RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 OXER1Q8TDS5 423 aa15.1■□□□□ 0.01
LDLR-203ENST00000535915 DUOX1Q9NRD9 1551 aa15.1■□□□□ 0.01
LDLR-203ENST00000535915 CYP2D7A0A087X1C5 515 aa15.1■□□□□ 0.01
LDLR-203ENST00000535915 NRDCO43847 1150 aa15.1■□□□□ 0.01
LDLR-203ENST00000535915 SF3B3Q15393 1217 aaKnown RBP15.1■□□□□ 0.01
LDLR-203ENST00000535915 RNF26Q9BY78 433 aaPredicted RBP15.1■□□□□ 0.01
LDLR-203ENST00000535915 CABP5Q9NP86 173 aa15.1■□□□□ 0.01
LDLR-203ENST00000535915 MINPP1Q9UNW1 487 aa15.1■□□□□ 0.01
LDLR-203ENST00000535915 POLR2DO15514 142 aaKnown RBP15.09■□□□□ 0.01
LDLR-203ENST00000535915 DHX8Q14562 1220 aaKnown RBP15.09■□□□□ 0.01
LDLR-203ENST00000535915 ENAHQ8N8S7 591 aaPredicted RBP15.09■□□□□ 0.01
LDLR-203ENST00000535915 ZSCAN10Q96SZ4 725 aaPredicted RBP15.09■□□□□ 0.01
LDLR-203ENST00000535915 KCND1Q9NSA2 647 aa15.09■□□□□ 0.01
LDLR-203ENST00000535915 CEP131Q9UPN4 1083 aa15.09■□□□□ 0.01
LDLR-203ENST00000535915 CBFA2T2O43439 604 aa15.09■□□□□ 0.01
LDLR-203ENST00000535915 XBP1P17861 261 aa15.09■□□□□ 0.01
LDLR-203ENST00000535915 PPP2R5BQ15173 497 aa15.09■□□□□ 0.01
LDLR-203ENST00000535915 CFAP100Q494V2 611 aa15.09■□□□□ 0.01
LDLR-203ENST00000535915 PPP4R3BQ5MIZ7 849 aa15.09■□□□□ 0.01
LDLR-203ENST00000535915 IFIT1BQ5T764 474 aaKnown RBP15.09■□□□□ 0.01
LDLR-203ENST00000535915 DLEC1Q9Y238 1755 aa15.09■□□□□ 0.01
LDLR-203ENST00000535915 PRDM1O75626 825 aa15.08■□□□□ 0.01
LDLR-203ENST00000535915 KCNQ4P56696 695 aa15.08■□□□□ 0.01
LDLR-203ENST00000535915 MDM2Q00987 491 aaPredicted RBP15.08■□□□□ 0.01
LDLR-203ENST00000535915 NCBP1Q09161 790 aaKnown RBP15.08■□□□□ 0.01
LDLR-203ENST00000535915 POSTNQ15063 836 aa15.08■□□□□ 0.01
LDLR-203ENST00000535915 LINC00116Q8NCU8 138 aa15.08■□□□□ 0.01
LDLR-203ENST00000535915 DPF2Q92785 391 aa15.08■□□□□ 0.01
LDLR-203ENST00000535915 CELF1Q92879 486 aaKnown RBP15.08■□□□□ 0.01
LDLR-203ENST00000535915 FAM84BQ96KN1 310 aaPredicted RBP15.08■□□□□ 0.01
LDLR-203ENST00000535915 FANCLQ9NW38 375 aa15.08■□□□□ 0.01
LDLR-203ENST00000535915 DMTNQ08495 405 aa15.08■□□□□ 0
LDLR-203ENST00000535915 E4F1Q66K89 784 aaPredicted RBP15.08■□□□□ 0
LDLR-203ENST00000535915 CATIPQ7Z7H3 387 aa15.08■□□□□ 0
LDLR-203ENST00000535915 IQCA1Q86XH1 822 aa15.08■□□□□ 0
LDLR-203ENST00000535915 ELOA2Q8IYF1 753 aaPredicted RBP15.08■□□□□ 0
LDLR-203ENST00000535915 PDILTQ8N807 584 aa15.08■□□□□ 0
LDLR-203ENST00000535915 BRIP1Q9BX63 1249 aa15.08■□□□□ 0
LDLR-203ENST00000535915 VPS54Q9P1Q0 977 aa15.08■□□□□ 0
LDLR-203ENST00000535915 SERTAD1Q9UHV2 236 aa15.08■□□□□ 0
LDLR-203ENST00000535915 BAZ2BQ9UIF8 2168 aaKnown RBP15.08■□□□□ 0
LDLR-203ENST00000535915 BMP6P22004 513 aa15.07■□□□□ 0
LDLR-203ENST00000535915 CCDC88AQ3V6T2 1871 aa15.07■□□□□ 0
LDLR-203ENST00000535915 UTP14CQ5TAP6 766 aaKnown RBP15.07■□□□□ 0
LDLR-203ENST00000535915 BCL11BQ9C0K0 894 aaPredicted RBP15.07■□□□□ 0
LDLR-203ENST00000535915 SRPRBQ9Y5M8 271 aaKnown RBP15.07■□□□□ 0
LDLR-203ENST00000535915 hCG_1642624A0A1W2PR95 340 aa15.07■□□□□ 0
LDLR-203ENST00000535915 PDE4BQ07343 736 aa15.07■□□□□ 0
LDLR-203ENST00000535915 SYCP1Q15431 976 aa15.07■□□□□ 0
LDLR-203ENST00000535915 ZNF579Q8NAF0 562 aaKnown RBP15.07■□□□□ 0
LDLR-203ENST00000535915 KIF18AQ8NI77 898 aa15.07■□□□□ 0
LDLR-203ENST00000535915 MAN1B1Q9UKM7 699 aa15.07■□□□□ 0
LDLR-203ENST00000535915 BARGINQ6ZT62 677 aa15.07■□□□□ 0
LDLR-203ENST00000535915 ZNF384Q8TF68 577 aa15.07■□□□□ 0
LDLR-203ENST00000535915 SMARCE1Q969G3 411 aa15.07■□□□□ 0
LDLR-203ENST00000535915 KIF2AO00139 706 aaPredicted RBP15.06■□□□□ 0
LDLR-203ENST00000535915 PLEKHA8P1O95397 391 aa15.06■□□□□ 0
LDLR-203ENST00000535915 PRR29P0C7W0 189 aa15.06■□□□□ 0
LDLR-203ENST00000535915 TBC1D9BQ66K14 1250 aa15.06■□□□□ 0
LDLR-203ENST00000535915 PPP1R13BQ96KQ4 1090 aa15.06■□□□□ 0
LDLR-203ENST00000535915 CSRNP2Q9H175 543 aa15.06■□□□□ 0
LDLR-203ENST00000535915 V9GY48 417 aaPredicted RBP15.06■□□□□ 0
LDLR-203ENST00000535915 FAM205CA6NFA0 338 aa15.06■□□□□ 0
LDLR-203ENST00000535915 USP17L12C9JPN9 530 aa15.06■□□□□ 0
LDLR-203ENST00000535915 USP17L21D6R901 530 aa15.06■□□□□ 0
LDLR-203ENST00000535915 MYO1BO43795 1136 aa15.06■□□□□ 0
LDLR-203ENST00000535915 KRT2P35908 639 aa15.06■□□□□ 0
LDLR-203ENST00000535915 NAA30Q147X3 362 aaPredicted RBP15.06■□□□□ 0
LDLR-203ENST00000535915 PKN1Q16512 942 aa15.06■□□□□ 0
LDLR-203ENST00000535915 HSP90AA4PQ58FG1 418 aa15.06■□□□□ 0
LDLR-203ENST00000535915 CTR9Q6PD62 1173 aa15.06■□□□□ 0
LDLR-203ENST00000535915 SMIM5Q71RC9 77 aa15.06■□□□□ 0
LDLR-203ENST00000535915 GRAMD1CQ8IYS0 662 aa15.06■□□□□ 0
LDLR-203ENST00000535915 SHISA4Q96DD7 197 aa15.06■□□□□ 0
LDLR-203ENST00000535915 LAMB1P07942 1786 aa15.06■□□□□ 0
LDLR-203ENST00000535915 ZNF831Q5JPB2 1677 aa15.05■□□□□ 0
LDLR-203ENST00000535915 PSDA5PKW4 1024 aaPredicted RBP15.05■□□□□ 0
LDLR-203ENST00000535915 TRIM75PA6NK02 468 aa15.05■□□□□ 0
LDLR-203ENST00000535915 KLRK1P26718 216 aa15.05■□□□□ 0
LDLR-203ENST00000535915 USP49Q70CQ1 688 aa15.05■□□□□ 0
LDLR-203ENST00000535915 PHF20Q9BVI0 1012 aa15.05■□□□□ 0
LDLR-203ENST00000535915 RBM28Q9NW13 759 aaKnown RBP15.05■□□□□ 0
LDLR-203ENST00000535915 PRPF3O43395 683 aaKnown RBP15.05■□□□□ -0
LDLR-203ENST00000535915 PCP11498 1178 aaKnown RBP15.05■□□□□ -0
LDLR-203ENST00000535915 KCNJ6P48051 423 aa15.05■□□□□ -0
LDLR-203ENST00000535915 KANK3Q6NY19 840 aa15.05■□□□□ -0
LDLR-203ENST00000535915 NSUN4Q96CB9 384 aaKnown RBP15.05■□□□□ -0
LDLR-203ENST00000535915 DACH1Q9UI36 760 aa15.05■□□□□ -0
LDLR-203ENST00000535915 TMEM232C9JQI7 657 aa15.04■□□□□ -0
LDLR-203ENST00000535915 CALM1P0DP23 149 aa15.04■□□□□ -0
LDLR-203ENST00000535915 CALM2P0DP24 149 aa15.04■□□□□ -0
LDLR-203ENST00000535915 CALM3P0DP25 149 aa15.04■□□□□ -0
LDLR-203ENST00000535915 TOP1P11387 765 aaKnown RBP15.04■□□□□ -0
LDLR-203ENST00000535915 MECOMQ03112 1051 aa15.04■□□□□ -0
LDLR-203ENST00000535915 PDE4CQ08493 712 aa15.04■□□□□ -0
LDLR-203ENST00000535915 FUT2Q10981 343 aa15.04■□□□□ -0
LDLR-203ENST00000535915 PTPN21Q16825 1174 aa15.04■□□□□ -0
LDLR-203ENST00000535915 ZNF827Q17R98 1081 aa15.04■□□□□ -0
LDLR-203ENST00000535915 NT5DC1Q5TFE4 455 aa15.04■□□□□ -0
LDLR-203ENST00000535915 FBXO33Q7Z6M2 555 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms