RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 GPR153Q6NV75 609 aa24.52■■□□□ 1.52
LPCAT3-210ENST00000540090 SOCS4Q8WXH5 440 aa24.52■■□□□ 1.52
LPCAT3-210ENST00000540090 RBPJLQ9UBG7 517 aa24.52■■□□□ 1.52
LPCAT3-210ENST00000540090 USP17L10C9JJH3 530 aa24.51■■□□□ 1.51
LPCAT3-210ENST00000540090 IPO8O15397 1037 aaKnown RBP24.51■■□□□ 1.51
LPCAT3-210ENST00000540090 PEX10O60683 326 aa24.51■■□□□ 1.51
LPCAT3-210ENST00000540090 TRIM27P14373 513 aa24.51■■□□□ 1.51
LPCAT3-210ENST00000540090 MAPKAPK5Q8IW41 473 aa24.51■■□□□ 1.51
LPCAT3-210ENST00000540090 GPR108Q9NPR9 543 aa24.51■■□□□ 1.51
LPCAT3-210ENST00000540090 SNRKQ9NRH2 765 aa24.51■■□□□ 1.51
LPCAT3-210ENST00000540090 DLL1O00548 723 aa24.5■■□□□ 1.51
LPCAT3-210ENST00000540090 PRKAR2AP13861 404 aaKnown RBP24.5■■□□□ 1.51
LPCAT3-210ENST00000540090 MAPK4P31152 587 aa24.5■■□□□ 1.51
LPCAT3-210ENST00000540090 Q3C1V9 767 aa24.5■■□□□ 1.51
LPCAT3-210ENST00000540090 TRMT44Q8IYL2 757 aaKnown RBP24.5■■□□□ 1.51
LPCAT3-210ENST00000540090 USP6NLQ92738 828 aa24.5■■□□□ 1.51
LPCAT3-210ENST00000540090 PALD1Q9ULE6 856 aa24.5■■□□□ 1.51
LPCAT3-210ENST00000540090 ALPK3Q96L96 1907 aa24.5■■□□□ 1.51
LPCAT3-210ENST00000540090 FLT1P17948 1338 aa24.5■■□□□ 1.51
LPCAT3-210ENST00000540090 IGSF3O75054 1194 aa24.49■■□□□ 1.51
LPCAT3-210ENST00000540090 SHROOM1Q2M3G4 852 aaPredicted RBP24.49■■□□□ 1.51
LPCAT3-210ENST00000540090 TTC39AQ5SRH9 613 aa24.49■■□□□ 1.51
LPCAT3-210ENST00000540090 ADGRA1Q86SQ6 560 aa24.49■■□□□ 1.51
LPCAT3-210ENST00000540090 CRACR2BQ8N4Y2 399 aaPredicted RBP24.49■■□□□ 1.51
LPCAT3-210ENST00000540090 CYP2E1P05181 493 aaPredicted RBP24.48■■□□□ 1.51
LPCAT3-210ENST00000540090 SYN1P17600 705 aa24.48■■□□□ 1.51
LPCAT3-210ENST00000540090 MAGEA10P43363 369 aaPredicted RBP24.48■■□□□ 1.51
LPCAT3-210ENST00000540090 ERVK-9P63128 1117 aa24.48■■□□□ 1.51
LPCAT3-210ENST00000540090 ERVK-24P63145 666 aa24.48■■□□□ 1.51
LPCAT3-210ENST00000540090 LRIT3Q3SXY7 679 aa24.48■■□□□ 1.51
LPCAT3-210ENST00000540090 TNNI3KQ59H18 835 aa24.48■■□□□ 1.51
LPCAT3-210ENST00000540090 CCDC158Q5M9N0 1113 aa24.48■■□□□ 1.51
LPCAT3-210ENST00000540090 ATF7IPQ6VMQ6 1270 aa24.48■■□□□ 1.51
LPCAT3-210ENST00000540090 ZBTB21Q9ULJ3 1066 aa24.48■■□□□ 1.51
LPCAT3-210ENST00000540090 FPGT-TNNI3KV9GXZ4 949 aa24.48■■□□□ 1.51
LPCAT3-210ENST00000540090 ATAD5Q96QE3 1844 aa24.47■■□□□ 1.51
LPCAT3-210ENST00000540090 PFASO15067 1338 aa24.47■■□□□ 1.51
LPCAT3-210ENST00000540090 GDF11O95390 407 aa24.47■■□□□ 1.51
LPCAT3-210ENST00000540090 CACNB2Q08289 660 aaPredicted RBP24.47■■□□□ 1.51
LPCAT3-210ENST00000540090 PDE3AQ14432 1141 aa24.47■■□□□ 1.51
LPCAT3-210ENST00000540090 POTEEQ6S8J3 1075 aa24.47■■□□□ 1.51
LPCAT3-210ENST00000540090 GTF3C2Q8WUA4 911 aaPredicted RBP24.47■■□□□ 1.51
LPCAT3-210ENST00000540090 ZNF512BQ96KM6 892 aaPredicted RBP24.47■■□□□ 1.51
LPCAT3-210ENST00000540090 DBNDD2Q9BQY9 259 aa24.47■■□□□ 1.51
LPCAT3-210ENST00000540090 TRIM34Q9BYJ4 488 aa24.47■■□□□ 1.51
LPCAT3-210ENST00000540090 EMILIN3Q9NT22 766 aa24.47■■□□□ 1.51
LPCAT3-210ENST00000540090 TNNQ9UQP3 1299 aa24.47■■□□□ 1.51
LPCAT3-210ENST00000540090 COL6A1P12109 1028 aa24.46■■□□□ 1.51
LPCAT3-210ENST00000540090 POLA2Q14181 598 aa24.46■■□□□ 1.51
LPCAT3-210ENST00000540090 MORN1Q5T089 497 aa24.46■■□□□ 1.51
LPCAT3-210ENST00000540090 PORCNQ9H237 461 aa24.46■■□□□ 1.51
LPCAT3-210ENST00000540090 PLXNB2O15031 1838 aa24.46■■□□□ 1.51
LPCAT3-210ENST00000540090 ZKSCAN1P17029 563 aaPredicted RBP24.45■■□□□ 1.5
LPCAT3-210ENST00000540090 RGS2P41220 211 aa24.45■■□□□ 1.5
LPCAT3-210ENST00000540090 LHX8Q68G74 356 aa24.45■■□□□ 1.5
LPCAT3-210ENST00000540090 USP17L2Q6R6M4 530 aa24.45■■□□□ 1.5
LPCAT3-210ENST00000540090 GPR142Q7Z601 462 aa24.45■■□□□ 1.5
LPCAT3-210ENST00000540090 CCAR1Q8IX12 1150 aaKnown RBP24.45■■□□□ 1.5
LPCAT3-210ENST00000540090 TDHQ8IZJ6 230 aa24.45■■□□□ 1.5
LPCAT3-210ENST00000540090 HLA-DOAP06340 250 aa24.44■■□□□ 1.5
LPCAT3-210ENST00000540090 PLEKHH3Q7Z736 793 aa24.44■■□□□ 1.5
LPCAT3-210ENST00000540090 DEFB123Q8N688 67 aa24.44■■□□□ 1.5
LPCAT3-210ENST00000540090 SAP30BPQ9UHR5 308 aaKnown RBP24.44■■□□□ 1.5
LPCAT3-210ENST00000540090 SIPA1L1O43166 1804 aa24.44■■□□□ 1.5
LPCAT3-210ENST00000540090 BCAR3O75815 825 aa24.43■■□□□ 1.5
LPCAT3-210ENST00000540090 CCND3P30281 292 aaPredicted RBP24.43■■□□□ 1.5
LPCAT3-210ENST00000540090 ZAP70P43403 619 aa24.43■■□□□ 1.5
LPCAT3-210ENST00000540090 CCL14Q16627 93 aa24.43■■□□□ 1.5
LPCAT3-210ENST00000540090 SSH3Q8TE77 659 aa24.43■■□□□ 1.5
LPCAT3-210ENST00000540090 FRAT1Q92837 279 aaPredicted RBP24.43■■□□□ 1.5
LPCAT3-210ENST00000540090 CLUAP1Q96AJ1 413 aa24.43■■□□□ 1.5
LPCAT3-210ENST00000540090 PAGR1Q9BTK6 254 aa24.43■■□□□ 1.5
LPCAT3-210ENST00000540090 PIH1D3Q9NQM4 214 aaKnown RBP24.43■■□□□ 1.5
LPCAT3-210ENST00000540090 DYNLL1P63167 89 aaKnown RBP24.42■■□□□ 1.5
LPCAT3-210ENST00000540090 ATP8B2P98198 1209 aa24.42■■□□□ 1.5
LPCAT3-210ENST00000540090 C12orf42Q96LP6 360 aa24.42■■□□□ 1.5
LPCAT3-210ENST00000540090 UBE2OQ9C0C9 1292 aaKnown RBP24.42■■□□□ 1.5
LPCAT3-210ENST00000540090 DDX60LQ5H9U9 1706 aaKnown RBP24.41■■□□□ 1.5
LPCAT3-210ENST00000540090 GH2P01242 217 aa24.41■■□□□ 1.5
LPCAT3-210ENST00000540090 OS9Q13438 667 aaPredicted RBP24.41■■□□□ 1.5
LPCAT3-210ENST00000540090 TATDN1Q6P1N9 297 aa24.41■■□□□ 1.5
LPCAT3-210ENST00000540090 APBA2Q99767 749 aa24.41■■□□□ 1.5
LPCAT3-210ENST00000540090 RABGAP1Q9Y3P9 1069 aa24.41■■□□□ 1.5
LPCAT3-210ENST00000540090 SURF6O75683 361 aaKnown RBP24.4■■□□□ 1.5
LPCAT3-210ENST00000540090 CYP7A1P22680 504 aa24.4■■□□□ 1.5
LPCAT3-210ENST00000540090 MAP2K5Q13163 448 aa24.4■■□□□ 1.5
LPCAT3-210ENST00000540090 Q7L0L9 218 aa24.4■■□□□ 1.5
LPCAT3-210ENST00000540090 TMEM57Q8N5G2 664 aa24.4■■□□□ 1.5
LPCAT3-210ENST00000540090 USP17L15C9J2P7 530 aa24.39■■□□□ 1.49
LPCAT3-210ENST00000540090 USP17L13C9JLJ4 530 aa24.39■■□□□ 1.49
LPCAT3-210ENST00000540090 USP17L11C9JVI0 530 aa24.39■■□□□ 1.49
LPCAT3-210ENST00000540090 USP17L18D6R9N7 530 aa24.39■■□□□ 1.49
LPCAT3-210ENST00000540090 USP17L22D6RA61 530 aa24.39■■□□□ 1.49
LPCAT3-210ENST00000540090 USP17L17D6RBQ6 530 aa24.39■■□□□ 1.49
LPCAT3-210ENST00000540090 USP17L19D6RCP7 530 aa24.39■■□□□ 1.49
LPCAT3-210ENST00000540090 USP17L20D6RJB6 530 aa24.39■■□□□ 1.49
LPCAT3-210ENST00000540090 CNMDO75829 334 aa24.39■■□□□ 1.49
LPCAT3-210ENST00000540090 USP17L24Q0WX57 530 aa24.39■■□□□ 1.49
LPCAT3-210ENST00000540090 LRRC26Q2I0M4 334 aa24.39■■□□□ 1.49
LPCAT3-210ENST00000540090 EDC3Q96F86 508 aaKnown RBP24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms