RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 WRNIP1Q96S55 665 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 EHD4Q9H223 541 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 DIAPH3Q9NSV4 1193 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 MCM9Q9NXL9 1143 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 PI4KBQ9UBF8 816 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 ARPP21Q9UBL0 812 aaPredicted RBP8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 HERC5Q9UII4 1024 aaKnown RBP8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 ZNF112Q9UJU3 913 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 MYH4Q9Y623 1939 aa8.37□□□□□ -1.07
LPCAT3-209ENST00000540060 ZMYM6O95789 1325 aa8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 RAD50Q92878 1312 aa8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 CYP2D6P10635 497 aa8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 INPP5BP32019 993 aa8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 VEGFBP49765 207 aa8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 PLCD1P51178 756 aa8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 ZNF157P51786 506 aaPredicted RBP8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 NOL9Q5SY16 702 aaKnown RBP8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 VPS53Q5VIR6 699 aa8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 GIMAP6Q6P9H5 292 aa8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 CWC27Q6UX04 472 aaKnown RBP8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 TTC6Q86TZ1 520 aa8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 ZKSCAN4Q969J2 545 aaPredicted RBP8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 CAPNS2Q96L46 248 aa8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 IL25Q9H293 177 aa8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 SERPINB13Q9UIV8 391 aa8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 SNCAIPQ9Y6H5 919 aa8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 PARP14Q460N5 1801 aa8.36□□□□□ -1.07
LPCAT3-209ENST00000540060 WDR33Q9C0J8 1336 aaKnown RBP8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 CYP2D7A0A087X1C5 515 aa8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 PATL2C9JE40 543 aaKnown RBP8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 USP17L12C9JPN9 530 aa8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 USP17L21D6R901 530 aa8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 SMIM22K7EJ46 135 aa8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 POLR3DP05423 398 aaPredicted RBP8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 CHMLP26374 656 aa8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 ECE1P42892 770 aa8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 MAP3K9P80192 1104 aa8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 GABPAQ06546 454 aa8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 RRP1BQ14684 758 aaKnown RBP8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 SBK1Q52WX2 424 aa8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 C12orf60Q5U649 245 aa8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 CTR9Q6PD62 1173 aa8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 PAXIP1Q6ZW49 1069 aaPredicted RBP8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 FOXP4Q8IVH2 680 aaPredicted RBP8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 IFNL3Q8IZI9 196 aa8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 CRACR2BQ8N4Y2 399 aaPredicted RBP8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 DDRGK1Q96HY6 314 aa8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 WNK4Q96J92 1243 aa8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 ELP3Q9H9T3 547 aa8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 CSADQ9Y600 493 aa8.35□□□□□ -1.07
LPCAT3-209ENST00000540060 SPDYE5A6NIY4 337 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 CTNND1O60716 968 aaKnown RBP8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 AOC2O75106 756 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 ZBTB48P10074 688 aaPredicted RBP8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 HSPD1P10809 573 aaKnown RBP8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 SHMT1P34896 483 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 GJA5P36382 358 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 TDO2P48775 406 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 MFAP1P55081 439 aaKnown RBP8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 NOGQ13253 232 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 GRM1Q13255 1194 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 SPRYD7Q5W111 196 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 TATDN1Q6P1N9 297 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 C16orf86Q6ZW13 317 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 AMOTL1Q8IY63 956 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 SCYL3Q8IZE3 742 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 CCDC102AQ96A19 550 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 OPTNQ96CV9 577 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 TRIM34Q9BYJ4 488 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 NACAP1Q9BZK3 213 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 NAPBQ9H115 298 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 TSPYL2Q9H2G4 693 aaPredicted RBP8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 TAOK2Q9UL54 1235 aa8.34□□□□□ -1.07
LPCAT3-209ENST00000540060 SGSM2O43147 1006 aa8.33□□□□□ -1.08
LPCAT3-209ENST00000540060 APPP05067 770 aa8.33□□□□□ -1.08
LPCAT3-209ENST00000540060 CAP2P40123 477 aa8.33□□□□□ -1.08
LPCAT3-209ENST00000540060 JAG1P78504 1218 aa8.33□□□□□ -1.08
LPCAT3-209ENST00000540060 PPIL2Q13356 520 aa8.33□□□□□ -1.08
LPCAT3-209ENST00000540060 ALX1Q15699 326 aa8.33□□□□□ -1.08
LPCAT3-209ENST00000540060 SHROOM1Q2M3G4 852 aaPredicted RBP8.33□□□□□ -1.08
LPCAT3-209ENST00000540060 ERO1BQ86YB8 467 aa8.33□□□□□ -1.08
LPCAT3-209ENST00000540060 JMYQ8N9B5 988 aa8.33□□□□□ -1.08
LPCAT3-209ENST00000540060 SLC44A5Q8NCS7 719 aa8.33□□□□□ -1.08
LPCAT3-209ENST00000540060 SLC10A4Q96EP9 437 aa8.33□□□□□ -1.08
LPCAT3-209ENST00000540060 DYNLL2Q96FJ2 89 aa8.33□□□□□ -1.08
LPCAT3-209ENST00000540060 ZIC5Q96T25 663 aa8.33□□□□□ -1.08
LPCAT3-209ENST00000540060 SWAP70Q9UH65 585 aa8.33□□□□□ -1.08
LPCAT3-209ENST00000540060 A0A0G2JMZ2 1700 aa8.32□□□□□ -1.08
LPCAT3-209ENST00000540060 MINDY4BA8MYZ0 360 aa8.32□□□□□ -1.08
LPCAT3-209ENST00000540060 MAP3K13O43283 966 aa8.32□□□□□ -1.08
LPCAT3-209ENST00000540060 CDC45O75419 566 aa8.32□□□□□ -1.08
LPCAT3-209ENST00000540060 GDF11O95390 407 aa8.32□□□□□ -1.08
LPCAT3-209ENST00000540060 FGAP02671 866 aa8.32□□□□□ -1.08
LPCAT3-209ENST00000540060 PTPRAP18433 802 aa8.32□□□□□ -1.08
LPCAT3-209ENST00000540060 MAP2K2P36507 400 aa8.32□□□□□ -1.08
LPCAT3-209ENST00000540060 PPATQ06203 517 aa8.32□□□□□ -1.08
LPCAT3-209ENST00000540060 PPARAQ07869 468 aa8.32□□□□□ -1.08
LPCAT3-209ENST00000540060 MKRN3Q13064 507 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms