RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 CCDC113Q9H0I3 377 aa19.35■□□□□ 0.69
PHRF1-206ENST00000534320 ALDH1B1P30837 517 aa19.35■□□□□ 0.69
PHRF1-206ENST00000534320 TXKP42681 527 aa19.35■□□□□ 0.69
PHRF1-206ENST00000534320 GTF2IP78347 998 aa19.35■□□□□ 0.69
PHRF1-206ENST00000534320 PDE4DQ08499 809 aa19.35■□□□□ 0.69
PHRF1-206ENST00000534320 NBPF14Q5TI25 921 aa19.35■□□□□ 0.69
PHRF1-206ENST00000534320 ADD2P35612 726 aa19.35■□□□□ 0.69
PHRF1-206ENST00000534320 KARSQ15046 597 aaKnown RBP19.35■□□□□ 0.69
PHRF1-206ENST00000534320 SMAP1Q8IYB5 467 aaPredicted RBP19.35■□□□□ 0.69
PHRF1-206ENST00000534320 GLT8D2Q9H1C3 349 aa19.35■□□□□ 0.69
PHRF1-206ENST00000534320 NRKQ7Z2Y5 1582 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 AGLP35573 1532 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 CTAGE9A4FU28 777 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 KRT86O43790 486 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 PI16Q6UXB8 463 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 SYT10Q6XYQ8 523 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 NEK11Q8NG66 645 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 MPHOSPH6Q99547 160 aaKnown RBP19.34■□□□□ 0.69
PHRF1-206ENST00000534320 NECTIN1Q15223 517 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 LZTFL1Q9NQ48 299 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 PFKFB1P16118 471 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 ATP2B4P23634 1241 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 ADCY7P51828 1080 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 KIF5AQ12840 1032 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 PRPF4BQ13523 1007 aaKnown RBP19.34■□□□□ 0.69
PHRF1-206ENST00000534320 CCDC65Q8IXS2 484 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 ZNF804BA4D1E1 1349 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 SYNRGQ9UMZ2 1314 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 TACC1O75410 805 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 HLTFQ14527 1009 aaKnown RBP eCLIP19.34■□□□□ 0.69
PHRF1-206ENST00000534320 USP37Q86T82 979 aa19.34■□□□□ 0.69
PHRF1-206ENST00000534320 ZC3H13Q5T200 1668 aaKnown RBP19.34■□□□□ 0.69
PHRF1-206ENST00000534320 FBXO18Q8NFZ0 1043 aa19.33■□□□□ 0.69
PHRF1-206ENST00000534320 OSBP2Q969R2 916 aa19.33■□□□□ 0.69
PHRF1-206ENST00000534320 HS2ST1Q7LGA3 356 aa19.33■□□□□ 0.69
PHRF1-206ENST00000534320 ATP10DQ9P241 1426 aa19.33■□□□□ 0.68
PHRF1-206ENST00000534320 WDHD1O75717 1129 aaPredicted RBP19.33■□□□□ 0.68
PHRF1-206ENST00000534320 STAMBPO95630 424 aa19.33■□□□□ 0.68
PHRF1-206ENST00000534320 SLC1A4P43007 532 aa19.33■□□□□ 0.68
PHRF1-206ENST00000534320 IGSF22Q8N9C0 903 aa19.33■□□□□ 0.68
PHRF1-206ENST00000534320 DRC1Q96MC2 740 aa19.33■□□□□ 0.68
PHRF1-206ENST00000534320 CRB1P82279 1406 aa19.33■□□□□ 0.68
PHRF1-206ENST00000534320 TNS3Q68CZ2 1445 aa19.33■□□□□ 0.68
PHRF1-206ENST00000534320 TTC31Q49AM3 519 aaPredicted RBP19.33■□□□□ 0.68
PHRF1-206ENST00000534320 ARHGEF10LQ9HCE6 1279 aa19.33■□□□□ 0.68
PHRF1-206ENST00000534320 MAPK8IP1Q9UQF2 711 aa19.33■□□□□ 0.68
PHRF1-206ENST00000534320 NFE2L3Q9Y4A8 694 aa19.33■□□□□ 0.68
PHRF1-206ENST00000534320 SETD1BQ9UPS6 1966 aaKnown RBP19.32■□□□□ 0.68
PHRF1-206ENST00000534320 KIAA1468Q9P260 1216 aa19.32■□□□□ 0.68
PHRF1-206ENST00000534320 APBA3O96018 575 aa19.32■□□□□ 0.68
PHRF1-206ENST00000534320 CNNM4Q6P4Q7 775 aa19.32■□□□□ 0.68
PHRF1-206ENST00000534320 PPM1EQ8WY54 764 aa19.32■□□□□ 0.68
PHRF1-206ENST00000534320 ARID5AQ03989 594 aa19.32■□□□□ 0.68
PHRF1-206ENST00000534320 GAS2L3Q86XJ1 694 aa19.32■□□□□ 0.68
PHRF1-206ENST00000534320 NSUN7Q8NE18 718 aaKnown RBP19.32■□□□□ 0.68
PHRF1-206ENST00000534320 TTLL11Q8NHH1 800 aa19.32■□□□□ 0.68
PHRF1-206ENST00000534320 VPS16Q9H269 839 aa19.32■□□□□ 0.68
PHRF1-206ENST00000534320 PUS7LQ9H0K6 701 aaKnown RBP19.32■□□□□ 0.68
PHRF1-206ENST00000534320 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.32■□□□□ 0.68
PHRF1-206ENST00000534320 RSPH14Q9UHP6 348 aa19.32■□□□□ 0.68
PHRF1-206ENST00000534320 V9GYY5 206 aaPredicted RBP19.32■□□□□ 0.68
PHRF1-206ENST00000534320 OVOS2A0A0J9YW53 1432 aa19.32■□□□□ 0.68
PHRF1-206ENST00000534320 OVOS2Q6IE36 1432 aa19.32■□□□□ 0.68
PHRF1-206ENST00000534320 SEMA3EO15041 775 aa19.31■□□□□ 0.68
PHRF1-206ENST00000534320 TCP10Q12799 353 aa19.31■□□□□ 0.68
PHRF1-206ENST00000534320 PAK1Q13153 545 aa19.31■□□□□ 0.68
PHRF1-206ENST00000534320 ERFEQ4G0M1 354 aa19.31■□□□□ 0.68
PHRF1-206ENST00000534320 DNAI2Q9GZS0 605 aa19.31■□□□□ 0.68
PHRF1-206ENST00000534320 PCDHA7Q9UN72 937 aa19.31■□□□□ 0.68
PHRF1-206ENST00000534320 CPS1P31327 1500 aa19.31■□□□□ 0.68
PHRF1-206ENST00000534320 CEP112Q8N8E3 955 aa19.31■□□□□ 0.68
PHRF1-206ENST00000534320 RNF216Q9NWF9 866 aaPredicted RBP19.31■□□□□ 0.68
PHRF1-206ENST00000534320 IMPACTQ9P2X3 320 aa19.31■□□□□ 0.68
PHRF1-206ENST00000534320 LRWD1Q9UFC0 647 aa19.31■□□□□ 0.68
PHRF1-206ENST00000534320 GUCA1BQ9UMX6 200 aa19.31■□□□□ 0.68
PHRF1-206ENST00000534320 TTF2Q9UNY4 1162 aaKnown RBP19.31■□□□□ 0.68
PHRF1-206ENST00000534320 PNOCQ13519 176 aa19.31■□□□□ 0.68
PHRF1-206ENST00000534320 FCHSD1Q86WN1 690 aa19.31■□□□□ 0.68
PHRF1-206ENST00000534320 USP40Q9NVE5 1235 aa19.31■□□□□ 0.68
PHRF1-206ENST00000534320 SERTAD1Q9UHV2 236 aa19.31■□□□□ 0.68
PHRF1-206ENST00000534320 MACROD2A1Z1Q3 448 aa19.31■□□□□ 0.68
PHRF1-206ENST00000534320 PCP11498 1178 aaKnown RBP19.31■□□□□ 0.68
PHRF1-206ENST00000534320 CTNNBL1Q8WYA6 563 aaPredicted RBP19.31■□□□□ 0.68
PHRF1-206ENST00000534320 PTPRUQ92729 1446 aa19.3■□□□□ 0.68
PHRF1-206ENST00000534320 CMA1P23946 247 aa19.3■□□□□ 0.68
PHRF1-206ENST00000534320 BTBD18B2RXH4 712 aa19.3■□□□□ 0.68
PHRF1-206ENST00000534320 TRAF5O00463 557 aa19.3■□□□□ 0.68
PHRF1-206ENST00000534320 ZNF569Q5MCW4 686 aa19.3■□□□□ 0.68
PHRF1-206ENST00000534320 APOA5Q6Q788 366 aa19.3■□□□□ 0.68
PHRF1-206ENST00000534320 PNMA1Q8ND90 353 aa19.3■□□□□ 0.68
PHRF1-206ENST00000534320 NOC4LQ9BVI4 516 aaKnown RBP19.3■□□□□ 0.68
PHRF1-206ENST00000534320 C6orf163Q5TEZ5 329 aa19.3■□□□□ 0.68
PHRF1-206ENST00000534320 GOPCQ9HD26 462 aa19.3■□□□□ 0.68
PHRF1-206ENST00000534320 PDE6BP35913 854 aa19.3■□□□□ 0.68
PHRF1-206ENST00000534320 TBC1D8BQ0IIM8 1120 aa19.3■□□□□ 0.68
PHRF1-206ENST00000534320 LARGE1O95461 756 aa19.29■□□□□ 0.68
PHRF1-206ENST00000534320 PLS1Q14651 629 aa19.29■□□□□ 0.68
PHRF1-206ENST00000534320 HAUS3Q68CZ6 603 aa19.29■□□□□ 0.68
PHRF1-206ENST00000534320 REXO1Q8N1G1 1221 aaKnown RBP19.29■□□□□ 0.68
PHRF1-206ENST00000534320 SUPT20HQ8NEM7 779 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms