RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 C9orf172C9J069 976 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 H3BRJ5 948 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 SOX1O00570 391 aaPredicted RBP1.55□□□□□ -2.16
HIF1A-204ENST00000539097 DEAF1O75398 565 aaPredicted RBP1.55□□□□□ -2.16
HIF1A-204ENST00000539097 TYRP1P17643 537 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 ADH6P28332 368 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 SIK1P57059 783 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 TBC1D8BQ0IIM8 1120 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 GK5Q6ZS86 529 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 ANKS3Q6ZW76 656 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 NCAPG2Q86XI2 1143 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 KIAA0825Q8IV33 1275 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 SLC16A10Q8TF71 515 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 DHRS1Q96LJ7 313 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 YIPF2Q9BWQ6 316 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 TMEM39AQ9NV64 488 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 DNAJB12Q9NXW2 375 aaKnown RBP1.55□□□□□ -2.16
HIF1A-204ENST00000539097 NOP53Q9NZM5 478 aaKnown RBP1.55□□□□□ -2.16
HIF1A-204ENST00000539097 KLHL42Q9P2K6 505 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 MAPRE3Q9UPY8 281 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 U3KQE9 123 aa1.55□□□□□ -2.16
HIF1A-204ENST00000539097 CDC14CA4D256 554 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 PDE2AO00408 941 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 WNT9AO14904 365 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 SMAD7O15105 426 aaKnown RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 EIF3JO75822 258 aaKnown RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 FGFR1P11362 822 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 FGFR3P22607 806 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 CDC27P30260 824 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 PDE4BQ07343 736 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 FXNQ16595 210 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 E4F1Q66K89 784 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 ANKRD34AQ69YU3 496 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 CCSAPQ6IQ19 270 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 FAM117BQ6P1L5 589 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 C6orf15Q6UXA7 325 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 KIAA0907Q7Z7F0 614 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 SKAP1Q86WV1 359 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 WHAMMQ8TF30 809 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 JARID2Q92833 1246 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 NKD1Q969G9 470 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 DNAJC7Q99615 494 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 FBRSQ9HAH7 460 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 MINPP1Q9UNW1 487 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 PCDHGC5Q9Y5F6 944 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 ESYT3A0FGR9 886 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 FAM177BA6PVY3 158 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 NEURL1BA8MQ27 555 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 ALG1L2C9J202 215 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 K7ELQ4 463 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 PLD2O14939 933 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 ZNF862O60290 1169 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 RAB11FIP3O75154 756 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 STK10O94804 968 aaKnown RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 AMPD3Q01432 767 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 NRG1Q02297 640 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 RAB33AQ14088 237 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 FOXD4L6Q3SYB3 417 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 TMEM67Q5HYA8 995 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 MAP1SQ66K74 1059 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 GDF6Q6KF10 455 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 FOXD4L3Q6VB84 417 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 REC114Q7Z4M0 266 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 HOMER1Q86YM7 354 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 JAMLQ86YT9 394 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 VWA5B2Q8N398 1253 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 MISP3Q96FF7 219 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 ATXN3LQ9H3M9 355 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 PCOLCE2Q9UKZ9 415 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 CSADQ9Y600 493 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 GFRA2O00451 464 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 PPFIA3O75145 1194 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 ESRRAP11474 423 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 CPEP16870 476 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 CYP4F3Q08477 520 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 DHCR24Q15392 516 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 SF1Q15637 639 aaKnown RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 EXOSC6Q5RKV6 272 aaKnown RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 CEP135Q66GS9 1140 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 DTHD1Q6ZMT9 781 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 LHFPL2Q6ZUX7 228 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 FAM35AQ86V20 835 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 PPFIBP1Q86W92 1011 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 SHISA5Q8N114 240 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 LRRC47Q8N1G4 583 aaKnown RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 ZSWIM2Q8NEG5 633 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 KIF2CQ99661 725 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 MENTQ9BUN1 341 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 SMG9Q9H0W8 520 aaKnown RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 CLEC4MQ9H2X3 399 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 PFDN2Q9UHV9 154 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 ZNF281Q9Y2X9 895 aa1.54□□□□□ -2.16
HIF1A-204ENST00000539097 COL17A1Q9UMD9 1497 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-204ENST00000539097 PMS2P1A4D2B8 440 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 C9IYK1 514 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 SHOXO15266 292 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 DYNC1LI2O43237 492 aaPredicted RBP1.53□□□□□ -2.16
HIF1A-204ENST00000539097 ADCY3O60266 1144 aa1.53□□□□□ -2.16
HIF1A-204ENST00000539097 GJB6O95452 261 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms