RNA–Protein interactions for RNA: ENST00000534538.1

RECQL4-207, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-207ENST00000534538 TAOK2Q9UL54 1235 aa21.6■■□□□ 1.05
RECQL4-207ENST00000534538 USP17L10C9JJH3 530 aa21.59■■□□□ 1.05
RECQL4-207ENST00000534538 HMGCRP04035 888 aa21.59■■□□□ 1.05
RECQL4-207ENST00000534538 IRX3P78415 501 aaPredicted RBP21.59■■□□□ 1.05
RECQL4-207ENST00000534538 TMED8Q6PL24 325 aaPredicted RBP21.59■■□□□ 1.05
RECQL4-207ENST00000534538 ITPRIPQ8IWB1 547 aa21.59■■□□□ 1.05
RECQL4-207ENST00000534538 MIER1Q8N108 512 aa21.59■■□□□ 1.05
RECQL4-207ENST00000534538 EAF2Q96CJ1 260 aaPredicted RBP21.59■■□□□ 1.05
RECQL4-207ENST00000534538 P2RX7Q99572 595 aaKnown RBP21.59■■□□□ 1.05
RECQL4-207ENST00000534538 PRO3102Q9H379 93 aa21.59■■□□□ 1.05
RECQL4-207ENST00000534538 RBM27Q9P2N5 1060 aaKnown RBP21.59■■□□□ 1.05
RECQL4-207ENST00000534538 MAST2Q6P0Q8 1798 aa21.59■■□□□ 1.05
RECQL4-207ENST00000534538 SIPA1L1O43166 1804 aa21.58■■□□□ 1.05
RECQL4-207ENST00000534538 HLA-DOAP06340 250 aa21.58■■□□□ 1.05
RECQL4-207ENST00000534538 RLBP1P12271 317 aa21.58■■□□□ 1.05
RECQL4-207ENST00000534538 CYP7A1P22680 504 aa21.58■■□□□ 1.05
RECQL4-207ENST00000534538 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.58■■□□□ 1.05
RECQL4-207ENST00000534538 CCDC8Q9H0W5 538 aaPredicted RBP21.58■■□□□ 1.05
RECQL4-207ENST00000534538 TLR7Q9NYK1 1049 aaKnown RBP21.58■■□□□ 1.05
RECQL4-207ENST00000534538 DYNLL1P63167 89 aaKnown RBP21.57■■□□□ 1.04
RECQL4-207ENST00000534538 GPRC5AQ8NFJ5 357 aa21.57■■□□□ 1.04
RECQL4-207ENST00000534538 ZBTB21Q9ULJ3 1066 aa21.57■■□□□ 1.04
RECQL4-207ENST00000534538 RPTORQ8N122 1335 aa21.56■■□□□ 1.04
RECQL4-207ENST00000534538 EVI5O60447 810 aa21.56■■□□□ 1.04
RECQL4-207ENST00000534538 HERVK_113P62684 666 aa21.56■■□□□ 1.04
RECQL4-207ENST00000534538 ANKLE1Q8NAG6 615 aa21.56■■□□□ 1.04
RECQL4-207ENST00000534538 SAP30BPQ9UHR5 308 aaKnown RBP21.56■■□□□ 1.04
RECQL4-207ENST00000534538 FOCADQ5VW36 1801 aa21.55■■□□□ 1.04
RECQL4-207ENST00000534538 IDH1O75874 414 aaKnown RBP21.55■■□□□ 1.04
RECQL4-207ENST00000534538 GDF11O95390 407 aa21.55■■□□□ 1.04
RECQL4-207ENST00000534538 HNRNPUQ00839 825 aaKnown RBP eCLIP21.55■■□□□ 1.04
RECQL4-207ENST00000534538 CEP85Q6P2H3 762 aa21.55■■□□□ 1.04
RECQL4-207ENST00000534538 PAWRQ96IZ0 340 aaKnown RBP21.55■■□□□ 1.04
RECQL4-207ENST00000534538 HMX1Q9NP08 348 aaPredicted RBP21.55■■□□□ 1.04
RECQL4-207ENST00000534538 CDK5RAP2Q96SN8 1893 aa21.55■■□□□ 1.04
RECQL4-207ENST00000534538 MYO5AQ9Y4I1 1855 aaKnown RBP21.54■■□□□ 1.04
RECQL4-207ENST00000534538 XRCC5P13010 732 aaKnown RBP21.54■■□□□ 1.04
RECQL4-207ENST00000534538 SHROOM1Q2M3G4 852 aaPredicted RBP21.54■■□□□ 1.04
RECQL4-207ENST00000534538 TATDN1Q6P1N9 297 aa21.54■■□□□ 1.04
RECQL4-207ENST00000534538 USP17L2Q6R6M4 530 aa21.54■■□□□ 1.04
RECQL4-207ENST00000534538 NECAB2Q7Z6G3 386 aa21.54■■□□□ 1.04
RECQL4-207ENST00000534538 ERC1Q8IUD2 1116 aa21.54■■□□□ 1.04
RECQL4-207ENST00000534538 GTF3C2Q8WUA4 911 aaPredicted RBP21.54■■□□□ 1.04
RECQL4-207ENST00000534538 EHD4Q9H223 541 aa21.54■■□□□ 1.04
RECQL4-207ENST00000534538 TXNRD2Q9NNW7 524 aa21.54■■□□□ 1.04
RECQL4-207ENST00000534538 EMILIN3Q9NT22 766 aa21.54■■□□□ 1.04
RECQL4-207ENST00000534538 RBPJLQ9UBG7 517 aa21.54■■□□□ 1.04
RECQL4-207ENST00000534538 MAPK4P31152 587 aa21.53■■□□□ 1.04
RECQL4-207ENST00000534538 USP5P45974 858 aa21.53■■□□□ 1.04
RECQL4-207ENST00000534538 MAP3K12Q12852 859 aa21.53■■□□□ 1.04
RECQL4-207ENST00000534538 MAGEB6Q8N7X4 407 aa21.53■■□□□ 1.04
RECQL4-207ENST00000534538 MIGA1Q8NAN2 632 aa21.53■■□□□ 1.04
RECQL4-207ENST00000534538 NUDT12Q9BQG2 462 aa21.53■■□□□ 1.04
RECQL4-207ENST00000534538 SZT2Q5T011 3432 aa21.52■■□□□ 1.04
RECQL4-207ENST00000534538 GH2P01242 217 aa21.52■■□□□ 1.04
RECQL4-207ENST00000534538 MAP3K21Q5TCX8 1036 aa21.52■■□□□ 1.04
RECQL4-207ENST00000534538 TRMT44Q8IYL2 757 aaKnown RBP21.52■■□□□ 1.04
RECQL4-207ENST00000534538 SOCS4Q8WXH5 440 aa21.52■■□□□ 1.04
RECQL4-207ENST00000534538 SERPINB13Q9UIV8 391 aa21.52■■□□□ 1.04
RECQL4-207ENST00000534538 A0A1W2PPC1 479 aa21.51■■□□□ 1.03
RECQL4-207ENST00000534538 CYP2B6P20813 491 aa21.51■■□□□ 1.03
RECQL4-207ENST00000534538 ERVK-9P63128 1117 aa21.51■■□□□ 1.03
RECQL4-207ENST00000534538 ERVK-24P63145 666 aa21.51■■□□□ 1.03
RECQL4-207ENST00000534538 TRIM32Q13049 653 aa21.51■■□□□ 1.03
RECQL4-207ENST00000534538 Q3C1V9 767 aa21.51■■□□□ 1.03
RECQL4-207ENST00000534538 HSP90AB4PQ58FF6 505 aa21.51■■□□□ 1.03
RECQL4-207ENST00000534538 TTC6Q86TZ1 520 aa21.51■■□□□ 1.03
RECQL4-207ENST00000534538 TRIB2Q92519 343 aa21.51■■□□□ 1.03
RECQL4-207ENST00000534538 USP6NLQ92738 828 aa21.51■■□□□ 1.03
RECQL4-207ENST00000534538 C12orf42Q96LP6 360 aa21.51■■□□□ 1.03
RECQL4-207ENST00000534538 ANTXR1Q9H6X2 564 aa21.51■■□□□ 1.03
RECQL4-207ENST00000534538 PEX10O60683 326 aa21.5■■□□□ 1.03
RECQL4-207ENST00000534538 PDE3AQ14432 1141 aa21.5■■□□□ 1.03
RECQL4-207ENST00000534538 POTEEQ6S8J3 1075 aa21.5■■□□□ 1.03
RECQL4-207ENST00000534538 AACSQ86V21 672 aa21.5■■□□□ 1.03
RECQL4-207ENST00000534538 DIS3LQ8TF46 1054 aaKnown RBP21.5■■□□□ 1.03
RECQL4-207ENST00000534538 OGDHLQ9ULD0 1010 aa21.5■■□□□ 1.03
RECQL4-207ENST00000534538 EXOC6BQ9Y2D4 811 aa21.5■■□□□ 1.03
RECQL4-207ENST00000534538 NDUFB9Q9Y6M9 179 aa21.5■■□□□ 1.03
RECQL4-207ENST00000534538 PLXNB2O15031 1838 aa21.5■■□□□ 1.03
RECQL4-207ENST00000534538 MNX1P50219 401 aaPredicted RBP21.49■■□□□ 1.03
RECQL4-207ENST00000534538 CCAR1Q8IX12 1150 aaKnown RBP21.49■■□□□ 1.03
RECQL4-207ENST00000534538 NBPF3Q9H094 633 aa21.49■■□□□ 1.03
RECQL4-207ENST00000534538 RABGAP1Q9Y3P9 1069 aa21.49■■□□□ 1.03
RECQL4-207ENST00000534538 USP17L15C9J2P7 530 aa21.48■■□□□ 1.03
RECQL4-207ENST00000534538 USP17L13C9JLJ4 530 aa21.48■■□□□ 1.03
RECQL4-207ENST00000534538 USP17L11C9JVI0 530 aa21.48■■□□□ 1.03
RECQL4-207ENST00000534538 USP17L18D6R9N7 530 aa21.48■■□□□ 1.03
RECQL4-207ENST00000534538 USP17L22D6RA61 530 aa21.48■■□□□ 1.03
RECQL4-207ENST00000534538 USP17L17D6RBQ6 530 aa21.48■■□□□ 1.03
RECQL4-207ENST00000534538 USP17L19D6RCP7 530 aa21.48■■□□□ 1.03
RECQL4-207ENST00000534538 USP17L20D6RJB6 530 aa21.48■■□□□ 1.03
RECQL4-207ENST00000534538 PRKAR2AP13861 404 aaKnown RBP21.48■■□□□ 1.03
RECQL4-207ENST00000534538 USP14P54578 494 aa21.48■■□□□ 1.03
RECQL4-207ENST00000534538 USP17L24Q0WX57 530 aa21.48■■□□□ 1.03
RECQL4-207ENST00000534538 TTF1Q15361 905 aaPredicted RBP21.48■■□□□ 1.03
RECQL4-207ENST00000534538 CERKLQ49MI3 558 aaPredicted RBP21.48■■□□□ 1.03
RECQL4-207ENST00000534538 MORN1Q5T089 497 aa21.48■■□□□ 1.03
RECQL4-207ENST00000534538 GPR142Q7Z601 462 aa21.48■■□□□ 1.03
RECQL4-207ENST00000534538 PLEKHH3Q7Z736 793 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms