RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 CCDC85CA6NKD9 419 aa8.42□□□□□ -1.06
MSH6-209ENST00000538136 PDE4CQ08493 712 aa8.42□□□□□ -1.06
MSH6-209ENST00000538136 STRBPQ96SI9 672 aaKnown RBP8.42□□□□□ -1.06
MSH6-209ENST00000538136 ORC3Q9UBD5 711 aaPredicted RBP8.42□□□□□ -1.06
MSH6-209ENST00000538136 AAMPQ13685 434 aa8.42□□□□□ -1.06
MSH6-209ENST00000538136 LARP1BQ659C4 914 aaKnown RBP8.42□□□□□ -1.06
MSH6-209ENST00000538136 FAM173BQ6P4H8 233 aa8.42□□□□□ -1.06
MSH6-209ENST00000538136 TTC16Q8NEE8 873 aa8.42□□□□□ -1.06
MSH6-209ENST00000538136 IL25Q9H293 177 aa8.42□□□□□ -1.06
MSH6-209ENST00000538136 RAVER2Q9HCJ3 691 aaKnown RBP8.42□□□□□ -1.06
MSH6-209ENST00000538136 TNKSO95271 1327 aa8.42□□□□□ -1.06
MSH6-209ENST00000538136 XIRP1Q702N8 1843 aaKnown RBP8.41□□□□□ -1.06
MSH6-209ENST00000538136 CALM1P0DP23 149 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 CALM2P0DP24 149 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 CALM3P0DP25 149 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 AKNAD1Q5T1N1 836 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 PNMA1Q8ND90 353 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 SMARCC2Q8TAQ2 1214 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 PI4K2BQ8TCG2 481 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 GJB4Q9NTQ9 266 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 CYP21A2P08686 494 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 EEF2P13639 858 aaKnown RBP8.41□□□□□ -1.06
MSH6-209ENST00000538136 HOXA13P31271 388 aaPredicted RBP8.41□□□□□ -1.06
MSH6-209ENST00000538136 CA8P35219 290 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 HIRAP54198 1017 aaPredicted RBP8.41□□□□□ -1.06
MSH6-209ENST00000538136 KIF22Q14807 665 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 RTN1Q16799 776 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 APOBEC3FQ8IUX4 373 aaKnown RBP8.41□□□□□ -1.06
MSH6-209ENST00000538136 SMC1BQ8NDV3 1235 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 OPTNQ96CV9 577 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 CEP95Q96GE4 821 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 PCDH10Q9P2E7 1040 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 MYO7AQ13402 2215 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 PARP1P09874 1014 aaKnown RBP8.41□□□□□ -1.06
MSH6-209ENST00000538136 TTBK2Q6IQ55 1244 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 EP400NLQ6ZTU2 488 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 MAEAQ7L5Y9 396 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 PDILTQ8N807 584 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 PPP1R16BQ96T49 567 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 PSMD1Q99460 953 aa8.41□□□□□ -1.06
MSH6-209ENST00000538136 IRF6O14896 467 aa8.4□□□□□ -1.06
MSH6-209ENST00000538136 SLC27A2O14975 620 aa8.4□□□□□ -1.06
MSH6-209ENST00000538136 SGSM2O43147 1006 aa8.4□□□□□ -1.06
MSH6-209ENST00000538136 RASGRP4Q8TDF6 673 aa8.4□□□□□ -1.06
MSH6-209ENST00000538136 COA7Q96BR5 231 aa8.4□□□□□ -1.06
MSH6-209ENST00000538136 FLT1P17948 1338 aa8.4□□□□□ -1.06
MSH6-209ENST00000538136 A0A087WWV3 80 aa8.4□□□□□ -1.06
MSH6-209ENST00000538136 TESPA1A2RU30 521 aaPredicted RBP8.4□□□□□ -1.06
MSH6-209ENST00000538136 E7EWF7 191 aa8.4□□□□□ -1.06
MSH6-209ENST00000538136 TNPO2O14787 897 aaKnown RBP8.4□□□□□ -1.06
MSH6-209ENST00000538136 TOMM70O94826 608 aa8.4□□□□□ -1.06
MSH6-209ENST00000538136 ASNSP08243 561 aa8.4□□□□□ -1.06
MSH6-209ENST00000538136 GNAT2P19087 354 aa8.4□□□□□ -1.06
MSH6-209ENST00000538136 AGBL3Q8NEM8 1001 aa8.4□□□□□ -1.06
MSH6-209ENST00000538136 ZSWIM5Q9P217 1185 aa8.4□□□□□ -1.06
MSH6-209ENST00000538136 KCNJ14Q9UNX9 436 aa8.4□□□□□ -1.06
MSH6-209ENST00000538136 ABCC6O95255 1503 aa8.4□□□□□ -1.06
MSH6-209ENST00000538136 XBP1P17861 261 aa8.4□□□□□ -1.07
MSH6-209ENST00000538136 MAP3K9P80192 1104 aa8.4□□□□□ -1.07
MSH6-209ENST00000538136 ERICH6BQ5W0A0 696 aa8.4□□□□□ -1.07
MSH6-209ENST00000538136 APOBEC3HQ6NTF7 200 aaKnown RBP8.4□□□□□ -1.07
MSH6-209ENST00000538136 KRT23Q9C075 422 aa8.4□□□□□ -1.07
MSH6-209ENST00000538136 OSBPL5Q9H0X9 879 aaPredicted RBP8.4□□□□□ -1.07
MSH6-209ENST00000538136 MYO3BQ8WXR4 1341 aa8.4□□□□□ -1.07
MSH6-209ENST00000538136 MTX1Q13505 466 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 BICD2Q8TD16 824 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 NOD1Q9Y239 953 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 GON4LQ3T8J9 2241 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 MON2Q7Z3U7 1717 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 GSG1L2A8MUP6 293 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 USP17L10C9JJH3 530 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 CUL5Q93034 780 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 ZNF668Q96K58 619 aaPredicted RBP8.39□□□□□ -1.07
MSH6-209ENST00000538136 CAPNS2Q96L46 248 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 CCPG1Q9ULG6 757 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 TRIM17Q9Y577 477 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 KLRF2D3W0D1 207 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 BACH1O14867 736 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 PRELPP51888 382 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 UBE3CQ15386 1083 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 CTR9Q6PD62 1173 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 KRT32Q14532 448 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 ZMYM1Q5SVZ6 1142 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 ANKRD13AQ8IZ07 590 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 CHAMP1Q96JM3 812 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 BRMS1Q9HCU9 246 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 VPS54Q9P1Q0 977 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 FBXO3Q9UK99 471 aa8.39□□□□□ -1.07
MSH6-209ENST00000538136 NHSL1Q5SYE7 1610 aa8.38□□□□□ -1.07
MSH6-209ENST00000538136 CACNA1GO43497 2377 aa8.38□□□□□ -1.07
MSH6-209ENST00000538136 CCDC194A0A1B0GVG4 234 aa8.38□□□□□ -1.07
MSH6-209ENST00000538136 F5H6K3 240 aa8.38□□□□□ -1.07
MSH6-209ENST00000538136 VIL1P09327 827 aaKnown RBP8.38□□□□□ -1.07
MSH6-209ENST00000538136 ATN1P54259 1190 aaPredicted RBP8.38□□□□□ -1.07
MSH6-209ENST00000538136 KLRC3Q07444 240 aa8.38□□□□□ -1.07
MSH6-209ENST00000538136 SEPT14Q6ZU15 432 aa8.38□□□□□ -1.07
MSH6-209ENST00000538136 TBC1D10CQ8IV04 446 aa8.38□□□□□ -1.07
MSH6-209ENST00000538136 RAET1EQ8TD07 263 aa8.38□□□□□ -1.07
MSH6-209ENST00000538136 HELLSQ9NRZ9 838 aa8.38□□□□□ -1.07
MSH6-209ENST00000538136 KIF3AQ9Y496 699 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms