RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 LRMPQ12912 555 aa11.38□□□□□ -0.59
TRAF1-202ENST00000540010 GRAPQ13588 217 aa11.38□□□□□ -0.59
TRAF1-202ENST00000540010 KARSQ15046 597 aaKnown RBP11.38□□□□□ -0.59
TRAF1-202ENST00000540010 SPA17Q15506 151 aa11.38□□□□□ -0.59
TRAF1-202ENST00000540010 TAX1BP1Q86VP1 789 aa11.38□□□□□ -0.59
TRAF1-202ENST00000540010 GRAPLQ8TC17 118 aaPredicted RBP11.38□□□□□ -0.59
TRAF1-202ENST00000540010 GSG1L2A8MUP6 293 aa11.37□□□□□ -0.59
TRAF1-202ENST00000540010 NLRP5P59047 1200 aa11.37□□□□□ -0.59
TRAF1-202ENST00000540010 DYNLL1P63167 89 aaKnown RBP11.37□□□□□ -0.59
TRAF1-202ENST00000540010 WTAPQ15007 396 aa11.37□□□□□ -0.59
TRAF1-202ENST00000540010 SLC27A3Q5K4L6 730 aa11.37□□□□□ -0.59
TRAF1-202ENST00000540010 ZNF804AQ7Z570 1209 aa11.37□□□□□ -0.59
TRAF1-202ENST00000540010 RBM17Q96I25 401 aaKnown RBP11.37□□□□□ -0.59
TRAF1-202ENST00000540010 MYL10Q9BUA6 226 aa11.37□□□□□ -0.59
TRAF1-202ENST00000540010 CRNKL1Q9BZJ0 848 aaKnown RBP11.37□□□□□ -0.59
TRAF1-202ENST00000540010 LUC7LQ9NQ29 371 aaKnown RBP11.37□□□□□ -0.59
TRAF1-202ENST00000540010 AATFQ9NY61 560 aaKnown RBP eCLIP11.37□□□□□ -0.59
TRAF1-202ENST00000540010 SPEF2Q9C093 1822 aa11.37□□□□□ -0.59
TRAF1-202ENST00000540010 UFL1O94874 794 aa11.37□□□□□ -0.59
TRAF1-202ENST00000540010 CYB5R4Q7L1T6 521 aa11.37□□□□□ -0.59
TRAF1-202ENST00000540010 NEDD4P46934 1319 aa11.37□□□□□ -0.59
TRAF1-202ENST00000540010 EPB41L4AQ9HCS5 686 aaPredicted RBP11.37□□□□□ -0.59
TRAF1-202ENST00000540010 LZTFL1Q9NQ48 299 aa11.37□□□□□ -0.59
TRAF1-202ENST00000540010 SEMA3EO15041 775 aa11.36□□□□□ -0.59
TRAF1-202ENST00000540010 ANTXR2P58335 489 aa11.36□□□□□ -0.59
TRAF1-202ENST00000540010 PPARAQ07869 468 aa11.36□□□□□ -0.59
TRAF1-202ENST00000540010 ALX1Q15699 326 aa11.36□□□□□ -0.59
TRAF1-202ENST00000540010 TXNRD1Q16881 649 aa11.36□□□□□ -0.59
TRAF1-202ENST00000540010 PRR5LQ6MZQ0 368 aa11.36□□□□□ -0.59
TRAF1-202ENST00000540010 TTC6Q86TZ1 520 aa11.36□□□□□ -0.59
TRAF1-202ENST00000540010 ESR2Q92731 530 aa11.36□□□□□ -0.59
TRAF1-202ENST00000540010 TIGD1Q96MW7 591 aa11.36□□□□□ -0.59
TRAF1-202ENST00000540010 SEPT11Q9NVA2 429 aaKnown RBP11.36□□□□□ -0.59
TRAF1-202ENST00000540010 TMEM87AQ8NBN3 555 aa11.36□□□□□ -0.59
TRAF1-202ENST00000540010 LEO1Q8WVC0 666 aaPredicted RBP11.36□□□□□ -0.59
TRAF1-202ENST00000540010 CTDP1Q9Y5B0 961 aaPredicted RBP11.36□□□□□ -0.59
TRAF1-202ENST00000540010 LDHBP07195 334 aaKnown RBP11.36□□□□□ -0.59
TRAF1-202ENST00000540010 IDEP14735 1019 aa11.36□□□□□ -0.59
TRAF1-202ENST00000540010 ADD1P35611 737 aaKnown RBP11.36□□□□□ -0.59
TRAF1-202ENST00000540010 CACNA2D4Q7Z3S7 1137 aa11.36□□□□□ -0.59
TRAF1-202ENST00000540010 SMARCC2Q8TAQ2 1214 aa11.36□□□□□ -0.59
TRAF1-202ENST00000540010 MKNK2Q9HBH9 465 aa11.36□□□□□ -0.59
TRAF1-202ENST00000540010 BMP2KQ9NSY1 1161 aaPredicted RBP11.36□□□□□ -0.59
TRAF1-202ENST00000540010 YEATS4O95619 227 aa11.36□□□□□ -0.59
TRAF1-202ENST00000540010 TDRD12Q587J7 1177 aaKnown RBP11.36□□□□□ -0.59
TRAF1-202ENST00000540010 GPR101Q96P66 508 aaPredicted RBP11.36□□□□□ -0.59
TRAF1-202ENST00000540010 ZSWIM5Q9P217 1185 aa11.36□□□□□ -0.59
TRAF1-202ENST00000540010 ONECUT3O60422 494 aaPredicted RBP11.35□□□□□ -0.59
TRAF1-202ENST00000540010 PRDM1O75626 825 aa11.35□□□□□ -0.59
TRAF1-202ENST00000540010 FBXO33Q7Z6M2 555 aa11.35□□□□□ -0.59
TRAF1-202ENST00000540010 ZNF397Q8NF99 534 aaPredicted RBP11.35□□□□□ -0.59
TRAF1-202ENST00000540010 AGXT2Q9BYV1 514 aa11.35□□□□□ -0.59
TRAF1-202ENST00000540010 JADE2Q9NQC1 790 aa11.35□□□□□ -0.59
TRAF1-202ENST00000540010 XDHP47989 1333 aa11.35□□□□□ -0.59
TRAF1-202ENST00000540010 PNPLA7Q6ZV29 1317 aa11.35□□□□□ -0.59
TRAF1-202ENST00000540010 SH2B2O14492 632 aaPredicted RBP11.35□□□□□ -0.59
TRAF1-202ENST00000540010 CTDNEP1O95476 244 aa11.35□□□□□ -0.59
TRAF1-202ENST00000540010 MECOMQ03112 1051 aa11.35□□□□□ -0.59
TRAF1-202ENST00000540010 PUF60Q9UHX1 559 aaKnown RBP11.35□□□□□ -0.59
TRAF1-202ENST00000540010 GGA1Q9UJY5 639 aa11.35□□□□□ -0.59
TRAF1-202ENST00000540010 LEMD3Q9Y2U8 911 aa11.35□□□□□ -0.59
TRAF1-202ENST00000540010 ZNF500O60304 480 aaPredicted RBP11.35□□□□□ -0.59
TRAF1-202ENST00000540010 GYS1P13807 737 aa11.35□□□□□ -0.59
TRAF1-202ENST00000540010 PRDX5P30044 214 aa11.35□□□□□ -0.59
TRAF1-202ENST00000540010 ZNF772Q68DY9 489 aaPredicted RBP11.35□□□□□ -0.59
TRAF1-202ENST00000540010 IQCEQ6IPM2 695 aa11.35□□□□□ -0.59
TRAF1-202ENST00000540010 PHKBQ93100 1093 aa11.35□□□□□ -0.59
TRAF1-202ENST00000540010 CCDC194A0A1B0GVG4 234 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 UBA7P41226 1012 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 MTIF2P46199 727 aaKnown RBP11.34□□□□□ -0.59
TRAF1-202ENST00000540010 APOA5Q6Q788 366 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 WDR66Q8TBY9 1149 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 ATRNO75882 1429 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 RESTQ13127 1097 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 ELF2Q15723 593 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 DHX58Q96C10 678 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 DRC1Q96MC2 740 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 ZMYM6O95789 1325 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 WDR19Q8NEZ3 1342 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 CYP2D7A0A087X1C5 515 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 GOLGA6L9A6NEM1 432 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 USP17L12C9JPN9 530 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 USP17L21D6R901 530 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 ZNF75DP51815 510 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 RBM6P78332 1123 aaKnown RBP11.34□□□□□ -0.59
TRAF1-202ENST00000540010 RTN1Q16799 776 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 MAP9Q49MG5 647 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 ADGRA1Q86SQ6 560 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 TMTC2Q8N394 836 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 VAT1LQ9HCJ6 419 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 FAM160A1Q05DH4 1040 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 CATIPQ7Z7H3 387 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 TAF4BQ92750 862 aa11.34□□□□□ -0.59
TRAF1-202ENST00000540010 GTPBP4Q9BZE4 634 aaKnown RBP11.34□□□□□ -0.59
TRAF1-202ENST00000540010 BAG3O95817 575 aa11.33□□□□□ -0.6
TRAF1-202ENST00000540010 PAFAH1B1P43034 410 aa11.33□□□□□ -0.6
TRAF1-202ENST00000540010 SYCP1Q15431 976 aa11.33□□□□□ -0.6
TRAF1-202ENST00000540010 FKBP15Q5T1M5 1219 aa11.33□□□□□ -0.6
TRAF1-202ENST00000540010 TXNRD3Q86VQ6 643 aa11.33□□□□□ -0.6
TRAF1-202ENST00000540010 NBPF3Q9H094 633 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms