RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 TSPY8P0CW00 308 aa18.98■□□□□ 0.63
TRAF3-204ENST00000539721 STK3Q13188 491 aa18.98■□□□□ 0.63
TRAF3-204ENST00000539721 TNFAIP1Q13829 316 aa18.98■□□□□ 0.63
TRAF3-204ENST00000539721 NFXL1Q6ZNB6 911 aa18.98■□□□□ 0.63
TRAF3-204ENST00000539721 CSRNP1Q96S65 589 aa18.98■□□□□ 0.63
TRAF3-204ENST00000539721 HACL1Q9UJ83 578 aa18.98■□□□□ 0.63
TRAF3-204ENST00000539721 ASTN2O75129 1339 aaPredicted RBP18.98■□□□□ 0.63
TRAF3-204ENST00000539721 LIFRP42702 1097 aa18.98■□□□□ 0.63
TRAF3-204ENST00000539721 FOXP4Q8IVH2 680 aaPredicted RBP18.98■□□□□ 0.63
TRAF3-204ENST00000539721 CCDC83Q8IWF9 413 aa18.98■□□□□ 0.63
TRAF3-204ENST00000539721 SLKQ9H2G2 1235 aaPredicted RBP18.98■□□□□ 0.63
TRAF3-204ENST00000539721 CCDC69A6NI79 296 aa18.97■□□□□ 0.63
TRAF3-204ENST00000539721 EVCP57679 992 aa18.97■□□□□ 0.63
TRAF3-204ENST00000539721 NECAB1Q8N987 351 aa18.97■□□□□ 0.63
TRAF3-204ENST00000539721 ZNF274Q96GC6 653 aaPredicted RBP18.97■□□□□ 0.63
TRAF3-204ENST00000539721 TMEM39BQ9GZU3 492 aa18.97■□□□□ 0.63
TRAF3-204ENST00000539721 SENP2Q9HC62 589 aa18.97■□□□□ 0.63
TRAF3-204ENST00000539721 ADARB2Q9NS39 739 aaKnown RBP18.97■□□□□ 0.63
TRAF3-204ENST00000539721 TAOK2Q9UL54 1235 aa18.97■□□□□ 0.63
TRAF3-204ENST00000539721 BRPF3Q9ULD4 1205 aa18.97■□□□□ 0.63
TRAF3-204ENST00000539721 SHMT1P34896 483 aa18.96■□□□□ 0.63
TRAF3-204ENST00000539721 SEC23AQ15436 765 aa18.96■□□□□ 0.63
TRAF3-204ENST00000539721 SGMS1Q86VZ5 419 aa18.96■□□□□ 0.63
TRAF3-204ENST00000539721 TMTC2Q8N394 836 aa18.96■□□□□ 0.63
TRAF3-204ENST00000539721 ENAHQ8N8S7 591 aaPredicted RBP18.96■□□□□ 0.63
TRAF3-204ENST00000539721 INTS4Q96HW7 963 aaKnown RBP18.96■□□□□ 0.63
TRAF3-204ENST00000539721 DNAJC18Q9H819 358 aa18.96■□□□□ 0.63
TRAF3-204ENST00000539721 GLTPD2A6NH11 291 aa18.96■□□□□ 0.63
TRAF3-204ENST00000539721 GOLGA8BA8MQT2 603 aa18.96■□□□□ 0.63
TRAF3-204ENST00000539721 NMT2O60551 498 aa18.96■□□□□ 0.63
TRAF3-204ENST00000539721 PFKFB2O60825 505 aa18.96■□□□□ 0.63
TRAF3-204ENST00000539721 PDIA3P30101 505 aaKnown RBP18.96■□□□□ 0.63
TRAF3-204ENST00000539721 RASA3Q14644 834 aa18.96■□□□□ 0.63
TRAF3-204ENST00000539721 CCDC178Q5BJE1 867 aa18.96■□□□□ 0.63
TRAF3-204ENST00000539721 L3MBTL3Q96JM7 780 aaPredicted RBP18.96■□□□□ 0.63
TRAF3-204ENST00000539721 SCAF8Q9UPN6 1271 aaKnown RBP18.96■□□□□ 0.63
TRAF3-204ENST00000539721 FAM196BA6NMK8 535 aa18.95■□□□□ 0.62
TRAF3-204ENST00000539721 SLURP2P0DP57 97 aa18.95■□□□□ 0.62
TRAF3-204ENST00000539721 ST3GAL1Q11201 340 aa18.95■□□□□ 0.62
TRAF3-204ENST00000539721 IFIT1BQ5T764 474 aaKnown RBP18.95■□□□□ 0.62
TRAF3-204ENST00000539721 ANGEL2Q5VTE6 544 aaKnown RBP18.95■□□□□ 0.62
TRAF3-204ENST00000539721 METTL16Q86W50 562 aaKnown RBP18.95■□□□□ 0.62
TRAF3-204ENST00000539721 APOBEC3FQ8IUX4 373 aaKnown RBP18.95■□□□□ 0.62
TRAF3-204ENST00000539721 NEDD1Q8NHV4 660 aa18.95■□□□□ 0.62
TRAF3-204ENST00000539721 GTF3C6Q969F1 213 aa18.95■□□□□ 0.62
TRAF3-204ENST00000539721 TCP11L1Q9NUJ3 509 aa18.95■□□□□ 0.62
TRAF3-204ENST00000539721 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.95■□□□□ 0.62
TRAF3-204ENST00000539721 HIRAP54198 1017 aaPredicted RBP18.94■□□□□ 0.62
TRAF3-204ENST00000539721 APOA5Q6Q788 366 aa18.94■□□□□ 0.62
TRAF3-204ENST00000539721 SYNE3Q6ZMZ3 975 aa18.94■□□□□ 0.62
TRAF3-204ENST00000539721 HERC5Q9UII4 1024 aaKnown RBP18.94■□□□□ 0.62
TRAF3-204ENST00000539721 SLC12A7Q9Y666 1083 aa18.94■□□□□ 0.62
TRAF3-204ENST00000539721 PLIN4Q96Q06 1357 aa18.94■□□□□ 0.62
TRAF3-204ENST00000539721 DCAF8L1A6NGE4 600 aa18.93■□□□□ 0.62
TRAF3-204ENST00000539721 AKR1B1P15121 316 aa18.93■□□□□ 0.62
TRAF3-204ENST00000539721 CCT2P78371 535 aaKnown RBP18.93■□□□□ 0.62
TRAF3-204ENST00000539721 SCRN1Q12765 414 aa18.93■□□□□ 0.62
TRAF3-204ENST00000539721 RAB11FIP4Q86YS3 637 aa18.93■□□□□ 0.62
TRAF3-204ENST00000539721 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.93■□□□□ 0.62
TRAF3-204ENST00000539721 IL17RBQ9NRM6 502 aa18.93■□□□□ 0.62
TRAF3-204ENST00000539721 GGA3Q9NZ52 723 aa18.93■□□□□ 0.62
TRAF3-204ENST00000539721 SCN4AP35499 1836 aa18.93■□□□□ 0.62
TRAF3-204ENST00000539721 ZBTB43O43298 467 aa18.93■□□□□ 0.62
TRAF3-204ENST00000539721 TATDN1Q6P1N9 297 aa18.93■□□□□ 0.62
TRAF3-204ENST00000539721 CDAN1Q8IWY9 1227 aa18.93■□□□□ 0.62
TRAF3-204ENST00000539721 CCDC17Q96LX7 622 aa18.93■□□□□ 0.62
TRAF3-204ENST00000539721 PGAP2Q9UHJ9 254 aa18.93■□□□□ 0.62
TRAF3-204ENST00000539721 GREB1LQ9C091 1923 aaPredicted RBP18.93■□□□□ 0.62
TRAF3-204ENST00000539721 MPHOSPH10O00566 681 aaKnown RBP18.92■□□□□ 0.62
TRAF3-204ENST00000539721 CERKLQ49MI3 558 aaPredicted RBP18.92■□□□□ 0.62
TRAF3-204ENST00000539721 MICU3Q86XE3 530 aa18.92■□□□□ 0.62
TRAF3-204ENST00000539721 DGKHQ86XP1 1220 aa18.92■□□□□ 0.62
TRAF3-204ENST00000539721 ZNF654Q8IZM8 581 aa18.92■□□□□ 0.62
TRAF3-204ENST00000539721 DEFB129Q9H1M3 183 aa18.92■□□□□ 0.62
TRAF3-204ENST00000539721 HPS5Q9UPZ3 1129 aa18.92■□□□□ 0.62
TRAF3-204ENST00000539721 METAP2P50579 478 aaKnown RBP eCLIP18.91■□□□□ 0.62
TRAF3-204ENST00000539721 CHMP4CQ96CF2 233 aa18.91■□□□□ 0.62
TRAF3-204ENST00000539721 MYL10Q9BUA6 226 aa18.91■□□□□ 0.62
TRAF3-204ENST00000539721 NCOA5Q9HCD5 579 aaKnown RBP18.91■□□□□ 0.62
TRAF3-204ENST00000539721 CWC22Q9HCG8 908 aaKnown RBP18.91■□□□□ 0.62
TRAF3-204ENST00000539721 SMC3Q9UQE7 1217 aa18.91■□□□□ 0.62
TRAF3-204ENST00000539721 WDR90Q96KV7 1748 aa18.91■□□□□ 0.62
TRAF3-204ENST00000539721 GOLGA8AA7E2F4 631 aa18.91■□□□□ 0.62
TRAF3-204ENST00000539721 RXRAP19793 462 aa18.91■□□□□ 0.62
TRAF3-204ENST00000539721 RCSD1Q6JBY9 416 aa18.91■□□□□ 0.62
TRAF3-204ENST00000539721 CATIPQ7Z7H3 387 aa18.91■□□□□ 0.62
TRAF3-204ENST00000539721 TEPSINQ96N21 525 aa18.91■□□□□ 0.62
TRAF3-204ENST00000539721 KAT14Q9H8E8 782 aa18.91■□□□□ 0.62
TRAF3-204ENST00000539721 STX8Q9UNK0 236 aa18.91■□□□□ 0.62
TRAF3-204ENST00000539721 POLR2AP24928 1970 aaKnown RBP18.91■□□□□ 0.62
TRAF3-204ENST00000539721 TBC1D12O60347 775 aa18.9■□□□□ 0.62
TRAF3-204ENST00000539721 EPHX2P34913 555 aa18.9■□□□□ 0.62
TRAF3-204ENST00000539721 USP50Q70EL3 339 aaPredicted RBP18.9■□□□□ 0.62
TRAF3-204ENST00000539721 CCDC144CPQ8IYA2 1237 aa18.9■□□□□ 0.62
TRAF3-204ENST00000539721 ANKS1AQ92625 1134 aa18.9■□□□□ 0.62
TRAF3-204ENST00000539721 CEP95Q96GE4 821 aa18.9■□□□□ 0.62
TRAF3-204ENST00000539721 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.9■□□□□ 0.62
TRAF3-204ENST00000539721 PITPNM2Q9BZ72 1349 aa18.9■□□□□ 0.62
TRAF3-204ENST00000539721 IQCA1LA6NCM1 817 aa18.89■□□□□ 0.61
TRAF3-204ENST00000539721 MIGA2Q7L4E1 593 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 869.9 ms