RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 ROBO3Q96MS0 1386 aa15.16■□□□□ 0.02
TSPAN9-207ENST00000539631 SPDYE5A6NIY4 337 aa15.16■□□□□ 0.02
TSPAN9-207ENST00000539631 CDC45O75419 566 aa15.16■□□□□ 0.02
TSPAN9-207ENST00000539631 CDK8P49336 464 aa15.16■□□□□ 0.02
TSPAN9-207ENST00000539631 PPARAQ07869 468 aa15.16■□□□□ 0.02
TSPAN9-207ENST00000539631 CCDC84Q86UT8 332 aaPredicted RBP15.16■□□□□ 0.02
TSPAN9-207ENST00000539631 ERO1BQ86YB8 467 aa15.16■□□□□ 0.02
TSPAN9-207ENST00000539631 OTUD5Q96G74 571 aa15.16■□□□□ 0.02
TSPAN9-207ENST00000539631 ESYT1Q9BSJ8 1104 aa15.16■□□□□ 0.02
TSPAN9-207ENST00000539631 SWAP70Q9UH65 585 aa15.16■□□□□ 0.02
TSPAN9-207ENST00000539631 PTPRAP18433 802 aa15.15■□□□□ 0.02
TSPAN9-207ENST00000539631 KIF23Q02241 960 aaPredicted RBP15.15■□□□□ 0.02
TSPAN9-207ENST00000539631 PTH1RQ03431 593 aa15.15■□□□□ 0.02
TSPAN9-207ENST00000539631 CTDSPL2Q05D32 466 aa15.15■□□□□ 0.02
TSPAN9-207ENST00000539631 NOGQ13253 232 aa15.15■□□□□ 0.02
TSPAN9-207ENST00000539631 CERKLQ49MI3 558 aaPredicted RBP15.15■□□□□ 0.02
TSPAN9-207ENST00000539631 DSCC1Q9BVC3 393 aa15.15■□□□□ 0.02
TSPAN9-207ENST00000539631 PICK1Q9NRD5 415 aa15.15■□□□□ 0.02
TSPAN9-207ENST00000539631 PTPRFP10586 1907 aa15.15■□□□□ 0.02
TSPAN9-207ENST00000539631 ZMYM6O95789 1325 aa15.15■□□□□ 0.02
TSPAN9-207ENST00000539631 ZBTB48P10074 688 aaPredicted RBP15.14■□□□□ 0.01
TSPAN9-207ENST00000539631 PPATQ06203 517 aa15.14■□□□□ 0.01
TSPAN9-207ENST00000539631 ABCB5Q2M3G0 1257 aa15.14■□□□□ 0.01
TSPAN9-207ENST00000539631 JMYQ8N9B5 988 aa15.14■□□□□ 0.01
TSPAN9-207ENST00000539631 TAOK2Q9UL54 1235 aa15.14■□□□□ 0.01
TSPAN9-207ENST00000539631 ZBTB21Q9ULJ3 1066 aa15.14■□□□□ 0.01
TSPAN9-207ENST00000539631 GREB1LQ9C091 1923 aaPredicted RBP15.13■□□□□ 0.01
TSPAN9-207ENST00000539631 GH2P01242 217 aa15.13■□□□□ 0.01
TSPAN9-207ENST00000539631 ASNSP08243 561 aa15.13■□□□□ 0.01
TSPAN9-207ENST00000539631 AKR1B1P15121 316 aa15.13■□□□□ 0.01
TSPAN9-207ENST00000539631 MAP2K2P36507 400 aa15.13■□□□□ 0.01
TSPAN9-207ENST00000539631 HAND2P61296 217 aa15.13■□□□□ 0.01
TSPAN9-207ENST00000539631 PPIL2Q13356 520 aa15.13■□□□□ 0.01
TSPAN9-207ENST00000539631 INCENPQ9NQS7 918 aa15.13■□□□□ 0.01
TSPAN9-207ENST00000539631 ANAPC4Q9UJX5 808 aa15.13■□□□□ 0.01
TSPAN9-207ENST00000539631 TACC3Q9Y6A5 838 aa15.13■□□□□ 0.01
TSPAN9-207ENST00000539631 ZHX2Q9Y6X8 837 aa15.13■□□□□ 0.01
TSPAN9-207ENST00000539631 USP17L5A8MUK1 530 aa15.12■□□□□ 0.01
TSPAN9-207ENST00000539631 MPHOSPH10O00566 681 aaKnown RBP15.12■□□□□ 0.01
TSPAN9-207ENST00000539631 IRF6O14896 467 aa15.12■□□□□ 0.01
TSPAN9-207ENST00000539631 PRDM1O75626 825 aa15.12■□□□□ 0.01
TSPAN9-207ENST00000539631 SLC3A2P08195 630 aaKnown RBP15.12■□□□□ 0.01
TSPAN9-207ENST00000539631 RASA1P20936 1047 aa15.12■□□□□ 0.01
TSPAN9-207ENST00000539631 GUCY1A2P33402 732 aa15.12■□□□□ 0.01
TSPAN9-207ENST00000539631 CASC1Q6TDU7 716 aa15.12■□□□□ 0.01
TSPAN9-207ENST00000539631 MKNK2Q9HBH9 465 aa15.12■□□□□ 0.01
TSPAN9-207ENST00000539631 CABP5Q9NP86 173 aa15.12■□□□□ 0.01
TSPAN9-207ENST00000539631 GINM1Q9NU53 330 aa15.12■□□□□ 0.01
TSPAN9-207ENST00000539631 AFG3L2Q9Y4W6 797 aa15.12■□□□□ 0.01
TSPAN9-207ENST00000539631 ZNF213O14771 459 aa15.11■□□□□ 0.01
TSPAN9-207ENST00000539631 PDE4BQ07343 736 aa15.11■□□□□ 0.01
TSPAN9-207ENST00000539631 MS4A4AQ96JQ5 239 aa15.11■□□□□ 0.01
TSPAN9-207ENST00000539631 CCDC17Q96LX7 622 aa15.11■□□□□ 0.01
TSPAN9-207ENST00000539631 LSG1Q9H089 658 aaKnown RBP15.11■□□□□ 0.01
TSPAN9-207ENST00000539631 NBPF3Q9H094 633 aa15.11■□□□□ 0.01
TSPAN9-207ENST00000539631 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.11■□□□□ 0.01
TSPAN9-207ENST00000539631 MANSC4A6NHS7 340 aaPredicted RBP15.1■□□□□ 0.01
TSPAN9-207ENST00000539631 GTF2A2P52657 109 aa15.1■□□□□ 0.01
TSPAN9-207ENST00000539631 SPP2Q13103 211 aa15.1■□□□□ 0.01
TSPAN9-207ENST00000539631 SEPT2Q15019 361 aa15.1■□□□□ 0.01
TSPAN9-207ENST00000539631 RAB3GAP1Q15042 981 aa15.1■□□□□ 0.01
TSPAN9-207ENST00000539631 KIAA1211Q6ZU35 1233 aa15.1■□□□□ 0.01
TSPAN9-207ENST00000539631 TBC1D10CQ8IV04 446 aa15.1■□□□□ 0.01
TSPAN9-207ENST00000539631 ZNF444Q8N0Y2 327 aaPredicted RBP15.1■□□□□ 0.01
TSPAN9-207ENST00000539631 MAP4K1Q92918 833 aa15.1■□□□□ 0.01
TSPAN9-207ENST00000539631 AS3MTQ9HBK9 375 aa15.1■□□□□ 0.01
TSPAN9-207ENST00000539631 ZNF287Q9HBT7 754 aa15.1■□□□□ 0.01
TSPAN9-207ENST00000539631 CTNNA3Q9UI47 895 aa15.1■□□□□ 0.01
TSPAN9-207ENST00000539631 KCNH4Q9UQ05 1017 aa15.1■□□□□ 0.01
TSPAN9-207ENST00000539631 MYH4Q9Y623 1939 aa15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 LOC285556D6RIA3 1793 aa15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 CCL15-CCL14A0A0B4J2E2 113 aa15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 TESPA1A2RU30 521 aaPredicted RBP15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 TRIM75PA6NK02 468 aa15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 CXCL11O14625 94 aa15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 TM4SF4P48230 202 aa15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 SREBF2Q12772 1141 aa15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 SNAPC2Q13487 334 aa15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 CCL15Q16663 113 aa15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 IMMTQ16891 758 aaKnown RBP15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 TMEM179Q6ZVK1 233 aa15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 ZNF280CQ8ND82 737 aa15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 BRI3BPQ8WY22 251 aa15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 WDR18Q9BV38 432 aa15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 TBC1D2Q9BYX2 928 aa15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 ANO2Q9NQ90 1003 aa15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 RBM8AQ9Y5S9 174 aaKnown RBP15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 U3KPZ7 1027 aaPredicted RBP15.09■□□□□ 0.01
TSPAN9-207ENST00000539631 FGRP09769 529 aa15.08■□□□□ 0
TSPAN9-207ENST00000539631 FAM47AQ5JRC9 791 aa15.08■□□□□ 0
TSPAN9-207ENST00000539631 RRP12Q5JTH9 1297 aaKnown RBP15.08■□□□□ 0
TSPAN9-207ENST00000539631 AKNAD1Q5T1N1 836 aa15.08■□□□□ 0
TSPAN9-207ENST00000539631 CLEC10AQ8IUN9 316 aa15.08■□□□□ 0
TSPAN9-207ENST00000539631 REM2Q8IYK8 340 aaPredicted RBP15.08■□□□□ 0
TSPAN9-207ENST00000539631 STAG1Q8WVM7 1258 aa15.08■□□□□ 0
TSPAN9-207ENST00000539631 PTPN18Q99952 460 aa15.08■□□□□ 0
TSPAN9-207ENST00000539631 A0A0G2JLL6 359 aaPredicted RBP15.07■□□□□ 0
TSPAN9-207ENST00000539631 IGF2BP3O00425 579 aaKnown RBP eCLIP15.07■□□□□ 0
TSPAN9-207ENST00000539631 ORC4O43929 436 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms