RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 FAM200AQ8TCP9 573 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 SCAND2PQ9GZW5 306 aaPredicted RBP13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 ALDH8A1Q9H2A2 487 aaPredicted RBP13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 ECHDC1Q9NTX5 307 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 OGFRQ9NZT2 677 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 ARAP2Q8WZ64 1704 aa13.52□□□□□ -0.24
CHRNB1-202ENST00000536404 MANSC4A6NHS7 340 aaPredicted RBP13.52□□□□□ -0.25
CHRNB1-202ENST00000536404 HDLBPQ00341 1268 aaKnown RBP13.52□□□□□ -0.25
CHRNB1-202ENST00000536404 MLLT1Q03111 559 aaPredicted RBP13.52□□□□□ -0.25
CHRNB1-202ENST00000536404 SYCP1Q15431 976 aa13.52□□□□□ -0.25
CHRNB1-202ENST00000536404 IFNL1Q8IU54 200 aa13.52□□□□□ -0.25
CHRNB1-202ENST00000536404 KIAA1524Q8TCG1 905 aa13.52□□□□□ -0.25
CHRNB1-202ENST00000536404 LPIN2Q92539 896 aa13.52□□□□□ -0.25
CHRNB1-202ENST00000536404 TEKT1Q969V4 418 aa13.52□□□□□ -0.25
CHRNB1-202ENST00000536404 PA2G4Q9UQ80 394 aaKnown RBP13.52□□□□□ -0.25
CHRNB1-202ENST00000536404 MTMR6Q9Y217 621 aa13.52□□□□□ -0.25
CHRNB1-202ENST00000536404 UNCXA6NJT0 531 aa13.51□□□□□ -0.25
CHRNB1-202ENST00000536404 IGF2BP3O00425 579 aaKnown RBP eCLIP13.51□□□□□ -0.25
CHRNB1-202ENST00000536404 ZBTB48P10074 688 aaPredicted RBP13.51□□□□□ -0.25
CHRNB1-202ENST00000536404 FOXD4L6Q3SYB3 417 aaPredicted RBP13.51□□□□□ -0.25
CHRNB1-202ENST00000536404 FOXD4L3Q6VB84 417 aaPredicted RBP13.51□□□□□ -0.25
CHRNB1-202ENST00000536404 ANKRD13AQ8IZ07 590 aa13.51□□□□□ -0.25
CHRNB1-202ENST00000536404 SECISBP2LQ93073 1101 aaKnown RBP13.51□□□□□ -0.25
CHRNB1-202ENST00000536404 ARID3AQ99856 593 aa13.51□□□□□ -0.25
CHRNB1-202ENST00000536404 ELP3Q9H9T3 547 aa13.51□□□□□ -0.25
CHRNB1-202ENST00000536404 DDX19AQ9NUU7 478 aaKnown RBP13.51□□□□□ -0.25
CHRNB1-202ENST00000536404 CEP126Q9P2H0 1117 aa13.51□□□□□ -0.25
CHRNB1-202ENST00000536404 GOLGA6L4A6NEF3 574 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 CIAO1O76071 339 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 IFIT2P09913 472 aaKnown RBP13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 TNNI2P48788 182 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 INHBEP58166 350 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 ATP2B3Q16720 1220 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 APOBEC3HQ6NTF7 200 aaKnown RBP13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 CWC27Q6UX04 472 aaKnown RBP13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 CNKSR2Q8WXI2 1034 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 ZDHHC15Q96MV8 337 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 JAKMIP1Q96N16 626 aaKnown RBP13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 MRIQ9BWK5 157 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 CFHR5Q9BXR6 569 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 NUP62CLQ9H1M0 184 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 EFCC1Q9HA90 598 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 FKTNO75072 461 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 SOX10P56693 466 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 NOM1Q5C9Z4 860 aaKnown RBP13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 CCDC83Q8IWF9 413 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 RASEFQ8IZ41 740 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 TTC12Q9H892 705 aaPredicted RBP13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 HMG20BQ9P0W2 317 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 FBXO3Q9UK99 471 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 HPS5Q9UPZ3 1129 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 SUGT1Q9Y2Z0 365 aa13.5□□□□□ -0.25
CHRNB1-202ENST00000536404 ALDH1A1P00352 501 aa13.49□□□□□ -0.25
CHRNB1-202ENST00000536404 ADORA1P30542 326 aa13.49□□□□□ -0.25
CHRNB1-202ENST00000536404 MAP3K9P80192 1104 aa13.49□□□□□ -0.25
CHRNB1-202ENST00000536404 LARP1BQ659C4 914 aaKnown RBP13.49□□□□□ -0.25
CHRNB1-202ENST00000536404 WDR66Q8TBY9 1149 aa13.49□□□□□ -0.25
CHRNB1-202ENST00000536404 OPTNQ96CV9 577 aa13.49□□□□□ -0.25
CHRNB1-202ENST00000536404 PTPN18Q99952 460 aa13.49□□□□□ -0.25
CHRNB1-202ENST00000536404 SNRKQ9NRH2 765 aa13.49□□□□□ -0.25
CHRNB1-202ENST00000536404 RNF216Q9NWF9 866 aaPredicted RBP13.49□□□□□ -0.25
CHRNB1-202ENST00000536404 GEMIN8Q9NWZ8 242 aaKnown RBP13.49□□□□□ -0.25
CHRNB1-202ENST00000536404 VPS37CA5D8V6 355 aaPredicted RBP13.48□□□□□ -0.25
CHRNB1-202ENST00000536404 IL15P40933 162 aaPredicted RBP13.48□□□□□ -0.25
CHRNB1-202ENST00000536404 PHKA1P46020 1223 aa13.48□□□□□ -0.25
CHRNB1-202ENST00000536404 PLCB2Q00722 1185 aa13.48□□□□□ -0.25
CHRNB1-202ENST00000536404 DNM1Q05193 864 aaKnown RBP13.48□□□□□ -0.25
CHRNB1-202ENST00000536404 KRT32Q14532 448 aa13.48□□□□□ -0.25
CHRNB1-202ENST00000536404 NECTIN1Q15223 517 aa13.48□□□□□ -0.25
CHRNB1-202ENST00000536404 GIMAP6Q6P9H5 292 aa13.48□□□□□ -0.25
CHRNB1-202ENST00000536404 HHIPL2Q6UWX4 724 aa13.48□□□□□ -0.25
CHRNB1-202ENST00000536404 COPRSQ9NQ92 184 aa13.48□□□□□ -0.25
CHRNB1-202ENST00000536404 OTOFQ9HC10 1997 aa13.48□□□□□ -0.25
CHRNB1-202ENST00000536404 TNRC18O15417 2968 aaPredicted RBP13.48□□□□□ -0.25
CHRNB1-202ENST00000536404 TESPA1A2RU30 521 aaPredicted RBP13.47□□□□□ -0.25
CHRNB1-202ENST00000536404 NEMFO60524 1076 aa13.47□□□□□ -0.25
CHRNB1-202ENST00000536404 VGLL4Q14135 290 aa13.47□□□□□ -0.25
CHRNB1-202ENST00000536404 DIXDC1Q155Q3 683 aa13.47□□□□□ -0.25
CHRNB1-202ENST00000536404 PKN2Q16513 984 aaKnown RBP13.47□□□□□ -0.25
CHRNB1-202ENST00000536404 ZNF710Q8N1W2 664 aa13.47□□□□□ -0.25
CHRNB1-202ENST00000536404 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.47□□□□□ -0.25
CHRNB1-202ENST00000536404 CHMP4CQ96CF2 233 aa13.47□□□□□ -0.25
CHRNB1-202ENST00000536404 IL25Q9H293 177 aa13.47□□□□□ -0.25
CHRNB1-202ENST00000536404 TMOD2Q9NZR1 351 aa13.47□□□□□ -0.25
CHRNB1-202ENST00000536404 MAST3O60307 1309 aa13.47□□□□□ -0.25
CHRNB1-202ENST00000536404 MAP4K4O95819 1239 aaPredicted RBP13.46□□□□□ -0.25
CHRNB1-202ENST00000536404 PRDX5P30044 214 aa13.46□□□□□ -0.25
CHRNB1-202ENST00000536404 TIMM10P62072 90 aa13.46□□□□□ -0.25
CHRNB1-202ENST00000536404 CTR9Q6PD62 1173 aa13.46□□□□□ -0.25
CHRNB1-202ENST00000536404 BLOC1S2Q6QNY1 142 aa13.46□□□□□ -0.25
CHRNB1-202ENST00000536404 FAM83AQ86UY5 434 aa13.46□□□□□ -0.25
CHRNB1-202ENST00000536404 MS4A4AQ96JQ5 239 aa13.46□□□□□ -0.25
CHRNB1-202ENST00000536404 TNMDQ9H2S6 317 aa13.46□□□□□ -0.25
CHRNB1-202ENST00000536404 GNL3LQ9NVN8 582 aaKnown RBP13.46□□□□□ -0.25
CHRNB1-202ENST00000536404 DAGLAQ9Y4D2 1042 aa13.46□□□□□ -0.25
CHRNB1-202ENST00000536404 PAXBP1Q9Y5B6 917 aa13.46□□□□□ -0.25
CHRNB1-202ENST00000536404 MYH13Q9UKX3 1938 aa13.46□□□□□ -0.25
CHRNB1-202ENST00000536404 TULP2O00295 520 aa13.46□□□□□ -0.26
CHRNB1-202ENST00000536404 CDC25BP30305 580 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms