RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 MTMR10Q9NXD2 777 aa17.6■□□□□ 0.41
SHARPIN-208ENST00000533948 MORF4L1Q9UBU8 362 aa17.6■□□□□ 0.41
SHARPIN-208ENST00000533948 COL2A1P02458 1487 aaPredicted RBP17.59■□□□□ 0.41
SHARPIN-208ENST00000533948 UQCRFS1P1P0C7P4 283 aa17.59■□□□□ 0.41
SHARPIN-208ENST00000533948 MTX1Q13505 466 aa17.59■□□□□ 0.41
SHARPIN-208ENST00000533948 MAP3K21Q5TCX8 1036 aa17.59■□□□□ 0.41
SHARPIN-208ENST00000533948 CCAR1Q8IX12 1150 aaKnown RBP17.59■□□□□ 0.41
SHARPIN-208ENST00000533948 CLUAP1Q96AJ1 413 aa17.59■□□□□ 0.41
SHARPIN-208ENST00000533948 WDR18Q9BV38 432 aa17.59■□□□□ 0.41
SHARPIN-208ENST00000533948 TRIM34Q9BYJ4 488 aa17.59■□□□□ 0.41
SHARPIN-208ENST00000533948 UBE2OQ9C0C9 1292 aaKnown RBP17.59■□□□□ 0.41
SHARPIN-208ENST00000533948 STXBP5LQ9Y2K9 1186 aa17.59■□□□□ 0.41
SHARPIN-208ENST00000533948 C19orf81C9J6K1 198 aa17.58■□□□□ 0.4
SHARPIN-208ENST00000533948 ASNSP08243 561 aa17.58■□□□□ 0.4
SHARPIN-208ENST00000533948 PLCG2P16885 1265 aa17.58■□□□□ 0.4
SHARPIN-208ENST00000533948 BACE1P56817 501 aa17.58■□□□□ 0.4
SHARPIN-208ENST00000533948 FOXP4Q8IVH2 680 aaPredicted RBP17.58■□□□□ 0.4
SHARPIN-208ENST00000533948 GPRC5AQ8NFJ5 357 aa17.58■□□□□ 0.4
SHARPIN-208ENST00000533948 SH3RF3Q8TEJ3 882 aaPredicted RBP17.58■□□□□ 0.4
SHARPIN-208ENST00000533948 P2RX7Q99572 595 aaKnown RBP17.58■□□□□ 0.4
SHARPIN-208ENST00000533948 NUDT12Q9BQG2 462 aa17.58■□□□□ 0.4
SHARPIN-208ENST00000533948 ZBED9Q6R2W3 1325 aa17.57■□□□□ 0.4
SHARPIN-208ENST00000533948 ARID4AP29374 1257 aaPredicted RBP17.57■□□□□ 0.4
SHARPIN-208ENST00000533948 HOXA7P31268 230 aaPredicted RBP17.57■□□□□ 0.4
SHARPIN-208ENST00000533948 CCL14Q16627 93 aa17.57■□□□□ 0.4
SHARPIN-208ENST00000533948 ZKSCAN2Q63HK3 967 aa17.57■□□□□ 0.4
SHARPIN-208ENST00000533948 TRMT44Q8IYL2 757 aaKnown RBP17.57■□□□□ 0.4
SHARPIN-208ENST00000533948 DNAJC18Q9H819 358 aa17.57■□□□□ 0.4
SHARPIN-208ENST00000533948 GNAI2P04899 355 aa17.56■□□□□ 0.4
SHARPIN-208ENST00000533948 COL6A1P12109 1028 aa17.56■□□□□ 0.4
SHARPIN-208ENST00000533948 XRCC5P13010 732 aaKnown RBP17.56■□□□□ 0.4
SHARPIN-208ENST00000533948 CCND3P30281 292 aaPredicted RBP17.56■□□□□ 0.4
SHARPIN-208ENST00000533948 CACNB2Q08289 660 aaPredicted RBP17.56■□□□□ 0.4
SHARPIN-208ENST00000533948 PDE3AQ14432 1141 aa17.56■□□□□ 0.4
SHARPIN-208ENST00000533948 LRRC26Q2I0M4 334 aa17.56■□□□□ 0.4
SHARPIN-208ENST00000533948 NAA16Q6N069 864 aaPredicted RBP17.56■□□□□ 0.4
SHARPIN-208ENST00000533948 CRACR2BQ8N4Y2 399 aaPredicted RBP17.56■□□□□ 0.4
SHARPIN-208ENST00000533948 TGFBRAP1Q8WUH2 860 aa17.56■□□□□ 0.4
SHARPIN-208ENST00000533948 PORCNQ9H237 461 aa17.56■□□□□ 0.4
SHARPIN-208ENST00000533948 GINM1Q9NU53 330 aa17.56■□□□□ 0.4
SHARPIN-208ENST00000533948 USP17L10C9JJH3 530 aa17.55■□□□□ 0.4
SHARPIN-208ENST00000533948 ZKSCAN1P17029 563 aaPredicted RBP17.55■□□□□ 0.4
SHARPIN-208ENST00000533948 MAPK4P31152 587 aa17.55■□□□□ 0.4
SHARPIN-208ENST00000533948 MCAMP43121 646 aa17.55■□□□□ 0.4
SHARPIN-208ENST00000533948 HERVK_113P62684 666 aa17.55■□□□□ 0.4
SHARPIN-208ENST00000533948 MDM2Q00987 491 aaPredicted RBP17.55■□□□□ 0.4
SHARPIN-208ENST00000533948 Q3C1V9 767 aa17.55■□□□□ 0.4
SHARPIN-208ENST00000533948 CCDC158Q5M9N0 1113 aa17.55■□□□□ 0.4
SHARPIN-208ENST00000533948 POTEEQ6S8J3 1075 aa17.55■□□□□ 0.4
SHARPIN-208ENST00000533948 TMEM57Q8N5G2 664 aa17.55■□□□□ 0.4
SHARPIN-208ENST00000533948 SOCS4Q8WXH5 440 aa17.55■□□□□ 0.4
SHARPIN-208ENST00000533948 AATFQ9NY61 560 aaKnown RBP eCLIP17.55■□□□□ 0.4
SHARPIN-208ENST00000533948 RBPJLQ9UBG7 517 aa17.55■□□□□ 0.4
SHARPIN-208ENST00000533948 GDF11O95390 407 aa17.54■□□□□ 0.4
SHARPIN-208ENST00000533948 PPP4CP60510 307 aa17.54■□□□□ 0.4
SHARPIN-208ENST00000533948 TTC39AQ5SRH9 613 aa17.54■□□□□ 0.4
SHARPIN-208ENST00000533948 LHX8Q68G74 356 aa17.54■□□□□ 0.4
SHARPIN-208ENST00000533948 GTF3C2Q8WUA4 911 aaPredicted RBP17.54■□□□□ 0.4
SHARPIN-208ENST00000533948 USP6NLQ92738 828 aa17.54■□□□□ 0.4
SHARPIN-208ENST00000533948 PAGR1Q9BTK6 254 aa17.54■□□□□ 0.4
SHARPIN-208ENST00000533948 CWC22Q9HCG8 908 aaKnown RBP17.54■□□□□ 0.4
SHARPIN-208ENST00000533948 LAMA2P24043 3122 aaKnown RBP17.54■□□□□ 0.4
SHARPIN-208ENST00000533948 CDK5RAP2Q96SN8 1893 aa17.53■□□□□ 0.4
SHARPIN-208ENST00000533948 GPR142Q7Z601 462 aa17.53■□□□□ 0.4
SHARPIN-208ENST00000533948 MAPKAPK5Q8IW41 473 aa17.53■□□□□ 0.4
SHARPIN-208ENST00000533948 COL25A1Q9BXS0 654 aaPredicted RBP17.53■□□□□ 0.4
SHARPIN-208ENST00000533948 SNRKQ9NRH2 765 aa17.53■□□□□ 0.4
SHARPIN-208ENST00000533948 FRMPD3Q5JV73 1810 aa17.52■□□□□ 0.4
SHARPIN-208ENST00000533948 IGSF3O75054 1194 aa17.52■□□□□ 0.4
SHARPIN-208ENST00000533948 HLA-DOAP06340 250 aa17.52■□□□□ 0.4
SHARPIN-208ENST00000533948 ERVK-9P63128 1117 aa17.52■□□□□ 0.4
SHARPIN-208ENST00000533948 ERVK-24P63145 666 aa17.52■□□□□ 0.4
SHARPIN-208ENST00000533948 MORN1Q5T089 497 aa17.52■□□□□ 0.4
SHARPIN-208ENST00000533948 ADGRA1Q86SQ6 560 aa17.52■□□□□ 0.4
SHARPIN-208ENST00000533948 METTL16Q86W50 562 aaKnown RBP17.52■□□□□ 0.4
SHARPIN-208ENST00000533948 PALD1Q9ULE6 856 aa17.52■□□□□ 0.4
SHARPIN-208ENST00000533948 DNAH12Q6ZR08 3092 aa17.52■□□□□ 0.39
SHARPIN-208ENST00000533948 RGS2P41220 211 aa17.51■□□□□ 0.39
SHARPIN-208ENST00000533948 OS9Q13438 667 aaPredicted RBP17.51■□□□□ 0.39
SHARPIN-208ENST00000533948 PLEKHH3Q7Z736 793 aa17.51■□□□□ 0.39
SHARPIN-208ENST00000533948 FAM161BQ96MY7 647 aa17.51■□□□□ 0.39
SHARPIN-208ENST00000533948 GUCD1Q96NT3 240 aa17.51■□□□□ 0.39
SHARPIN-208ENST00000533948 EMILIN3Q9NT22 766 aa17.51■□□□□ 0.39
SHARPIN-208ENST00000533948 ZBTB21Q9ULJ3 1066 aa17.51■□□□□ 0.39
SHARPIN-208ENST00000533948 NDUFB9Q9Y6M9 179 aa17.51■□□□□ 0.39
SHARPIN-208ENST00000533948 VCANP13611 3396 aa17.51■□□□□ 0.39
SHARPIN-208ENST00000533948 MAST2Q6P0Q8 1798 aa17.51■□□□□ 0.39
SHARPIN-208ENST00000533948 FLT1P17948 1338 aa17.5■□□□□ 0.39
SHARPIN-208ENST00000533948 EYSQ5T1H1 3165 aa17.5■□□□□ 0.39
SHARPIN-208ENST00000533948 PNMA6EA0A0J9YXQ4 647 aa17.5■□□□□ 0.39
SHARPIN-208ENST00000533948 GLRX3O76003 335 aaKnown RBP17.5■□□□□ 0.39
SHARPIN-208ENST00000533948 RLBP1P12271 317 aa17.5■□□□□ 0.39
SHARPIN-208ENST00000533948 USP17L2Q6R6M4 530 aa17.5■□□□□ 0.39
SHARPIN-208ENST00000533948 APBA2Q99767 749 aa17.5■□□□□ 0.39
SHARPIN-208ENST00000533948 GPR108Q9NPR9 543 aa17.5■□□□□ 0.39
SHARPIN-208ENST00000533948 FLRT1Q9NZU1 646 aa17.5■□□□□ 0.39
SHARPIN-208ENST00000533948 SAP30BPQ9UHR5 308 aaKnown RBP17.5■□□□□ 0.39
SHARPIN-208ENST00000533948 MYO5AQ9Y4I1 1855 aaKnown RBP17.5■□□□□ 0.39
SHARPIN-208ENST00000533948 FOCADQ5VW36 1801 aa17.49■□□□□ 0.39
SHARPIN-208ENST00000533948 CNMDO75829 334 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms