RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 C2CD5Q86YS7 1000 aa17.17■□□□□ 0.34
ATL3-203ENST00000538786 CCAR1Q8IX12 1150 aaKnown RBP17.17■□□□□ 0.34
ATL3-203ENST00000538786 ZNF622Q969S3 477 aaKnown RBP eCLIP17.17■□□□□ 0.344e-6■□□□□ 9.6
ATL3-203ENST00000538786 EYA3Q99504 573 aa17.17■□□□□ 0.34
ATL3-203ENST00000538786 CLIC4Q9Y696 253 aa17.17■□□□□ 0.34
ATL3-203ENST00000538786 H0YIN7 160 aa17.16■□□□□ 0.34
ATL3-203ENST00000538786 NMT2O60551 498 aa17.16■□□□□ 0.34
ATL3-203ENST00000538786 STK38Q15208 465 aa17.16■□□□□ 0.34
ATL3-203ENST00000538786 ANO1Q5XXA6 986 aa17.16■□□□□ 0.34
ATL3-203ENST00000538786 RBM43Q6ZSC3 357 aaKnown RBP17.16■□□□□ 0.34
ATL3-203ENST00000538786 MAPKAPK5Q8IW41 473 aa17.16■□□□□ 0.34
ATL3-203ENST00000538786 TEX11Q8IYF3 940 aa17.16■□□□□ 0.34
ATL3-203ENST00000538786 CMTR1Q8N1G2 835 aaKnown RBP17.16■□□□□ 0.34
ATL3-203ENST00000538786 CCDC82Q8N4S0 544 aa17.16■□□□□ 0.34
ATL3-203ENST00000538786 DLEC1Q9Y238 1755 aa17.16■□□□□ 0.34
ATL3-203ENST00000538786 A0A1W2PQ27 194 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 A0A1W2PQ64 194 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 A0A1W2PQD8 194 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 MMP1P03956 469 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 RHBDL3P58872 404 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 EN1Q05925 392 aaPredicted RBP17.15■□□□□ 0.34
ATL3-203ENST00000538786 FUT2Q10981 343 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 SAFBQ15424 915 aaKnown RBP eCLIP17.15■□□□□ 0.34
ATL3-203ENST00000538786 CAMK4Q16566 473 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 SLC4A8Q2Y0W8 1093 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 ADALQ6DHV7 355 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 DYNLL2Q96FJ2 89 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.15■□□□□ 0.34
ATL3-203ENST00000538786 PCDHA7Q9UN72 937 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 SPTLC2O15270 562 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 CCDC192P0DO97 292 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 TFAP4Q01664 338 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 SF3A1Q15459 793 aaKnown RBP17.15■□□□□ 0.34
ATL3-203ENST00000538786 UVSSAQ2YD98 709 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 CCDC178Q5BJE1 867 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 RCSD1Q6JBY9 416 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 CCDC73Q6ZRK6 1079 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 DGKHQ86XP1 1220 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 MKNK2Q9HBH9 465 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 ZNF287Q9HBT7 754 aa17.15■□□□□ 0.34
ATL3-203ENST00000538786 PRPF3O43395 683 aaKnown RBP17.14■□□□□ 0.33
ATL3-203ENST00000538786 PLCD1P51178 756 aa17.14■□□□□ 0.33
ATL3-203ENST00000538786 AKAP17AQ02040 695 aaKnown RBP17.14■□□□□ 0.33
ATL3-203ENST00000538786 TMTC3Q6ZXV5 915 aa17.14■□□□□ 0.33
ATL3-203ENST00000538786 ANKS1AQ92625 1134 aa17.14■□□□□ 0.33
ATL3-203ENST00000538786 GOLPH3LQ9H4A5 285 aa17.14■□□□□ 0.33
ATL3-203ENST00000538786 SAP30BPQ9UHR5 308 aaKnown RBP17.14■□□□□ 0.33
ATL3-203ENST00000538786 DAGLAQ9Y4D2 1042 aa17.14■□□□□ 0.33
ATL3-203ENST00000538786 MYH2Q9UKX2 1941 aa17.14■□□□□ 0.33
ATL3-203ENST00000538786 ECM29Q5VYK3 1845 aa17.14■□□□□ 0.33
ATL3-203ENST00000538786 FLT1P17948 1338 aa17.14■□□□□ 0.33
ATL3-203ENST00000538786 FAM160A1Q05DH4 1040 aa17.13■□□□□ 0.33
ATL3-203ENST00000538786 SLC39A14Q15043 492 aa17.13■□□□□ 0.33
ATL3-203ENST00000538786 DOK7Q18PE1 504 aa17.13■□□□□ 0.33
ATL3-203ENST00000538786 NOSTRINQ8IVI9 506 aa17.13■□□□□ 0.33
ATL3-203ENST00000538786 CTCFLQ8NI51 663 aaPredicted RBP17.13■□□□□ 0.33
ATL3-203ENST00000538786 FOXP1Q9H334 677 aaPredicted RBP17.13■□□□□ 0.33
ATL3-203ENST00000538786 TCP11L1Q9NUJ3 509 aa17.13■□□□□ 0.33
ATL3-203ENST00000538786 NAV1Q8NEY1 1877 aa17.13■□□□□ 0.33
ATL3-203ENST00000538786 G3V3G9 751 aa17.13■□□□□ 0.33
ATL3-203ENST00000538786 DCAF8Q5TAQ9 597 aa17.13■□□□□ 0.33
ATL3-203ENST00000538786 DIS3L2Q8IYB7 885 aaKnown RBP17.13■□□□□ 0.33
ATL3-203ENST00000538786 ZNF444Q8N0Y2 327 aaPredicted RBP17.13■□□□□ 0.33
ATL3-203ENST00000538786 CERS5Q8N5B7 392 aa17.13■□□□□ 0.33
ATL3-203ENST00000538786 FSIP1Q8NA03 581 aa17.13■□□□□ 0.33
ATL3-203ENST00000538786 ENGASEQ8NFI3 743 aa17.13■□□□□ 0.33
ATL3-203ENST00000538786 MRPS27Q92552 414 aaKnown RBP17.13■□□□□ 0.33
ATL3-203ENST00000538786 FBXW7Q969H0 707 aa17.13■□□□□ 0.33
ATL3-203ENST00000538786 PDLIM2Q96JY6 352 aa17.13■□□□□ 0.33
ATL3-203ENST00000538786 IL17RBQ9NRM6 502 aa17.13■□□□□ 0.33
ATL3-203ENST00000538786 TAOK2Q9UL54 1235 aa17.13■□□□□ 0.33
ATL3-203ENST00000538786 CTAGE5O15320 804 aa17.12■□□□□ 0.33
ATL3-203ENST00000538786 PLEKHA8P1O95397 391 aa17.12■□□□□ 0.33
ATL3-203ENST00000538786 XBP1P17861 261 aa17.12■□□□□ 0.33
ATL3-203ENST00000538786 SNW1Q13573 536 aaKnown RBP17.12■□□□□ 0.33
ATL3-203ENST00000538786 C16orf86Q6ZW13 317 aa17.12■□□□□ 0.33
ATL3-203ENST00000538786 PODNQ7Z5L7 613 aa17.12■□□□□ 0.33
ATL3-203ENST00000538786 CNKSR1Q969H4 720 aa17.12■□□□□ 0.33
ATL3-203ENST00000538786 KAT14Q9H8E8 782 aa17.12■□□□□ 0.33
ATL3-203ENST00000538786 KCNJ14Q9UNX9 436 aa17.12■□□□□ 0.33
ATL3-203ENST00000538786 BTBD18B2RXH4 712 aa17.11■□□□□ 0.33
ATL3-203ENST00000538786 TSPY3P0CV98 308 aa17.11■□□□□ 0.33
ATL3-203ENST00000538786 TSPY8P0CW00 308 aa17.11■□□□□ 0.33
ATL3-203ENST00000538786 KIF5BP33176 963 aa17.11■□□□□ 0.33
ATL3-203ENST00000538786 PKN1Q16512 942 aa17.11■□□□□ 0.33
ATL3-203ENST00000538786 TRIM44Q96DX7 344 aaPredicted RBP17.11■□□□□ 0.33
ATL3-203ENST00000538786 MAP3K14Q99558 947 aa17.11■□□□□ 0.33
ATL3-203ENST00000538786 V9GY48 417 aaPredicted RBP17.11■□□□□ 0.33
ATL3-203ENST00000538786 DDX60LQ5H9U9 1706 aaKnown RBP17.11■□□□□ 0.33
ATL3-203ENST00000538786 PPP6R2O75170 966 aa17.11■□□□□ 0.33
ATL3-203ENST00000538786 RASA1P20936 1047 aa17.11■□□□□ 0.33
ATL3-203ENST00000538786 TYRO3Q06418 890 aa17.11■□□□□ 0.33
ATL3-203ENST00000538786 CKAP2LQ8IYA6 745 aa17.11■□□□□ 0.33
ATL3-203ENST00000538786 JMYQ8N9B5 988 aa17.11■□□□□ 0.33
ATL3-203ENST00000538786 SLC44A5Q8NCS7 719 aa17.11■□□□□ 0.33
ATL3-203ENST00000538786 TTF2Q9UNY4 1162 aaKnown RBP17.11■□□□□ 0.33
ATL3-203ENST00000538786 KINO60870 393 aaKnown RBP17.1■□□□□ 0.33
ATL3-203ENST00000538786 CDK8P49336 464 aa17.1■□□□□ 0.33
ATL3-203ENST00000538786 PTPAQ15257 358 aa17.1■□□□□ 0.33
ATL3-203ENST00000538786 QSER1Q2KHR3 1735 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms