RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 U3KQE9 123 aa6.77□□□□□ -1.33
ATPAF1-211ENST00000534216 ROBO2Q9HCK4 1378 aa6.77□□□□□ -1.33
ATPAF1-211ENST00000534216 PRR36Q9H6K5 1346 aa6.76□□□□□ -1.33
ATPAF1-211ENST00000534216 SCAMP3O14828 347 aaKnown RBP6.76□□□□□ -1.33
ATPAF1-211ENST00000534216 TLR3O15455 904 aaKnown RBP6.76□□□□□ -1.33
ATPAF1-211ENST00000534216 ADAMTS4O75173 837 aa6.76□□□□□ -1.33
ATPAF1-211ENST00000534216 SLITRK5O94991 958 aa6.76□□□□□ -1.33
ATPAF1-211ENST00000534216 EOMESO95936 686 aa6.76□□□□□ -1.33
ATPAF1-211ENST00000534216 PLCG1P19174 1290 aa6.76□□□□□ -1.33
ATPAF1-211ENST00000534216 PRAMEF13Q5VWM6 474 aa6.76□□□□□ -1.33
ATPAF1-211ENST00000534216 SLC6A19Q695T7 634 aa6.76□□□□□ -1.33
ATPAF1-211ENST00000534216 REC114Q7Z4M0 266 aa6.76□□□□□ -1.33
ATPAF1-211ENST00000534216 MCATQ8IVS2 390 aaKnown RBP6.76□□□□□ -1.33
ATPAF1-211ENST00000534216 MFSD2AQ8NA29 543 aa6.76□□□□□ -1.33
ATPAF1-211ENST00000534216 RNF34Q969K3 372 aa6.76□□□□□ -1.33
ATPAF1-211ENST00000534216 ACSF2Q96CM8 615 aaPredicted RBP6.76□□□□□ -1.33
ATPAF1-211ENST00000534216 TMEM87BQ96K49 555 aa6.76□□□□□ -1.33
ATPAF1-211ENST00000534216 HEXIM2Q96MH2 286 aaKnown RBP6.76□□□□□ -1.33
ATPAF1-211ENST00000534216 LRRC3Q9BY71 257 aa6.76□□□□□ -1.33
ATPAF1-211ENST00000534216 IGF2BP3O00425 579 aaKnown RBP eCLIP6.75□□□□□ -1.33
ATPAF1-211ENST00000534216 PRNPP04156 253 aa6.75□□□□□ -1.33
ATPAF1-211ENST00000534216 CRKP46108 304 aa6.75□□□□□ -1.33
ATPAF1-211ENST00000534216 OXCT1P55809 520 aa6.75□□□□□ -1.33
ATPAF1-211ENST00000534216 TMEM201Q5SNT2 666 aa6.75□□□□□ -1.33
ATPAF1-211ENST00000534216 NBPF11Q86T75 865 aa6.75□□□□□ -1.33
ATPAF1-211ENST00000534216 MIPEPQ99797 713 aa6.75□□□□□ -1.33
ATPAF1-211ENST00000534216 DPH2Q9BQC3 489 aaPredicted RBP6.75□□□□□ -1.33
ATPAF1-211ENST00000534216 MKNK2Q9HBH9 465 aa6.75□□□□□ -1.33
ATPAF1-211ENST00000534216 BSDC1Q9NW68 430 aaPredicted RBP6.75□□□□□ -1.33
ATPAF1-211ENST00000534216 GTF2IRD1Q9UHL9 959 aa6.75□□□□□ -1.33
ATPAF1-211ENST00000534216 GRIN3BO60391 1043 aa6.74□□□□□ -1.33
ATPAF1-211ENST00000534216 CWF19L2Q2TBE0 894 aaKnown RBP6.74□□□□□ -1.33
ATPAF1-211ENST00000534216 LETMD1Q6P1Q0 360 aa6.74□□□□□ -1.33
ATPAF1-211ENST00000534216 USP48Q86UV5 1035 aa6.74□□□□□ -1.33
ATPAF1-211ENST00000534216 PLD6Q8N2A8 252 aaKnown RBP6.74□□□□□ -1.33
ATPAF1-211ENST00000534216 RIN3Q8TB24 985 aa6.74□□□□□ -1.33
ATPAF1-211ENST00000534216 NETO1Q8TDF5 533 aa6.74□□□□□ -1.33
ATPAF1-211ENST00000534216 XAGE3Q8WTP9 111 aa6.74□□□□□ -1.33
ATPAF1-211ENST00000534216 UBP1Q9NZI7 540 aa6.74□□□□□ -1.33
ATPAF1-211ENST00000534216 REV1Q9UBZ9 1251 aa6.74□□□□□ -1.33
ATPAF1-211ENST00000534216 CCDC39Q9UFE4 941 aa6.74□□□□□ -1.33
ATPAF1-211ENST00000534216 HTR3BO95264 441 aa6.73□□□□□ -1.33
ATPAF1-211ENST00000534216 WNT11O96014 354 aa6.73□□□□□ -1.33
ATPAF1-211ENST00000534216 ZNF394Q53GI3 561 aa6.73□□□□□ -1.33
ATPAF1-211ENST00000534216 ARHGAP27Q6ZUM4 889 aa6.73□□□□□ -1.33
ATPAF1-211ENST00000534216 VSIG10LQ86VR7 867 aa6.73□□□□□ -1.33
ATPAF1-211ENST00000534216 SPON2Q9BUD6 331 aa6.73□□□□□ -1.33
ATPAF1-211ENST00000534216 BRMS1Q9HCU9 246 aa6.73□□□□□ -1.33
ATPAF1-211ENST00000534216 PRDM5Q9NQX1 630 aaPredicted RBP6.73□□□□□ -1.33
ATPAF1-211ENST00000534216 MAPK8IP1Q9UQF2 711 aa6.73□□□□□ -1.33
ATPAF1-211ENST00000534216 PCDHGB7Q9Y5F8 929 aa6.73□□□□□ -1.33
ATPAF1-211ENST00000534216 UPK3BL1B0FP48 263 aa6.72□□□□□ -1.33
ATPAF1-211ENST00000534216 UPK3BL2E5RIL1 263 aa6.72□□□□□ -1.33
ATPAF1-211ENST00000534216 CEACAM5P06731 702 aa6.72□□□□□ -1.33
ATPAF1-211ENST00000534216 APOBRQ0VD83 1088 aa6.72□□□□□ -1.33
ATPAF1-211ENST00000534216 NFXL1Q6ZNB6 911 aa6.72□□□□□ -1.33
ATPAF1-211ENST00000534216 METTL16Q86W50 562 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-211ENST00000534216 KIAA0825Q8IV33 1275 aa6.72□□□□□ -1.33
ATPAF1-211ENST00000534216 EAF1Q96JC9 268 aaPredicted RBP6.72□□□□□ -1.33
ATPAF1-211ENST00000534216 NT5C1AQ9BXI3 368 aa6.72□□□□□ -1.33
ATPAF1-211ENST00000534216 PODXL2Q9NZ53 605 aa6.72□□□□□ -1.33
ATPAF1-211ENST00000534216 DDX41Q9UJV9 622 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-211ENST00000534216 TPX2Q9ULW0 747 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-211ENST00000534216 ANGEL1Q9UNK9 670 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-211ENST00000534216 PLAGL2Q9UPG8 496 aa6.72□□□□□ -1.33
ATPAF1-211ENST00000534216 CNTNAP4Q9C0A0 1308 aa6.72□□□□□ -1.33
ATPAF1-211ENST00000534216 ITIH2P19823 946 aa6.71□□□□□ -1.34
ATPAF1-211ENST00000534216 YARSP54577 528 aaKnown RBP6.71□□□□□ -1.34
ATPAF1-211ENST00000534216 RACK1P63244 317 aaKnown RBP6.71□□□□□ -1.34
ATPAF1-211ENST00000534216 IFI16Q16666 785 aaKnown RBP6.71□□□□□ -1.34
ATPAF1-211ENST00000534216 SEZ6Q53EL9 994 aa6.71□□□□□ -1.34
ATPAF1-211ENST00000534216 ZNF746Q6NUN9 644 aaPredicted RBP6.71□□□□□ -1.34
ATPAF1-211ENST00000534216 SLFN12Q8IYM2 578 aa6.71□□□□□ -1.34
ATPAF1-211ENST00000534216 FAM13CQ8NE31 585 aa6.71□□□□□ -1.34
ATPAF1-211ENST00000534216 TNKS2Q9H2K2 1166 aa6.71□□□□□ -1.34
ATPAF1-211ENST00000534216 GNAT3A8MTJ3 354 aa6.7□□□□□ -1.34
ATPAF1-211ENST00000534216 DNAJA2O60884 412 aa6.7□□□□□ -1.34
ATPAF1-211ENST00000534216 ATE1O95260 518 aa6.7□□□□□ -1.34
ATPAF1-211ENST00000534216 GP2P55259 537 aaKnown RBP6.7□□□□□ -1.34
ATPAF1-211ENST00000534216 HDLBPQ00341 1268 aaKnown RBP6.7□□□□□ -1.34
ATPAF1-211ENST00000534216 NKPD1Q17RQ9 610 aa6.7□□□□□ -1.34
ATPAF1-211ENST00000534216 SFRP5Q5T4F7 317 aa6.7□□□□□ -1.34
ATPAF1-211ENST00000534216 C22orf34Q6ZV56 151 aa6.7□□□□□ -1.34
ATPAF1-211ENST00000534216 CDH24Q86UP0 819 aa6.7□□□□□ -1.34
ATPAF1-211ENST00000534216 SLITRK4Q8IW52 837 aa6.7□□□□□ -1.34
ATPAF1-211ENST00000534216 SPACA3Q8IXA5 215 aa6.7□□□□□ -1.34
ATPAF1-211ENST00000534216 DNAJB8Q8NHS0 232 aa6.7□□□□□ -1.34
ATPAF1-211ENST00000534216 CYB5D2Q8WUJ1 264 aa6.7□□□□□ -1.34
ATPAF1-211ENST00000534216 BCL7CQ8WUZ0 217 aaPredicted RBP6.7□□□□□ -1.34
ATPAF1-211ENST00000534216 MISP3Q96FF7 219 aa6.7□□□□□ -1.34
ATPAF1-211ENST00000534216 EHMT1Q9H9B1 1298 aa6.7□□□□□ -1.34
ATPAF1-211ENST00000534216 PCDHB14Q9Y5E9 798 aa6.7□□□□□ -1.34
ATPAF1-211ENST00000534216 TMEM265A0A087WTH1 108 aa6.69□□□□□ -1.34
ATPAF1-211ENST00000534216 PRR33A8MZF0 331 aa6.69□□□□□ -1.34
ATPAF1-211ENST00000534216 CHURC1-FNTBB4DL54 471 aa6.69□□□□□ -1.34
ATPAF1-211ENST00000534216 STK11IPQ8N1F8 1099 aa6.69□□□□□ -1.34
ATPAF1-211ENST00000534216 REXO1Q8N1G1 1221 aaKnown RBP6.69□□□□□ -1.34
ATPAF1-211ENST00000534216 PPP1R13LQ8WUF5 828 aa6.69□□□□□ -1.34
ATPAF1-211ENST00000534216 NKD1Q969G9 470 aa6.69□□□□□ -1.34
ATPAF1-211ENST00000534216 ZNF428Q96B54 188 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms