RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 KARSQ15046 597 aaKnown RBP12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 SKIDA1Q1XH10 827 aa12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 C11orf91Q3C1V1 193 aa12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 CPLX2Q6PUV4 134 aaKnown RBP12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 NLRP10Q86W26 655 aa12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 RNF217Q8TC41 542 aa12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 RHOXF2Q9BQY4 288 aa12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 CCNL1Q9UK58 526 aaPredicted RBP12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 UBN2Q6ZU65 1347 aa12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 COL15A1P39059 1388 aa12.9□□□□□ -0.34
SEMA4D-221ENST00000537934 TMEM232C9JQI7 657 aa12.9□□□□□ -0.35
SEMA4D-221ENST00000537934 MYL5Q02045 173 aa12.9□□□□□ -0.35
SEMA4D-221ENST00000537934 ECHDC1Q9NTX5 307 aa12.9□□□□□ -0.35
SEMA4D-221ENST00000537934 ZNF831Q5JPB2 1677 aa12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 ERVV-1B6SEH8 477 aa12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 CAMTA2O94983 1202 aa12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 RFX5P48382 616 aaPredicted RBP12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 ZNF772Q68DY9 489 aaPredicted RBP12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 IGSF22Q8N9C0 903 aa12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 RTEL1Q9NZ71 1219 aa12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 ATXN2Q99700 1313 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 ANKRD36CQ5JPF3 1778 aa12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 ERCC3P19447 782 aa12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 IRAK1P51617 712 aa12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 PTPN12Q05209 780 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 NMIQ13287 307 aaPredicted RBP12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 AMIGO3Q86WK7 504 aa12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 TC2NQ8N9U0 490 aa12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 FAXDC2Q96IV6 333 aa12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 FAM227BQ96M60 508 aa12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 CCDC85AQ96PX6 553 aaPredicted RBP12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 MRPL44Q9H9J2 332 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 VEZTQ9HBM0 779 aa12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 TAF6LQ9Y6J9 622 aa12.89□□□□□ -0.35
SEMA4D-221ENST00000537934 CHUKO15111 745 aa12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 SASH1O94885 1247 aa12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 TRIM37O94972 964 aa12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 CCDC175P0C221 793 aa12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 KRT32Q14532 448 aa12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 JMYQ8N9B5 988 aa12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 ZBTB38Q8NAP3 1195 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 XAGE2Q96GT9 111 aa12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 GPATCH3Q96I76 525 aa12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 IRX2Q9BZI1 471 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 CTAGE15A4D2H0 777 aa12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 KIF5CO60282 957 aa12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 PCCAP05165 728 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 CTAGE8P0CG41 777 aa12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 FNTAP49354 379 aa12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 CTAGE6Q86UF2 777 aa12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 CTAGE4Q8IX94 777 aa12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 AMOTL1Q8IY63 956 aa12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 KAT14Q9H8E8 782 aa12.88□□□□□ -0.35
SEMA4D-221ENST00000537934 LY75O60449 1722 aa12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 TMCO5BA8MYB1 307 aa12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 RDXP35241 583 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 G3BP1Q13283 466 aaKnown RBP eCLIP12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 WHAMMP3Q1A5X7 153 aa12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 KIF4BQ2VIQ3 1234 aa12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 PREPLQ4J6C6 727 aaPredicted RBP12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 ILDR1Q86SU0 546 aaPredicted RBP12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 CLASRPQ8N2M8 674 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 PDILTQ8N807 584 aa12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 ZKSCAN4Q969J2 545 aaPredicted RBP12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 DESI2Q9BSY9 194 aa12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 INTS13Q9NVM9 706 aa12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 HPCAL4Q9UM19 191 aa12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 CAPN7Q9Y6W3 813 aa12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 CNTNAP4Q9C0A0 1308 aa12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 SHTN1A0MZ66 631 aa12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 GNPATO15228 680 aa12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 ZNF202O95125 648 aa12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 HSP90B1P14625 803 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 GCFC2P16383 781 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 FAM196AQ6ZSG2 479 aa12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 ZNF34Q8IZ26 560 aa12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 NSUN7Q8NE18 718 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 FAM76AQ8TAV0 307 aa12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 LRRC4BQ9NT99 713 aa12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 TRMT112Q9UI30 125 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-221ENST00000537934 CTAGE9A4FU28 777 aa12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 FSBPO95073 299 aa12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 NF2P35240 595 aa12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 Q6ZUG5 572 aa12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 COPRSQ9NQ92 184 aa12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 FANCLQ9NW38 375 aa12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 ZC3H4Q9UPT8 1303 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 PFKFB2O60825 505 aa12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 ADKP55263 362 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 PPFIA1Q13136 1202 aa12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 SPECC1LQ69YQ0 1117 aa12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 TEX11Q8IYF3 940 aa12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 LINC00301Q8NCQ3 95 aa12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 BCAS4Q8TDM0 211 aa12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 KCNG4Q8TDN1 519 aa12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 N4BP2L2Q92802 583 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 ZNF594Q96JF6 807 aaPredicted RBP12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 LZTFL1Q9NQ48 299 aa12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 TUBE1Q9UJT0 475 aa12.86□□□□□ -0.35
SEMA4D-221ENST00000537934 TAF1LQ8IZX4 1826 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms