RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 IGHA2P01877 340 aa5.62□□□□□ -1.51
SNHG1-208ENST00000538266 EIF2AK2P19525 551 aaKnown RBP5.62□□□□□ -1.51
SNHG1-208ENST00000538266 CCDC27Q2M243 656 aa5.62□□□□□ -1.51
SNHG1-208ENST00000538266 COL13A1Q5TAT6 717 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-208ENST00000538266 KANK3Q6NY19 840 aa5.62□□□□□ -1.51
SNHG1-208ENST00000538266 C20orf204Q6ZNR8 217 aa5.62□□□□□ -1.51
SNHG1-208ENST00000538266 FAM196AQ6ZSG2 479 aa5.62□□□□□ -1.51
SNHG1-208ENST00000538266 CCDC146Q8IYE0 955 aa5.62□□□□□ -1.51
SNHG1-208ENST00000538266 IFNL2Q8IZJ0 200 aa5.62□□□□□ -1.51
SNHG1-208ENST00000538266 MICALL1Q8N3F8 863 aa5.62□□□□□ -1.51
SNHG1-208ENST00000538266 BEND7Q8N7W2 519 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-208ENST00000538266 SNX29Q8TEQ0 813 aa5.62□□□□□ -1.51
SNHG1-208ENST00000538266 PNISRQ8TF01 805 aaKnown RBP5.62□□□□□ -1.51
SNHG1-208ENST00000538266 RTF1Q92541 710 aaKnown RBP5.62□□□□□ -1.51
SNHG1-208ENST00000538266 ASB16Q96NS5 453 aa5.62□□□□□ -1.51
SNHG1-208ENST00000538266 RBSNQ9H1K0 784 aa5.62□□□□□ -1.51
SNHG1-208ENST00000538266 CHRDQ9H2X0 955 aa5.62□□□□□ -1.51
SNHG1-208ENST00000538266 SALL4Q9UJQ4 1053 aa5.62□□□□□ -1.51
SNHG1-208ENST00000538266 MAP3K5Q99683 1374 aa5.62□□□□□ -1.51
SNHG1-208ENST00000538266 SHANK3Q9BYB0 1731 aa5.62□□□□□ -1.51
SNHG1-208ENST00000538266 GNAT3A8MTJ3 354 aa5.61□□□□□ -1.51
SNHG1-208ENST00000538266 M0R082 166 aa5.61□□□□□ -1.51
SNHG1-208ENST00000538266 GPR182O15218 404 aa5.61□□□□□ -1.51
SNHG1-208ENST00000538266 CYP27B1O15528 508 aa5.61□□□□□ -1.51
SNHG1-208ENST00000538266 LILRB5O75023 590 aa5.61□□□□□ -1.51
SNHG1-208ENST00000538266 POLR3DP05423 398 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-208ENST00000538266 HOXD8P13378 290 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-208ENST00000538266 PHKG2P15735 406 aa5.61□□□□□ -1.51
SNHG1-208ENST00000538266 SNRPNP63162 240 aaKnown RBP5.61□□□□□ -1.51
SNHG1-208ENST00000538266 LMOD3Q0VAK6 560 aa5.61□□□□□ -1.51
SNHG1-208ENST00000538266 ORC1Q13415 861 aa5.61□□□□□ -1.51
SNHG1-208ENST00000538266 MTHFSDQ2M296 383 aaKnown RBP5.61□□□□□ -1.51
SNHG1-208ENST00000538266 AKAP4Q5JQC9 854 aa5.61□□□□□ -1.51
SNHG1-208ENST00000538266 PERM1Q5SV97 790 aa5.61□□□□□ -1.51
SNHG1-208ENST00000538266 C8orf86Q6ZUL3 223 aa5.61□□□□□ -1.51
SNHG1-208ENST00000538266 MARCH10Q8NA82 808 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-208ENST00000538266 ZNF417Q8TAU3 575 aa5.61□□□□□ -1.51
SNHG1-208ENST00000538266 SYTL4Q96C24 671 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-208ENST00000538266 DCAF5Q96JK2 942 aa5.61□□□□□ -1.51
SNHG1-208ENST00000538266 PHACTR3Q96KR7 559 aa5.61□□□□□ -1.51
SNHG1-208ENST00000538266 PLEKHF1Q96S99 279 aa5.61□□□□□ -1.51
SNHG1-208ENST00000538266 ZNF587Q96SQ5 575 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-208ENST00000538266 SMG9Q9H0W8 520 aaKnown RBP5.61□□□□□ -1.51
SNHG1-208ENST00000538266 STK17AQ9UEE5 414 aa5.61□□□□□ -1.51
SNHG1-208ENST00000538266 DOT1LQ8TEK3 1739 aa5.6□□□□□ -1.51
SNHG1-208ENST00000538266 CNTNAP5Q8WYK1 1306 aa5.6□□□□□ -1.51
SNHG1-208ENST00000538266 ANKRD33BA6NCL7 494 aa5.6□□□□□ -1.51
SNHG1-208ENST00000538266 EIF1AYO14602 144 aaKnown RBP5.6□□□□□ -1.51
SNHG1-208ENST00000538266 TREHO43280 583 aa5.6□□□□□ -1.51
SNHG1-208ENST00000538266 CPNE3O75131 537 aaKnown RBP5.6□□□□□ -1.51
SNHG1-208ENST00000538266 KIF4AO95239 1232 aa5.6□□□□□ -1.51
SNHG1-208ENST00000538266 ALBP02768 609 aa5.6□□□□□ -1.51
SNHG1-208ENST00000538266 CABP4P57796 275 aa5.6□□□□□ -1.51
SNHG1-208ENST00000538266 DSC3Q14574 896 aa5.6□□□□□ -1.51
SNHG1-208ENST00000538266 NFE2L2Q16236 605 aa5.6□□□□□ -1.51
SNHG1-208ENST00000538266 TMCO4Q5TGY1 634 aa5.6□□□□□ -1.51
SNHG1-208ENST00000538266 MPRIPQ6WCQ1 1025 aa5.6□□□□□ -1.51
SNHG1-208ENST00000538266 CEP120Q8N960 986 aa5.6□□□□□ -1.51
SNHG1-208ENST00000538266 ALKBH8Q96BT7 664 aaKnown RBP5.6□□□□□ -1.51
SNHG1-208ENST00000538266 PLD4Q96BZ4 506 aa5.6□□□□□ -1.51
SNHG1-208ENST00000538266 LPIN3Q9BQK8 851 aa5.6□□□□□ -1.51
SNHG1-208ENST00000538266 DNAJC25Q9H1X3 360 aa5.6□□□□□ -1.51
SNHG1-208ENST00000538266 JPH1Q9HDC5 661 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-208ENST00000538266 FRRS1LQ9P0K9 344 aa5.6□□□□□ -1.51
SNHG1-208ENST00000538266 NAGPAQ9UK23 515 aa5.6□□□□□ -1.51
SNHG1-208ENST00000538266 RRP7AQ9Y3A4 280 aaKnown RBP5.6□□□□□ -1.51
SNHG1-208ENST00000538266 BCL9O00512 1426 aa5.59□□□□□ -1.51
SNHG1-208ENST00000538266 APAF1O14727 1248 aa5.59□□□□□ -1.51
SNHG1-208ENST00000538266 HTATSF1O43719 755 aaKnown RBP5.59□□□□□ -1.51
SNHG1-208ENST00000538266 TRIM37O94972 964 aa5.59□□□□□ -1.51
SNHG1-208ENST00000538266 EDN3P14138 238 aa5.59□□□□□ -1.51
SNHG1-208ENST00000538266 HOXB4P17483 251 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-208ENST00000538266 TMPOP42166 694 aaKnown RBP5.59□□□□□ -1.51
SNHG1-208ENST00000538266 RIPK4P57078 832 aa5.59□□□□□ -1.51
SNHG1-208ENST00000538266 CALD1Q05682 793 aaKnown RBP5.59□□□□□ -1.51
SNHG1-208ENST00000538266 TEFQ10587 303 aa5.59□□□□□ -1.51
SNHG1-208ENST00000538266 USPL1Q5W0Q7 1092 aa5.59□□□□□ -1.51
SNHG1-208ENST00000538266 CEP135Q66GS9 1140 aa5.59□□□□□ -1.51
SNHG1-208ENST00000538266 LINC00114Q6XXX2 140 aa5.59□□□□□ -1.51
SNHG1-208ENST00000538266 PODNQ7Z5L7 613 aa5.59□□□□□ -1.51
SNHG1-208ENST00000538266 NGEFQ8N5V2 710 aa5.59□□□□□ -1.51
SNHG1-208ENST00000538266 TTC9Q92623 222 aa5.59□□□□□ -1.51
SNHG1-208ENST00000538266 SCARF2Q96GP6 870 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-208ENST00000538266 ACSBG1Q96GR2 724 aa5.59□□□□□ -1.51
SNHG1-208ENST00000538266 CSRNP1Q96S65 589 aa5.59□□□□□ -1.51
SNHG1-208ENST00000538266 TMOD3Q9NYL9 352 aa5.59□□□□□ -1.51
SNHG1-208ENST00000538266 MKL2Q9ULH7 1088 aa5.59□□□□□ -1.51
SNHG1-208ENST00000538266 SCN11AQ9UI33 1791 aa5.59□□□□□ -1.51
SNHG1-208ENST00000538266 NHSQ6T4R5 1651 aa5.59□□□□□ -1.52
SNHG1-208ENST00000538266 KAT6BQ8WYB5 2073 aa5.59□□□□□ -1.52
SNHG1-208ENST00000538266 DLG5Q8TDM6 1919 aa5.58□□□□□ -1.52
SNHG1-208ENST00000538266 KDM6AO15550 1401 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-208ENST00000538266 TOGARAM1Q9Y4F4 1720 aa5.58□□□□□ -1.52
SNHG1-208ENST00000538266 ERVV-2B6SEH9 535 aa5.58□□□□□ -1.52
SNHG1-208ENST00000538266 RNMTO43148 476 aaKnown RBP5.58□□□□□ -1.52
SNHG1-208ENST00000538266 TRPA1O75762 1119 aa5.58□□□□□ -1.52
SNHG1-208ENST00000538266 SMNDC1O75940 238 aaKnown RBP eCLIP5.58□□□□□ -1.523e-14■■■■■ 31.4
SNHG1-208ENST00000538266 MAPK8P45983 427 aa5.58□□□□□ -1.52
SNHG1-208ENST00000538266 DGKGP49619 791 aa5.58□□□□□ -1.52
SNHG1-208ENST00000538266 AFF1P51825 1210 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms