RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 TSNAXIP1Q2TAA8 658 aa12.35□□□□□ -0.43
PBX1-212ENST00000540236 KRT71Q3SY84 523 aa12.35□□□□□ -0.43
PBX1-212ENST00000540236 OR2W6PQ8NHA6 318 aa12.35□□□□□ -0.43
PBX1-212ENST00000540236 GDAP1Q8TB36 358 aa12.35□□□□□ -0.43
PBX1-212ENST00000540236 PYGLP06737 847 aa12.35□□□□□ -0.43
PBX1-212ENST00000540236 FAM114A1Q8IWE2 563 aa12.35□□□□□ -0.43
PBX1-212ENST00000540236 SMCR8Q8TEV9 937 aaPredicted RBP12.35□□□□□ -0.43
PBX1-212ENST00000540236 CTNNBL1Q8WYA6 563 aaPredicted RBP12.35□□□□□ -0.43
PBX1-212ENST00000540236 ELAC2Q9BQ52 826 aaKnown RBP12.35□□□□□ -0.43
PBX1-212ENST00000540236 MMRN2Q9H8L6 949 aa12.35□□□□□ -0.43
PBX1-212ENST00000540236 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.35□□□□□ -0.43
PBX1-212ENST00000540236 TRPC6Q9Y210 931 aa12.35□□□□□ -0.43
PBX1-212ENST00000540236 KRT14P02533 472 aa12.35□□□□□ -0.43
PBX1-212ENST00000540236 NBPF20Q3BBV1 942 aa12.35□□□□□ -0.43
PBX1-212ENST00000540236 TMEM154Q6P9G4 183 aa12.35□□□□□ -0.43
PBX1-212ENST00000540236 MLXIPLQ9NP71 852 aa12.35□□□□□ -0.43
PBX1-212ENST00000540236 PLAAQ9Y263 795 aa12.35□□□□□ -0.43
PBX1-212ENST00000540236 UHRF1BP1Q6BDS2 1440 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 ABCC4O15439 1325 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 SOS1Q07889 1333 aaPredicted RBP12.34□□□□□ -0.43
PBX1-212ENST00000540236 NCK2O43639 380 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 CASP1P29466 404 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 RWDD2BP57060 319 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 COG7P83436 770 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 PHKBQ93100 1093 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 MYL10Q9BUA6 226 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 NOP53Q9NZM5 478 aaKnown RBP12.34□□□□□ -0.43
PBX1-212ENST00000540236 STX10O60499 249 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 CFAP157Q5JU67 520 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 INTS8Q75QN2 995 aaKnown RBP12.34□□□□□ -0.43
PBX1-212ENST00000540236 CCDC42Q96M95 316 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 OSBPL5Q9H0X9 879 aaPredicted RBP12.34□□□□□ -0.43
PBX1-212ENST00000540236 PHAXQ9H814 394 aaKnown RBP12.34□□□□□ -0.43
PBX1-212ENST00000540236 NOD2Q9HC29 1040 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 ZSWIM6Q9HCJ5 1215 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 A0A1W2PRG0 241 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 PAK2Q13177 524 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 SLC4A8Q2Y0W8 1093 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 FGD4Q96M96 766 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 FAM184BQ9ULE4 1060 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 A0A0D9SFI3 127 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 HIP1RO75146 1068 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 LUC7L3O95232 432 aaKnown RBP12.34□□□□□ -0.43
PBX1-212ENST00000540236 RESTQ13127 1097 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 ECT2Q9H8V3 914 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 FOXN1O15353 648 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 ANP32DO95626 131 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 CDC25AP30304 524 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 SLCO1A2P46721 670 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 CCDC93Q567U6 631 aa12.34□□□□□ -0.43
PBX1-212ENST00000540236 NUTM2AQ8IVF1 878 aaPredicted RBP12.34□□□□□ -0.43
PBX1-212ENST00000540236 LUC7L2Q9Y383 392 aaKnown RBP12.34□□□□□ -0.43
PBX1-212ENST00000540236 U3KPZ7 1027 aaPredicted RBP12.34□□□□□ -0.43
PBX1-212ENST00000540236 RAD21O60216 631 aa12.33□□□□□ -0.44
PBX1-212ENST00000540236 BAG2O95816 211 aa12.33□□□□□ -0.44
PBX1-212ENST00000540236 KRT83P78385 493 aa12.33□□□□□ -0.44
PBX1-212ENST00000540236 SSRP1Q08945 709 aaKnown RBP12.33□□□□□ -0.44
PBX1-212ENST00000540236 SLC17A8Q8NDX2 589 aa12.33□□□□□ -0.44
PBX1-212ENST00000540236 CTAGE1Q96RT6 745 aa12.33□□□□□ -0.44
PBX1-212ENST00000540236 WWC3Q9ULE0 1092 aa12.33□□□□□ -0.44
PBX1-212ENST00000540236 TEX33O43247 280 aa12.33□□□□□ -0.44
PBX1-212ENST00000540236 PIP4K2AP48426 406 aaPredicted RBP12.33□□□□□ -0.44
PBX1-212ENST00000540236 SCNN1BP51168 640 aa12.33□□□□□ -0.44
PBX1-212ENST00000540236 OTUD6AQ7L8S5 288 aa12.33□□□□□ -0.44
PBX1-212ENST00000540236 TRIM74Q86UV6 250 aa12.33□□□□□ -0.44
PBX1-212ENST00000540236 TRIM73Q86UV7 250 aa12.33□□□□□ -0.44
PBX1-212ENST00000540236 CCDC197Q8NCU1 140 aa12.33□□□□□ -0.44
PBX1-212ENST00000540236 DDX20Q9UHI6 824 aaKnown RBP12.33□□□□□ -0.44
PBX1-212ENST00000540236 GOLGA8AA7E2F4 631 aa12.33□□□□□ -0.44
PBX1-212ENST00000540236 HNRNPCP07910 306 aaKnown RBP eCLIP12.33□□□□□ -0.44
PBX1-212ENST00000540236 NBPF3Q9H094 633 aa12.33□□□□□ -0.44
PBX1-212ENST00000540236 METAP2P50579 478 aaKnown RBP eCLIP12.33□□□□□ -0.44
PBX1-212ENST00000540236 POSTNQ15063 836 aa12.33□□□□□ -0.44
PBX1-212ENST00000540236 CMTR1Q8N1G2 835 aaKnown RBP12.33□□□□□ -0.44
PBX1-212ENST00000540236 ZC3H18Q86VM9 953 aaKnown RBP12.32□□□□□ -0.44
PBX1-212ENST00000540236 SPATS2Q86XZ4 545 aaKnown RBP12.32□□□□□ -0.44
PBX1-212ENST00000540236 CCT8L2Q96SF2 557 aa12.32□□□□□ -0.44
PBX1-212ENST00000540236 A2MP01023 1474 aa12.32□□□□□ -0.44
PBX1-212ENST00000540236 EAPPQ56P03 285 aaPredicted RBP12.32□□□□□ -0.44
PBX1-212ENST00000540236 NBPF14Q5TI25 921 aa12.32□□□□□ -0.44
PBX1-212ENST00000540236 NAA35Q5VZE5 725 aa12.32□□□□□ -0.44
PBX1-212ENST00000540236 ARL8AQ96BM9 186 aa12.32□□□□□ -0.44
PBX1-212ENST00000540236 VSIG1Q86XK7 387 aa12.32□□□□□ -0.44
PBX1-212ENST00000540236 PRCCQ92733 491 aaPredicted RBP12.32□□□□□ -0.44
PBX1-212ENST00000540236 TSPY2A6NKD2 308 aa12.32□□□□□ -0.44
PBX1-212ENST00000540236 TSPY3P0CV98 308 aa12.32□□□□□ -0.44
PBX1-212ENST00000540236 TSPY8P0CW00 308 aa12.32□□□□□ -0.44
PBX1-212ENST00000540236 TSPY1Q01534 308 aa12.32□□□□□ -0.44
PBX1-212ENST00000540236 MARCH10Q8NA82 808 aaPredicted RBP12.32□□□□□ -0.44
PBX1-212ENST00000540236 VCPKMTQ9H867 229 aa12.32□□□□□ -0.44
PBX1-212ENST00000540236 EHD2Q9NZN4 543 aa12.32□□□□□ -0.44
PBX1-212ENST00000540236 TTC21BQ7Z4L5 1316 aa12.32□□□□□ -0.44
PBX1-212ENST00000540236 ECEL1O95672 775 aa12.32□□□□□ -0.44
PBX1-212ENST00000540236 NEXNQ0ZGT2 675 aa12.32□□□□□ -0.44
PBX1-212ENST00000540236 SYNMO15061 1565 aa12.32□□□□□ -0.44
PBX1-212ENST00000540236 KCNV1Q6PIU1 500 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 CEP70Q8NHQ1 597 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 CEP63Q96MT8 703 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 TRIM7Q9C029 511 aa12.31□□□□□ -0.44
PBX1-212ENST00000540236 ACTR5Q9H9F9 607 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms