23 659 aa10.07□□□□□ -0.8
LINC00943-206ENST00000540250 PPP4R2Q9NY27 417 aa10.07□□□□□ -0.8
LINC00943-206ENST00000540250 CRB1P82279 1406 aa10.07□□□□□ -0.8
LINC00943-206ENST00000540250 PLEKHG2Q9H7P9 1386 aa10.06□□□□□ -0.8
LINC00943-206ENST00000540250 PRMT3O60678 531 aa10.06□□□□□ -0.8
LINC00943-206ENST00000540250 MED26O95402 600 aa10.06□□□□□ -0.8
LINC00943-206ENST00000540250 GLB1P16278 677 aa10.06□□□□□ -0.8
LINC00943-206ENST00000540250 EXOSC9Q06265 439 aaKnown RBP10.06□□□□□ -0.8
LINC00943-206ENST00000540250 DCTN1Q14203 1278 aa10.06□□□□□ -0.8
LINC00943-206ENST00000540250 TREML1Q86YW5 311 aa10.06□□□□□ -0.8
LINC00943-206ENST00000540250 RTF1Q92541 710 aaKnown RBP10.06□□□□□ -0.8
LINC00943-206ENST00000540250 SRA1Q9HD15 236 aaKnown RBP10.06□□□□□ -0.8
LINC00943-206ENST00000540250 LAS1LQ9Y4W2 734 aaKnown RBP10.06□□□□□ -0.8
LINC00943-206ENST00000540250 KCNMB2Q9Y691 235 aa10.06□□□□□ -0.8
LINC00943-206ENST00000540250 PKD1L3Q7Z443 1732 aa10.06□□□□□ -0.8
LINC00943-206ENST00000540250 PARP4Q9UKK3 1724 aaKnown RBP10.06□□□□□ -0.8
LINC00943-206ENST00000540250 COL14A1Q05707 1796 aaKnown RBP10.06□□□□□ -0.8
LINC00943-206ENST00000540250 COL5A2P05997 1499 aaPredicted RBP10.05□□□□□ -0.8
LINC00943-206ENST00000540250 GNAT3A8MTJ3 354 aa10.05□□□□□ -0.8
LINC00943-206ENST00000540250 PLIN1O60240 522 aa10.05□□□□□ -0.8
LINC00943-206ENST00000540250 BCAR3O75815 825 aa10.05□□□□□ -0.8
LINC00943-206ENST00000540250 RARSP54136 660 aaKnown RBP10.05□□□□□ -0.8
LINC00943-206ENST00000540250 CHRNA2Q15822 529 aa10.05□□□□□ -0.8
LINC00943-206ENST00000540250 MCM10Q7L590 875 aa10.05□□□□□ -0.8
LINC00943-206ENST00000540250 PRDM11Q9NQV5 511 aa10.05□□□□□ -0.8
LINC00943-206ENST00000540250 CXXC1Q9P0U4 656 aaPredicted RBP10.05□□□□□ -0.8
LINC00943-206ENST00000540250 TRIM33Q9UPN9 1127 aa10.05□□□□□ -0.8
LINC00943-206ENST00000540250 RAXQ9Y2V3 346 aa10.05□□□□□ -0.8
LINC00943-206ENST00000540250 ADAMTS7Q9UKP4 1686 aa10.05□□□□□ -0.8
LINC00943-206ENST00000540250 SOWAHDA6NJG2 315 aa10.04□□□□□ -0.8
LINC00943-206ENST00000540250 PAX4O43316 350 aa10.04□□□□□ -0.8
LINC00943-206ENST00000540250 HOXD8P13378 290 aaPredicted RBP10.04□□□□□ -0.8
LINC00943-206ENST00000540250 RBM25P49756 843 aaKnown RBP10.04□□□□□ -0.8
LINC00943-206ENST00000540250 AMOTQ4VCS5 1084 aa10.04□□□□□ -0.8
LINC00943-206ENST00000540250 MAP4K3Q8IVH8 894 aa10.04□□□□□ -0.8
LINC00943-206ENST00000540250 KRTAP4-8A0A0G2JLE6 195 aa10.03□□□□□ -0.8
LINC00943-206ENST00000540250 OVOS2A0A0G2JMS6 1433 aa10.03□□□□□ -0.8
LINC00943-206ENST00000540250 TOM1O60784 492 aa10.03□□□□□ -0.8
LINC00943-206ENST00000540250 PTCD1O75127 700 aaKnown RBP10.03□□□□□ -0.8
LINC00943-206ENST00000540250 SERPINB4P48594 390 aa10.03□□□□□ -0.8
LINC00943-206ENST00000540250 OCLNQ16625 522 aa10.03□□□□□ -0.8
LINC00943-206ENST00000540250 PLEKHO1Q53GL0 409 aaPredicted RBP10.03□□□□□ -0.8
LINC00943-206ENST00000540250 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.03□□□□□ -0.8
LINC00943-206ENST00000540250 ZNF428Q96B54 188 aa10.03□□□□□ -0.8
LINC00943-206ENST00000540250 PRIMPOLQ96LW4 560 aa10.03□□□□□ -0.8
LINC00943-206ENST00000540250 UBL7Q96S82 380 aaPredicted RBP10.03□□□□□ -0.8
LINC00943-206ENST00000540250 RBSNQ9H1K0 784 aa10.03□□□□□ -0.8
LINC00943-206ENST00000540250 NLRP2Q9NX02 1062 aa10.03□□□□□ -0.8
LINC00943-206ENST00000540250 KDM3BQ7LBC6 1761 aa10.03□□□□□ -0.8
LINC00943-206ENST00000540250 PLCH1Q4KWH8 1693 aa10.02□□□□□ -0.8
LINC00943-206ENST00000540250 MEGF6O75095 1541 aa10.02□□□□□ -0.8
LINC00943-206ENST00000540250 SIPA1L3O60292 1781 aaPredicted RBP10.02□□□□□ -0.81
LINC00943-206ENST00000540250 CHL1O00533 1208 aa10.02□□□□□ -0.81
LINC00943-206ENST00000540250 TGFB1P01137 390 aa10.02□□□□□ -0.81
LINC00943-206ENST00000540250 IGLV1-40P01703 118 aa10.02□□□□□ -0.81
LINC00943-206ENST00000540250 CANXP27824 592 aaKnown RBP10.02□□□□□ -0.81
LINC00943-206ENST00000540250 SOX18P35713 384 aa10.02□□□□□ -0.81
LINC00943-206ENST00000540250 ZNF530Q6P9A1 599 aaPredicted RBP10.02□□□□□ -0.81
LINC00943-206ENST00000540250 EXOC6Q8TAG9 804 aa10.02□□□□□ -0.81
LINC00943-206ENST00000540250 WDR17Q8IZU2 1322 aa10.02□□□□□ -0.81
LINC00943-206ENST00000540250 CEMIPQ8WUJ3 1361 aa10.01□□□□□ -0.81
LINC00943-206ENST00000540250 SCN11AQ9UI33 1791 aa10.01□□□□□ -0.81
LINC00943-206ENST00000540250 IRAK1P51617 712 aa10.01□□□□□ -0.81
LINC00943-206ENST00000540250 PDE3AQ14432 1141 aa10.01□□□□□ -0.81
LINC00943-206ENST00000540250 ALDH1L2Q3SY69 923 aa10.01□□□□□ -0.81
LINC00943-206ENST00000540250 AKAP4Q5JQC9 854 aa10.01□□□□□ -0.81
LINC00943-206ENST00000540250 C20orf194Q5TEA3 1177 aa10.01□□□□□ -0.81
LINC00943-206ENST00000540250 GALNT11Q8NCW6 608 aa10.01□□□□□ -0.81
LINC00943-206ENST00000540250 RAPGEF4Q8WZA2 1011 aa10.01□□□□□ -0.81
LINC00943-206ENST00000540250 CRBNQ96SW2 442 aa10.01□□□□□ -0.81
LINC00943-206ENST00000540250 SMC4Q9NTJ3 1288 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms