RNA–Protein interactions for RNA: ENST00000539699.5

DDX11-215, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-215ENST00000539699 NOL10Q9BSC4 688 aaKnown RBP20.21■□□□□ 0.83
DDX11-215ENST00000539699 RBPJLQ9UBG7 517 aa20.21■□□□□ 0.83
DDX11-215ENST00000539699 USP17L10C9JJH3 530 aa20.2■□□□□ 0.82
DDX11-215ENST00000539699 MAPK4P31152 587 aa20.2■□□□□ 0.82
DDX11-215ENST00000539699 CACNB2Q08289 660 aaPredicted RBP20.2■□□□□ 0.82
DDX11-215ENST00000539699 Q3C1V9 767 aa20.2■□□□□ 0.82
DDX11-215ENST00000539699 METTL16Q86W50 562 aaKnown RBP20.2■□□□□ 0.82
DDX11-215ENST00000539699 TRMT44Q8IYL2 757 aaKnown RBP20.2■□□□□ 0.82
DDX11-215ENST00000539699 USP6NLQ92738 828 aa20.2■□□□□ 0.82
DDX11-215ENST00000539699 UBE2OQ9C0C9 1292 aaKnown RBP20.2■□□□□ 0.82
DDX11-215ENST00000539699 DNAJC18Q9H819 358 aa20.2■□□□□ 0.82
DDX11-215ENST00000539699 MTMR10Q9NXD2 777 aa20.2■□□□□ 0.82
DDX11-215ENST00000539699 AATFQ9NY61 560 aaKnown RBP eCLIP20.2■□□□□ 0.82
DDX11-215ENST00000539699 STXBP5LQ9Y2K9 1186 aa20.2■□□□□ 0.82
DDX11-215ENST00000539699 SIPA1L1O43166 1804 aa20.19■□□□□ 0.82
DDX11-215ENST00000539699 BAG3O95817 575 aa20.19■□□□□ 0.82
DDX11-215ENST00000539699 UQCRFS1P1P0C7P4 283 aa20.19■□□□□ 0.82
DDX11-215ENST00000539699 COL6A1P12109 1028 aa20.19■□□□□ 0.82
DDX11-215ENST00000539699 ZKSCAN1P17029 563 aaPredicted RBP20.19■□□□□ 0.82
DDX11-215ENST00000539699 PDE3AQ14432 1141 aa20.19■□□□□ 0.82
DDX11-215ENST00000539699 FOXP4Q8IVH2 680 aaPredicted RBP20.19■□□□□ 0.82
DDX11-215ENST00000539699 TGFBRAP1Q8WUH2 860 aa20.19■□□□□ 0.82
DDX11-215ENST00000539699 ARHGAP45Q92619 1136 aa20.19■□□□□ 0.82
DDX11-215ENST00000539699 DNAH12Q6ZR08 3092 aa20.18■□□□□ 0.82
DDX11-215ENST00000539699 PLCG2P16885 1265 aa20.18■□□□□ 0.82
DDX11-215ENST00000539699 PPP4CP60510 307 aa20.18■□□□□ 0.82
DDX11-215ENST00000539699 ERVK-9P63128 1117 aa20.18■□□□□ 0.82
DDX11-215ENST00000539699 ERVK-24P63145 666 aa20.18■□□□□ 0.82
DDX11-215ENST00000539699 SHROOM1Q2M3G4 852 aaPredicted RBP20.18■□□□□ 0.82
DDX11-215ENST00000539699 LHX8Q68G74 356 aa20.18■□□□□ 0.82
DDX11-215ENST00000539699 NAA16Q6N069 864 aaPredicted RBP20.18■□□□□ 0.82
DDX11-215ENST00000539699 GINM1Q9NU53 330 aa20.18■□□□□ 0.82
DDX11-215ENST00000539699 GDF11O95390 407 aa20.17■□□□□ 0.82
DDX11-215ENST00000539699 RARSP54136 660 aaKnown RBP20.17■□□□□ 0.82
DDX11-215ENST00000539699 G3BP1Q13283 466 aaKnown RBP eCLIP20.17■□□□□ 0.82
DDX11-215ENST00000539699 MORN1Q5T089 497 aa20.17■□□□□ 0.82
DDX11-215ENST00000539699 GPR142Q7Z601 462 aa20.17■□□□□ 0.82
DDX11-215ENST00000539699 MAPKAPK5Q8IW41 473 aa20.17■□□□□ 0.82
DDX11-215ENST00000539699 CRACR2BQ8N4Y2 399 aaPredicted RBP20.17■□□□□ 0.82
DDX11-215ENST00000539699 GTF3C2Q8WUA4 911 aaPredicted RBP20.17■□□□□ 0.82
DDX11-215ENST00000539699 PORCNQ9H237 461 aa20.17■□□□□ 0.82
DDX11-215ENST00000539699 FLT1P17948 1338 aa20.17■□□□□ 0.82
DDX11-215ENST00000539699 UNC80Q8N2C7 3258 aa20.17■□□□□ 0.82
DDX11-215ENST00000539699 CCND3P30281 292 aaPredicted RBP20.16■□□□□ 0.82
DDX11-215ENST00000539699 RGS2P41220 211 aa20.16■□□□□ 0.82
DDX11-215ENST00000539699 CCL14Q16627 93 aa20.16■□□□□ 0.82
DDX11-215ENST00000539699 LRRC26Q2I0M4 334 aa20.16■□□□□ 0.82
DDX11-215ENST00000539699 POTEEQ6S8J3 1075 aa20.16■□□□□ 0.82
DDX11-215ENST00000539699 CCAR1Q8IX12 1150 aaKnown RBP20.16■□□□□ 0.82
DDX11-215ENST00000539699 TRIM34Q9BYJ4 488 aa20.16■□□□□ 0.82
DDX11-215ENST00000539699 SNRKQ9NRH2 765 aa20.16■□□□□ 0.82
DDX11-215ENST00000539699 EMILIN3Q9NT22 766 aa20.16■□□□□ 0.82
DDX11-215ENST00000539699 PALD1Q9ULE6 856 aa20.16■□□□□ 0.82
DDX11-215ENST00000539699 LAMA2P24043 3122 aaKnown RBP20.16■□□□□ 0.82
DDX11-215ENST00000539699 PNMA6EA0A0J9YXQ4 647 aa20.15■□□□□ 0.82
DDX11-215ENST00000539699 PLEKHH3Q7Z736 793 aa20.15■□□□□ 0.82
DDX11-215ENST00000539699 ADGRA1Q86SQ6 560 aa20.15■□□□□ 0.82
DDX11-215ENST00000539699 PAGR1Q9BTK6 254 aa20.15■□□□□ 0.82
DDX11-215ENST00000539699 ZBTB21Q9ULJ3 1066 aa20.15■□□□□ 0.82
DDX11-215ENST00000539699 GNAI2P04899 355 aa20.14■□□□□ 0.81
DDX11-215ENST00000539699 APBA2Q99767 749 aa20.14■□□□□ 0.81
DDX11-215ENST00000539699 CYP2E1P05181 493 aaPredicted RBP20.13■□□□□ 0.81
DDX11-215ENST00000539699 MDM2Q00987 491 aaPredicted RBP20.13■□□□□ 0.81
DDX11-215ENST00000539699 TTC39AQ5SRH9 613 aa20.13■□□□□ 0.81
DDX11-215ENST00000539699 USP17L2Q6R6M4 530 aa20.13■□□□□ 0.81
DDX11-215ENST00000539699 CDK5RAP2Q96SN8 1893 aa20.12■□□□□ 0.81
DDX11-215ENST00000539699 FOCADQ5VW36 1801 aa20.12■□□□□ 0.81
DDX11-215ENST00000539699 HLA-DOAP06340 250 aa20.12■□□□□ 0.81
DDX11-215ENST00000539699 MAP2K5Q13163 448 aa20.12■□□□□ 0.81
DDX11-215ENST00000539699 CCDC158Q5M9N0 1113 aa20.12■□□□□ 0.81
DDX11-215ENST00000539699 EDC3Q96F86 508 aaKnown RBP20.12■□□□□ 0.81
DDX11-215ENST00000539699 GPR108Q9NPR9 543 aa20.12■□□□□ 0.81
DDX11-215ENST00000539699 SAP30BPQ9UHR5 308 aaKnown RBP20.12■□□□□ 0.81
DDX11-215ENST00000539699 RABGAP1Q9Y3P9 1069 aa20.12■□□□□ 0.81
DDX11-215ENST00000539699 IGSF3O75054 1194 aa20.11■□□□□ 0.81
DDX11-215ENST00000539699 ATF7IPQ6VMQ6 1270 aa20.11■□□□□ 0.81
DDX11-215ENST00000539699 C12orf42Q96LP6 360 aa20.11■□□□□ 0.81
DDX11-215ENST00000539699 CWC22Q9HCG8 908 aaKnown RBP20.11■□□□□ 0.81
DDX11-215ENST00000539699 MAST2Q6P0Q8 1798 aa20.11■□□□□ 0.81
DDX11-215ENST00000539699 POTEB2H3BUK9 544 aa20.1■□□□□ 0.81
DDX11-215ENST00000539699 CNMDO75829 334 aa20.1■□□□□ 0.81
DDX11-215ENST00000539699 GH2P01242 217 aa20.1■□□□□ 0.81
DDX11-215ENST00000539699 CCNA1P78396 465 aa20.1■□□□□ 0.81
DDX11-215ENST00000539699 TNNI3KQ59H18 835 aa20.1■□□□□ 0.81
DDX11-215ENST00000539699 DBNDD2Q9BQY9 259 aa20.1■□□□□ 0.81
DDX11-215ENST00000539699 FPGT-TNNI3KV9GXZ4 949 aa20.1■□□□□ 0.81
DDX11-215ENST00000539699 USP17L15C9J2P7 530 aa20.09■□□□□ 0.81
DDX11-215ENST00000539699 USP17L13C9JLJ4 530 aa20.09■□□□□ 0.81
DDX11-215ENST00000539699 USP17L11C9JVI0 530 aa20.09■□□□□ 0.81
DDX11-215ENST00000539699 USP17L18D6R9N7 530 aa20.09■□□□□ 0.81
DDX11-215ENST00000539699 USP17L22D6RA61 530 aa20.09■□□□□ 0.81
DDX11-215ENST00000539699 USP17L17D6RBQ6 530 aa20.09■□□□□ 0.81
DDX11-215ENST00000539699 USP17L19D6RCP7 530 aa20.09■□□□□ 0.81
DDX11-215ENST00000539699 USP17L20D6RJB6 530 aa20.09■□□□□ 0.81
DDX11-215ENST00000539699 IPO8O15397 1037 aaKnown RBP20.09■□□□□ 0.81
DDX11-215ENST00000539699 GLRX3O76003 335 aaKnown RBP20.09■□□□□ 0.81
DDX11-215ENST00000539699 TRIM27P14373 513 aa20.09■□□□□ 0.81
DDX11-215ENST00000539699 DYNLL1P63167 89 aaKnown RBP20.09■□□□□ 0.81
DDX11-215ENST00000539699 USP17L24Q0WX57 530 aa20.09■□□□□ 0.81
DDX11-215ENST00000539699 MFSD14CQ5VZR4 134 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms