RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 NPR1P16066 1061 aa7.51□□□□□ -1.21
CMTM1-220ENST00000534143 PDE1AP54750 535 aa7.51□□□□□ -1.21
CMTM1-220ENST00000534143 GRAPQ13588 217 aa7.51□□□□□ -1.21
CMTM1-220ENST00000534143 TNNI3KQ59H18 835 aa7.51□□□□□ -1.21
CMTM1-220ENST00000534143 WDR44Q5JSH3 913 aa7.51□□□□□ -1.21
CMTM1-220ENST00000534143 SV2AQ7L0J3 742 aa7.51□□□□□ -1.21
CMTM1-220ENST00000534143 VWA5B2Q8N398 1253 aa7.51□□□□□ -1.21
CMTM1-220ENST00000534143 ZSCAN1Q8NBB4 408 aa7.51□□□□□ -1.21
CMTM1-220ENST00000534143 GRAPLQ8TC17 118 aaPredicted RBP7.51□□□□□ -1.21
CMTM1-220ENST00000534143 RBM17Q96I25 401 aaKnown RBP7.51□□□□□ -1.21
CMTM1-220ENST00000534143 MPHOSPH8Q99549 860 aa7.51□□□□□ -1.21
CMTM1-220ENST00000534143 CNNM1Q9NRU3 951 aa7.51□□□□□ -1.21
CMTM1-220ENST00000534143 FPGT-TNNI3KV9GXZ4 949 aa7.51□□□□□ -1.21
CMTM1-220ENST00000534143 C10orf71Q711Q0 1435 aa7.51□□□□□ -1.21
CMTM1-220ENST00000534143 MROH5Q6ZUA9 1318 aa7.51□□□□□ -1.21
CMTM1-220ENST00000534143 BBOX1O75936 387 aa7.5□□□□□ -1.21
CMTM1-220ENST00000534143 PDE8BO95263 885 aa7.5□□□□□ -1.21
CMTM1-220ENST00000534143 FGFR2P21802 821 aa7.5□□□□□ -1.21
CMTM1-220ENST00000534143 TIMM10P62072 90 aa7.5□□□□□ -1.21
CMTM1-220ENST00000534143 CHRNDQ07001 517 aa7.5□□□□□ -1.21
CMTM1-220ENST00000534143 METTL24Q5JXM2 366 aa7.5□□□□□ -1.21
CMTM1-220ENST00000534143 STYK1Q6J9G0 422 aa7.5□□□□□ -1.21
CMTM1-220ENST00000534143 AACSQ86V21 672 aa7.5□□□□□ -1.21
CMTM1-220ENST00000534143 RPGRQ92834 1020 aaKnown RBP7.5□□□□□ -1.21
CMTM1-220ENST00000534143 CCDC8Q9H0W5 538 aaPredicted RBP7.5□□□□□ -1.21
CMTM1-220ENST00000534143 MINPP1Q9UNW1 487 aa7.5□□□□□ -1.21
CMTM1-220ENST00000534143 DYRK1BQ9Y463 629 aa7.5□□□□□ -1.21
CMTM1-220ENST00000534143 DLEC1Q9Y238 1755 aa7.5□□□□□ -1.21
CMTM1-220ENST00000534143 AOX1Q06278 1338 aa7.5□□□□□ -1.21
CMTM1-220ENST00000534143 KIAA1551Q9HCM1 1747 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 A0A1B0GUL7 405 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 CDC14CA4D256 554 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 POM121CA8CG34 1229 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 LZTS3O60299 673 aaPredicted RBP7.49□□□□□ -1.21
CMTM1-220ENST00000534143 IFIT2P09913 472 aaKnown RBP7.49□□□□□ -1.21
CMTM1-220ENST00000534143 MX1P20591 662 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 ALDH1B1P30837 517 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 KRT76Q01546 638 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 TAS1R3Q7RTX0 852 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 C2CD5Q86YS7 1000 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 PI4K2BQ8TCG2 481 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 MASTLQ96GX5 879 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 ZSCAN10Q96SZ4 725 aaPredicted RBP7.49□□□□□ -1.21
CMTM1-220ENST00000534143 ETNK1Q9HBU6 452 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 CUEDC1Q9NWM3 386 aaPredicted RBP7.49□□□□□ -1.21
CMTM1-220ENST00000534143 TLR7Q9NYK1 1049 aaKnown RBP7.49□□□□□ -1.21
CMTM1-220ENST00000534143 DBNLQ9UJU6 430 aaKnown RBP7.49□□□□□ -1.21
CMTM1-220ENST00000534143 AKAP2Q9Y2D5 859 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 SLX4Q8IY92 1834 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 ZNF609O15014 1411 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 LRRC37AA6NMS7 1700 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 ARAP2Q8WZ64 1704 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 CACNA1SQ13698 1873 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 TTC41PQ6P2S7 1318 aa7.49□□□□□ -1.21
CMTM1-220ENST00000534143 H0YIN7 160 aa7.48□□□□□ -1.21
CMTM1-220ENST00000534143 SNAP23O00161 211 aa7.48□□□□□ -1.21
CMTM1-220ENST00000534143 TAF5LO75529 589 aa7.48□□□□□ -1.21
CMTM1-220ENST00000534143 STAU1O95793 577 aaKnown RBP7.48□□□□□ -1.21
CMTM1-220ENST00000534143 SKIP12755 728 aa7.48□□□□□ -1.21
CMTM1-220ENST00000534143 KCNA3P22001 575 aa7.48□□□□□ -1.21
CMTM1-220ENST00000534143 POLD1P28340 1107 aa7.48□□□□□ -1.21
CMTM1-220ENST00000534143 CHRNA5P30532 468 aa7.48□□□□□ -1.21
CMTM1-220ENST00000534143 UBE4AQ14139 1066 aa7.48□□□□□ -1.21
CMTM1-220ENST00000534143 ATP2B3Q16720 1220 aa7.48□□□□□ -1.21
CMTM1-220ENST00000534143 TTC22Q5TAA0 569 aa7.48□□□□□ -1.21
CMTM1-220ENST00000534143 TMC4Q7Z404 712 aa7.48□□□□□ -1.21
CMTM1-220ENST00000534143 SP8Q8IXZ3 490 aa7.48□□□□□ -1.21
CMTM1-220ENST00000534143 ADAMTS19Q8TE59 1207 aa7.48□□□□□ -1.21
CMTM1-220ENST00000534143 GMCL1Q96IK5 515 aa7.48□□□□□ -1.21
CMTM1-220ENST00000534143 DBNDD2Q9BQY9 259 aa7.48□□□□□ -1.21
CMTM1-220ENST00000534143 COL25A1Q9BXS0 654 aaPredicted RBP7.48□□□□□ -1.21
CMTM1-220ENST00000534143 ANKRD2Q9GZV1 360 aa7.48□□□□□ -1.21
CMTM1-220ENST00000534143 ECHDC1Q9NTX5 307 aa7.48□□□□□ -1.21
CMTM1-220ENST00000534143 LTBP1Q14766 1721 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 AKAP11Q9UKA4 1901 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 WTIPA6NIX2 430 aaPredicted RBP7.47□□□□□ -1.21
CMTM1-220ENST00000534143 GSPT1P15170 499 aaKnown RBP7.47□□□□□ -1.21
CMTM1-220ENST00000534143 ATP5JP18859 108 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 ADORA1P30542 326 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 DEKP35659 375 aaKnown RBP7.47□□□□□ -1.21
CMTM1-220ENST00000534143 SCNN1DP51172 638 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 TGFB2P61812 414 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 PUM3Q15397 648 aaKnown RBP7.47□□□□□ -1.21
CMTM1-220ENST00000534143 EML3Q32P44 896 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 BMP2KLQ5H9B9 411 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 SLC51AQ86UW1 340 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 TRIM22Q8IYM9 498 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 NLGN2Q8NFZ4 835 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 C7orf43Q8WVR3 580 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 LPIN2Q92539 896 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 ZNF622Q969S3 477 aaKnown RBP eCLIP7.47□□□□□ -1.21
CMTM1-220ENST00000534143 NEUROD6Q96NK8 337 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 CNTNAP3BQ96NU0 1288 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 CNTNAP3Q9BZ76 1288 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 TIMMDC1Q9NPL8 285 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 PODXL2Q9NZ53 605 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 LEMD3Q9Y2U8 911 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 ATP6V0A2Q9Y487 856 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 IRS2Q9Y4H2 1338 aa7.47□□□□□ -1.21
CMTM1-220ENST00000534143 BRCA1P38398 1863 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms