RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 HOXA7P31268 230 aaPredicted RBP18.38■□□□□ 0.53
CTSB-230ENST00000534149 GPR153Q6NV75 609 aa18.38■□□□□ 0.53
CTSB-230ENST00000534149 MAPKAPK5Q8IW41 473 aa18.38■□□□□ 0.53
CTSB-230ENST00000534149 TDHQ8IZJ6 230 aa18.38■□□□□ 0.53
CTSB-230ENST00000534149 GPRC5AQ8NFJ5 357 aa18.38■□□□□ 0.53
CTSB-230ENST00000534149 TGFBRAP1Q8WUH2 860 aa18.38■□□□□ 0.53
CTSB-230ENST00000534149 SOCS4Q8WXH5 440 aa18.38■□□□□ 0.53
CTSB-230ENST00000534149 DHX36Q9H2U1 1008 aaKnown RBP18.38■□□□□ 0.53
CTSB-230ENST00000534149 SNRKQ9NRH2 765 aa18.38■□□□□ 0.53
CTSB-230ENST00000534149 MYO5AQ9Y4I1 1855 aaKnown RBP18.37■□□□□ 0.53
CTSB-230ENST00000534149 UQCRFS1P1P0C7P4 283 aa18.37■□□□□ 0.53
CTSB-230ENST00000534149 ZKSCAN1P17029 563 aaPredicted RBP18.37■□□□□ 0.53
CTSB-230ENST00000534149 RARSP54136 660 aaKnown RBP18.37■□□□□ 0.53
CTSB-230ENST00000534149 LRIT3Q3SXY7 679 aa18.37■□□□□ 0.53
CTSB-230ENST00000534149 NAA16Q6N069 864 aaPredicted RBP18.37■□□□□ 0.53
CTSB-230ENST00000534149 FLT1P17948 1338 aa18.37■□□□□ 0.53
CTSB-230ENST00000534149 PNMA6EA0A0J9YXQ4 647 aa18.36■□□□□ 0.53
CTSB-230ENST00000534149 USP17L10C9JJH3 530 aa18.36■□□□□ 0.53
CTSB-230ENST00000534149 BAG3O95817 575 aa18.36■□□□□ 0.53
CTSB-230ENST00000534149 XRCC5P13010 732 aaKnown RBP18.36■□□□□ 0.53
CTSB-230ENST00000534149 MAPK4P31152 587 aa18.36■□□□□ 0.53
CTSB-230ENST00000534149 CACNB2Q08289 660 aaPredicted RBP18.36■□□□□ 0.53
CTSB-230ENST00000534149 G3BP1Q13283 466 aaKnown RBP eCLIP18.36■□□□□ 0.53
CTSB-230ENST00000534149 PDE3AQ14432 1141 aa18.36■□□□□ 0.53
CTSB-230ENST00000534149 CCL14Q16627 93 aa18.36■□□□□ 0.53
CTSB-230ENST00000534149 Q3C1V9 767 aa18.36■□□□□ 0.53
CTSB-230ENST00000534149 CRACR2BQ8N4Y2 399 aaPredicted RBP18.36■□□□□ 0.53
CTSB-230ENST00000534149 PAGR1Q9BTK6 254 aa18.36■□□□□ 0.53
CTSB-230ENST00000534149 TRIM34Q9BYJ4 488 aa18.36■□□□□ 0.53
CTSB-230ENST00000534149 UBE2OQ9C0C9 1292 aaKnown RBP18.36■□□□□ 0.53
CTSB-230ENST00000534149 PORCNQ9H237 461 aa18.36■□□□□ 0.53
CTSB-230ENST00000534149 RBPJLQ9UBG7 517 aa18.36■□□□□ 0.53
CTSB-230ENST00000534149 C19orf81C9J6K1 198 aa18.35■□□□□ 0.53
CTSB-230ENST00000534149 PLCG2P16885 1265 aa18.35■□□□□ 0.53
CTSB-230ENST00000534149 CCND3P30281 292 aaPredicted RBP18.35■□□□□ 0.53
CTSB-230ENST00000534149 ERVK-9P63128 1117 aa18.35■□□□□ 0.53
CTSB-230ENST00000534149 ERVK-24P63145 666 aa18.35■□□□□ 0.53
CTSB-230ENST00000534149 GPR142Q7Z601 462 aa18.35■□□□□ 0.53
CTSB-230ENST00000534149 ADGRA1Q86SQ6 560 aa18.35■□□□□ 0.53
CTSB-230ENST00000534149 CCAR1Q8IX12 1150 aaKnown RBP18.35■□□□□ 0.53
CTSB-230ENST00000534149 ARHGAP45Q92619 1136 aa18.35■□□□□ 0.53
CTSB-230ENST00000534149 USP6NLQ92738 828 aa18.35■□□□□ 0.53
CTSB-230ENST00000534149 PALD1Q9ULE6 856 aa18.35■□□□□ 0.53
CTSB-230ENST00000534149 ZBTB21Q9ULJ3 1066 aa18.35■□□□□ 0.53
CTSB-230ENST00000534149 FRMPD3Q5JV73 1810 aa18.35■□□□□ 0.53
CTSB-230ENST00000534149 GNAI2P04899 355 aa18.34■□□□□ 0.53
CTSB-230ENST00000534149 COL6A1P12109 1028 aa18.34■□□□□ 0.53
CTSB-230ENST00000534149 TTC39AQ5SRH9 613 aa18.34■□□□□ 0.53
CTSB-230ENST00000534149 POTEEQ6S8J3 1075 aa18.34■□□□□ 0.53
CTSB-230ENST00000534149 METTL16Q86W50 562 aaKnown RBP18.34■□□□□ 0.53
CTSB-230ENST00000534149 FOXP4Q8IVH2 680 aaPredicted RBP18.34■□□□□ 0.53
CTSB-230ENST00000534149 TRMT44Q8IYL2 757 aaKnown RBP18.34■□□□□ 0.53
CTSB-230ENST00000534149 SAP30BPQ9UHR5 308 aaKnown RBP18.34■□□□□ 0.53
CTSB-230ENST00000534149 TNNQ9UQP3 1299 aa18.34■□□□□ 0.53
CTSB-230ENST00000534149 RGS2P41220 211 aa18.33■□□□□ 0.52
CTSB-230ENST00000534149 PPP4CP60510 307 aa18.33■□□□□ 0.52
CTSB-230ENST00000534149 LRRC26Q2I0M4 334 aa18.33■□□□□ 0.52
CTSB-230ENST00000534149 MORN1Q5T089 497 aa18.33■□□□□ 0.52
CTSB-230ENST00000534149 LHX8Q68G74 356 aa18.33■□□□□ 0.52
CTSB-230ENST00000534149 PLEKHH3Q7Z736 793 aa18.33■□□□□ 0.52
CTSB-230ENST00000534149 APBA2Q99767 749 aa18.33■□□□□ 0.52
CTSB-230ENST00000534149 EMILIN3Q9NT22 766 aa18.33■□□□□ 0.52
CTSB-230ENST00000534149 GINM1Q9NU53 330 aa18.33■□□□□ 0.52
CTSB-230ENST00000534149 MTMR10Q9NXD2 777 aa18.33■□□□□ 0.52
CTSB-230ENST00000534149 STXBP5LQ9Y2K9 1186 aa18.33■□□□□ 0.52
CTSB-230ENST00000534149 CYP2E1P05181 493 aaPredicted RBP18.32■□□□□ 0.52
CTSB-230ENST00000534149 GTF3C2Q8WUA4 911 aaPredicted RBP18.32■□□□□ 0.52
CTSB-230ENST00000534149 DBNDD2Q9BQY9 259 aa18.32■□□□□ 0.52
CTSB-230ENST00000534149 CWC22Q9HCG8 908 aaKnown RBP18.32■□□□□ 0.52
CTSB-230ENST00000534149 DNAH12Q6ZR08 3092 aa18.32■□□□□ 0.52
CTSB-230ENST00000534149 UNC80Q8N2C7 3258 aa18.32■□□□□ 0.52
CTSB-230ENST00000534149 MYH1P12882 1939 aa18.31■□□□□ 0.52
CTSB-230ENST00000534149 HLA-DOAP06340 250 aa18.31■□□□□ 0.52
CTSB-230ENST00000534149 TRIM27P14373 513 aa18.31■□□□□ 0.52
CTSB-230ENST00000534149 DYNLL1P63167 89 aaKnown RBP18.31■□□□□ 0.52
CTSB-230ENST00000534149 MDM2Q00987 491 aaPredicted RBP18.31■□□□□ 0.52
CTSB-230ENST00000534149 ZYXQ15942 572 aaKnown RBP18.31■□□□□ 0.52
CTSB-230ENST00000534149 TNNI3KQ59H18 835 aa18.31■□□□□ 0.52
CTSB-230ENST00000534149 USP17L2Q6R6M4 530 aa18.31■□□□□ 0.52
CTSB-230ENST00000534149 FPGT-TNNI3KV9GXZ4 949 aa18.31■□□□□ 0.52
CTSB-230ENST00000534149 GH2P01242 217 aa18.3■□□□□ 0.52
CTSB-230ENST00000534149 CCDC158Q5M9N0 1113 aa18.3■□□□□ 0.52
CTSB-230ENST00000534149 PIH1D3Q9NQM4 214 aaKnown RBP18.3■□□□□ 0.52
CTSB-230ENST00000534149 NDUFB9Q9Y6M9 179 aa18.3■□□□□ 0.52
CTSB-230ENST00000534149 LAMA2P24043 3122 aaKnown RBP18.3■□□□□ 0.52
CTSB-230ENST00000534149 CNMDO75829 334 aa18.29■□□□□ 0.52
CTSB-230ENST00000534149 ZAP70P43403 619 aa18.29■□□□□ 0.52
CTSB-230ENST00000534149 MAP2K5Q13163 448 aa18.29■□□□□ 0.52
CTSB-230ENST00000534149 FRAT1Q92837 279 aaPredicted RBP18.29■□□□□ 0.52
CTSB-230ENST00000534149 CLUAP1Q96AJ1 413 aa18.29■□□□□ 0.52
CTSB-230ENST00000534149 FEZ1Q99689 392 aa18.29■□□□□ 0.52
CTSB-230ENST00000534149 GPR108Q9NPR9 543 aa18.29■□□□□ 0.52
CTSB-230ENST00000534149 FLRT1Q9NZU1 646 aa18.29■□□□□ 0.52
CTSB-230ENST00000534149 OS9Q13438 667 aaPredicted RBP18.28■□□□□ 0.52
CTSB-230ENST00000534149 WDR78Q5VTH9 848 aa18.28■□□□□ 0.52
CTSB-230ENST00000534149 ATF7IPQ6VMQ6 1270 aa18.28■□□□□ 0.52
CTSB-230ENST00000534149 EDC3Q96F86 508 aaKnown RBP18.28■□□□□ 0.52
CTSB-230ENST00000534149 RABGAP1Q9Y3P9 1069 aa18.28■□□□□ 0.52
CTSB-230ENST00000534149 USP17L15C9J2P7 530 aa18.27■□□□□ 0.52
CTSB-230ENST00000534149 USP17L13C9JLJ4 530 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms