RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 MYSM1Q5VVJ2 828 aa11.34□□□□□ -0.59
GGA3-201ENST00000537686 IFNL3Q8IZI9 196 aa11.34□□□□□ -0.59
GGA3-201ENST00000537686 KRT83P78385 493 aa11.34□□□□□ -0.59
GGA3-201ENST00000537686 PPARAQ07869 468 aa11.34□□□□□ -0.59
GGA3-201ENST00000537686 CERS3Q8IU89 383 aa11.34□□□□□ -0.59
GGA3-201ENST00000537686 CCDC65Q8IXS2 484 aa11.34□□□□□ -0.59
GGA3-201ENST00000537686 FERMT2Q96AC1 680 aa11.34□□□□□ -0.59
GGA3-201ENST00000537686 ARFGAP3Q9NP61 516 aa11.34□□□□□ -0.59
GGA3-201ENST00000537686 SLU7O95391 586 aaKnown RBP11.33□□□□□ -0.6
GGA3-201ENST00000537686 MCM6Q14566 821 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 BMS1Q14692 1282 aaKnown RBP11.33□□□□□ -0.6
GGA3-201ENST00000537686 NONOQ15233 471 aaKnown RBP eCLIP11.33□□□□□ -0.6
GGA3-201ENST00000537686 KIAA0753Q2KHM9 967 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 USPL1Q5W0Q7 1092 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 CMTR1Q8N1G2 835 aaKnown RBP11.33□□□□□ -0.6
GGA3-201ENST00000537686 GTPBP4Q9BZE4 634 aaKnown RBP11.33□□□□□ -0.6
GGA3-201ENST00000537686 IMPG2Q9BZV3 1241 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 ZSWIM6Q9HCJ5 1215 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 NCAPD2Q15021 1401 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 CRKLP46109 303 aaKnown RBP11.33□□□□□ -0.6
GGA3-201ENST00000537686 KCNQ4P56696 695 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 ZNF445P59923 1031 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 CPXCR1Q8N123 301 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 CHAMP1Q96JM3 812 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 UIMC1Q96RL1 719 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 PLVAPQ9BX97 442 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 TTF2Q9UNY4 1162 aaKnown RBP11.33□□□□□ -0.6
GGA3-201ENST00000537686 SHTN1A0MZ66 631 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 CCNT1O60563 726 aaKnown RBP11.33□□□□□ -0.6
GGA3-201ENST00000537686 IL6STP40189 918 aaPredicted RBP11.33□□□□□ -0.6
GGA3-201ENST00000537686 CHRNDQ07001 517 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 CKAP4Q07065 602 aaKnown RBP11.33□□□□□ -0.6
GGA3-201ENST00000537686 ADCK5Q3MIX3 580 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 SYT10Q6XYQ8 523 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 MAATS1Q7Z4T9 603 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 ZNF274Q96GC6 653 aaPredicted RBP11.33□□□□□ -0.6
GGA3-201ENST00000537686 OSBPL3Q9H4L5 887 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 CBX8Q9HC52 389 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 ARHGEF10LQ9HCE6 1279 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 NFE2L3Q9Y4A8 694 aa11.33□□□□□ -0.6
GGA3-201ENST00000537686 B4DLN1 442 aa11.32□□□□□ -0.6
GGA3-201ENST00000537686 CHMP2AO43633 222 aa11.32□□□□□ -0.6
GGA3-201ENST00000537686 CTR9Q6PD62 1173 aa11.32□□□□□ -0.6
GGA3-201ENST00000537686 CNGA4Q8IV77 575 aa11.32□□□□□ -0.6
GGA3-201ENST00000537686 USP28Q96RU2 1077 aa11.32□□□□□ -0.6
GGA3-201ENST00000537686 CTAGE9A4FU28 777 aa11.32□□□□□ -0.6
GGA3-201ENST00000537686 DCAF17Q5H9S7 520 aaPredicted RBP11.32□□□□□ -0.6
GGA3-201ENST00000537686 RGS22Q8NE09 1264 aa11.32□□□□□ -0.6
GGA3-201ENST00000537686 MAP4K1Q92918 833 aa11.32□□□□□ -0.6
GGA3-201ENST00000537686 SYNCQ9H7C4 482 aa11.32□□□□□ -0.6
GGA3-201ENST00000537686 LRWD1Q9UFC0 647 aa11.32□□□□□ -0.6
GGA3-201ENST00000537686 MTMR6Q9Y217 621 aa11.32□□□□□ -0.6
GGA3-201ENST00000537686 HEG1Q9ULI3 1381 aa11.32□□□□□ -0.6
GGA3-201ENST00000537686 ADGRB2O60241 1585 aa11.32□□□□□ -0.6
GGA3-201ENST00000537686 TNKSO95271 1327 aa11.31□□□□□ -0.6
GGA3-201ENST00000537686 NRKQ7Z2Y5 1582 aa11.31□□□□□ -0.6
GGA3-201ENST00000537686 RPL13P26373 211 aaKnown RBP11.31□□□□□ -0.6
GGA3-201ENST00000537686 ACTN2P35609 894 aa11.31□□□□□ -0.6
GGA3-201ENST00000537686 ZNF569Q5MCW4 686 aa11.31□□□□□ -0.6
GGA3-201ENST00000537686 MSL1Q68DK7 614 aa11.31□□□□□ -0.6
GGA3-201ENST00000537686 IGSF22Q8N9C0 903 aa11.31□□□□□ -0.6
GGA3-201ENST00000537686 FAM212AQ96EL1 285 aa11.31□□□□□ -0.6
GGA3-201ENST00000537686 BAG1Q99933 345 aaPredicted RBP11.31□□□□□ -0.6
GGA3-201ENST00000537686 GOLGA6L10A0A0M3HER8 536 aa11.31□□□□□ -0.6
GGA3-201ENST00000537686 KRT25Q7Z3Z0 450 aa11.31□□□□□ -0.6
GGA3-201ENST00000537686 REXO1Q8N1G1 1221 aaKnown RBP11.31□□□□□ -0.6
GGA3-201ENST00000537686 CSGALNACT2Q8N6G5 542 aa11.31□□□□□ -0.6
GGA3-201ENST00000537686 MLKLQ8NB16 471 aa11.31□□□□□ -0.6
GGA3-201ENST00000537686 SNX29Q8TEQ0 813 aa11.31□□□□□ -0.6
GGA3-201ENST00000537686 FANCCQ00597 558 aa11.31□□□□□ -0.6
GGA3-201ENST00000537686 RAPGEF1Q13905 1077 aa11.31□□□□□ -0.6
GGA3-201ENST00000537686 FANCBQ8NB91 859 aa11.31□□□□□ -0.6
GGA3-201ENST00000537686 NAP1L4Q99733 375 aaKnown RBP11.31□□□□□ -0.6
GGA3-201ENST00000537686 CTNND2Q9UQB3 1225 aa11.31□□□□□ -0.6
GGA3-201ENST00000537686 AKR1B15C9JRZ8 316 aaPredicted RBP11.3□□□□□ -0.6
GGA3-201ENST00000537686 PPIP5K2O43314 1243 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 CYP21A2P08686 494 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 MAP2K1Q02750 393 aaPredicted RBP11.3□□□□□ -0.6
GGA3-201ENST00000537686 NOC4LQ9BVI4 516 aaKnown RBP11.3□□□□□ -0.6
GGA3-201ENST00000537686 LSG1Q9H089 658 aaKnown RBP11.3□□□□□ -0.6
GGA3-201ENST00000537686 USP40Q9NVE5 1235 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 ARPP21Q9UBL0 812 aaPredicted RBP11.3□□□□□ -0.6
GGA3-201ENST00000537686 CEMIPQ8WUJ3 1361 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 ERCC3P19447 782 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 ADCY7P51828 1080 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 HERC4Q5GLZ8 1057 aaPredicted RBP11.3□□□□□ -0.6
GGA3-201ENST00000537686 NSMFQ6X4W1 530 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 KIAA0825Q8IV33 1275 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 TEKT1Q969V4 418 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 PODXL2Q9NZ53 605 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 CFBP00751 764 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 ALDH1B1P30837 517 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 GTF2F1P35269 517 aaKnown RBP eCLIP11.3□□□□□ -0.6
GGA3-201ENST00000537686 DLGAP5Q15398 846 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 USH1GQ495M9 461 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 HAUS3Q68CZ6 603 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 PI16Q6UXB8 463 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 PNMA1Q8ND90 353 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 CAPZA3Q96KX2 299 aa11.3□□□□□ -0.6
GGA3-201ENST00000537686 SRRTQ9BXP5 876 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms