RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 ROBO3Q96MS0 1386 aa17.37■□□□□ 0.37
SF3B2-214ENST00000533595 DOCK1Q14185 1865 aa17.37■□□□□ 0.37
SF3B2-214ENST00000533595 GDF11O95390 407 aa17.36■□□□□ 0.37
SF3B2-214ENST00000533595 SLC3A2P08195 630 aaKnown RBP17.36■□□□□ 0.37
SF3B2-214ENST00000533595 ASNSP08243 561 aa17.36■□□□□ 0.37
SF3B2-214ENST00000533595 PTPRAP18433 802 aa17.36■□□□□ 0.37
SF3B2-214ENST00000533595 GJA5P36382 358 aa17.36■□□□□ 0.37
SF3B2-214ENST00000533595 PPATQ06203 517 aa17.36■□□□□ 0.37
SF3B2-214ENST00000533595 ESYT1Q9BSJ8 1104 aa17.36■□□□□ 0.37
SF3B2-214ENST00000533595 JAG1P78504 1218 aa17.35■□□□□ 0.37
SF3B2-214ENST00000533595 KIF23Q02241 960 aaPredicted RBP17.35■□□□□ 0.37
SF3B2-214ENST00000533595 PPIL2Q13356 520 aa17.35■□□□□ 0.37
SF3B2-214ENST00000533595 ABCB5Q2M3G0 1257 aa17.35■□□□□ 0.37
SF3B2-214ENST00000533595 STK11IPQ8N1F8 1099 aa17.35■□□□□ 0.37
SF3B2-214ENST00000533595 ZIC5Q96T25 663 aa17.35■□□□□ 0.37
SF3B2-214ENST00000533595 MKNK2Q9HBH9 465 aa17.35■□□□□ 0.37
SF3B2-214ENST00000533595 ZNF287Q9HBT7 754 aa17.35■□□□□ 0.37
SF3B2-214ENST00000533595 CABP5Q9NP86 173 aa17.35■□□□□ 0.37
SF3B2-214ENST00000533595 ANAPC4Q9UJX5 808 aa17.35■□□□□ 0.37
SF3B2-214ENST00000533595 ZBTB21Q9ULJ3 1066 aa17.35■□□□□ 0.37
SF3B2-214ENST00000533595 ATAD5Q96QE3 1844 aa17.35■□□□□ 0.37
SF3B2-214ENST00000533595 GH2P01242 217 aa17.34■□□□□ 0.37
SF3B2-214ENST00000533595 MYH8P13535 1937 aa17.34■□□□□ 0.37
SF3B2-214ENST00000533595 PDE4BQ07343 736 aa17.34■□□□□ 0.37
SF3B2-214ENST00000533595 KIAA1211Q6ZU35 1233 aa17.34■□□□□ 0.37
SF3B2-214ENST00000533595 CCDC17Q96LX7 622 aa17.34■□□□□ 0.37
SF3B2-214ENST00000533595 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.34■□□□□ 0.37
SF3B2-214ENST00000533595 CTNNA3Q9UI47 895 aa17.34■□□□□ 0.37
SF3B2-214ENST00000533595 ZHX2Q9Y6X8 837 aa17.34■□□□□ 0.37
SF3B2-214ENST00000533595 THSD7BQ9C0I4 1608 aa17.33■□□□□ 0.37
SF3B2-214ENST00000533595 USP17L5A8MUK1 530 aa17.33■□□□□ 0.36
SF3B2-214ENST00000533595 MPHOSPH10O00566 681 aaKnown RBP17.33■□□□□ 0.36
SF3B2-214ENST00000533595 IRF6O14896 467 aa17.33■□□□□ 0.36
SF3B2-214ENST00000533595 GTF2A2P52657 109 aa17.33■□□□□ 0.36
SF3B2-214ENST00000533595 PTH1RQ03431 593 aa17.33■□□□□ 0.36
SF3B2-214ENST00000533595 CTDSPL2Q05D32 466 aa17.33■□□□□ 0.36
SF3B2-214ENST00000533595 SHROOM1Q2M3G4 852 aaPredicted RBP17.33■□□□□ 0.36
SF3B2-214ENST00000533595 CCDC84Q86UT8 332 aaPredicted RBP17.33■□□□□ 0.36
SF3B2-214ENST00000533595 REM2Q8IYK8 340 aaPredicted RBP17.33■□□□□ 0.36
SF3B2-214ENST00000533595 TBC1D2Q9BYX2 928 aa17.33■□□□□ 0.36
SF3B2-214ENST00000533595 MANSC4A6NHS7 340 aaPredicted RBP17.32■□□□□ 0.36
SF3B2-214ENST00000533595 ZNF213O14771 459 aa17.32■□□□□ 0.36
SF3B2-214ENST00000533595 RASA1P20936 1047 aa17.32■□□□□ 0.36
SF3B2-214ENST00000533595 HAND2P61296 217 aa17.32■□□□□ 0.36
SF3B2-214ENST00000533595 SREBF2Q12772 1141 aa17.32■□□□□ 0.36
SF3B2-214ENST00000533595 SNAPC2Q13487 334 aa17.32■□□□□ 0.36
SF3B2-214ENST00000533595 JMYQ8N9B5 988 aa17.32■□□□□ 0.36
SF3B2-214ENST00000533595 AS3MTQ9HBK9 375 aa17.32■□□□□ 0.36
SF3B2-214ENST00000533595 KCNH4Q9UQ05 1017 aa17.32■□□□□ 0.36
SF3B2-214ENST00000533595 AFG3L2Q9Y4W6 797 aa17.32■□□□□ 0.36
SF3B2-214ENST00000533595 CXCL11O14625 94 aa17.31■□□□□ 0.36
SF3B2-214ENST00000533595 PRDM1O75626 825 aa17.31■□□□□ 0.36
SF3B2-214ENST00000533595 AKR1B1P15121 316 aa17.31■□□□□ 0.36
SF3B2-214ENST00000533595 INHBEP58166 350 aa17.31■□□□□ 0.36
SF3B2-214ENST00000533595 RAB3GAP1Q15042 981 aa17.31■□□□□ 0.36
SF3B2-214ENST00000533595 IMMTQ16891 758 aaKnown RBP17.31■□□□□ 0.36
SF3B2-214ENST00000533595 TMEM179Q6ZVK1 233 aa17.31■□□□□ 0.36
SF3B2-214ENST00000533595 ZNF444Q8N0Y2 327 aaPredicted RBP17.31■□□□□ 0.36
SF3B2-214ENST00000533595 ZNF280CQ8ND82 737 aa17.31■□□□□ 0.36
SF3B2-214ENST00000533595 MS4A4AQ96JQ5 239 aa17.31■□□□□ 0.36
SF3B2-214ENST00000533595 U3KPZ7 1027 aaPredicted RBP17.31■□□□□ 0.36
SF3B2-214ENST00000533595 CCL15-CCL14A0A0B4J2E2 113 aa17.3■□□□□ 0.36
SF3B2-214ENST00000533595 TRIM75PA6NK02 468 aa17.3■□□□□ 0.36
SF3B2-214ENST00000533595 CETPP11597 493 aa17.3■□□□□ 0.36
SF3B2-214ENST00000533595 MAP2K1Q02750 393 aaPredicted RBP17.3■□□□□ 0.36
SF3B2-214ENST00000533595 SPP2Q13103 211 aa17.3■□□□□ 0.36
SF3B2-214ENST00000533595 SEPT2Q15019 361 aa17.3■□□□□ 0.36
SF3B2-214ENST00000533595 CCL15Q16663 113 aa17.3■□□□□ 0.36
SF3B2-214ENST00000533595 MAP4K1Q92918 833 aa17.3■□□□□ 0.36
SF3B2-214ENST00000533595 WDR18Q9BV38 432 aa17.3■□□□□ 0.36
SF3B2-214ENST00000533595 LSG1Q9H089 658 aaKnown RBP17.3■□□□□ 0.36
SF3B2-214ENST00000533595 ANO2Q9NQ90 1003 aa17.3■□□□□ 0.36
SF3B2-214ENST00000533595 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.3■□□□□ 0.36
SF3B2-214ENST00000533595 PHIPQ8WWQ0 1821 aa17.3■□□□□ 0.36
SF3B2-214ENST00000533595 ORC4O43929 436 aa17.29■□□□□ 0.36
SF3B2-214ENST00000533595 FGRP09769 529 aa17.29■□□□□ 0.36
SF3B2-214ENST00000533595 PCP11498 1178 aaKnown RBP17.29■□□□□ 0.36
SF3B2-214ENST00000533595 GUCY1A2P33402 732 aa17.29■□□□□ 0.36
SF3B2-214ENST00000533595 TM4SF4P48230 202 aa17.29■□□□□ 0.36
SF3B2-214ENST00000533595 AKNAD1Q5T1N1 836 aa17.29■□□□□ 0.36
SF3B2-214ENST00000533595 MFSD6Q6ZSS7 791 aa17.29■□□□□ 0.36
SF3B2-214ENST00000533595 NBPF3Q9H094 633 aa17.29■□□□□ 0.36
SF3B2-214ENST00000533595 RNF41Q9H4P4 317 aaPredicted RBP17.29■□□□□ 0.36
SF3B2-214ENST00000533595 INCENPQ9NQS7 918 aa17.29■□□□□ 0.36
SF3B2-214ENST00000533595 TACC3Q9Y6A5 838 aa17.29■□□□□ 0.36
SF3B2-214ENST00000533595 LAMA4Q16363 1823 aa17.28■□□□□ 0.36
SF3B2-214ENST00000533595 TESPA1A2RU30 521 aaPredicted RBP17.28■□□□□ 0.36
SF3B2-214ENST00000533595 TBC1D10CQ8IV04 446 aa17.28■□□□□ 0.36
SF3B2-214ENST00000533595 STAG1Q8WVM7 1258 aa17.28■□□□□ 0.36
SF3B2-214ENST00000533595 BRI3BPQ8WY22 251 aa17.28■□□□□ 0.36
SF3B2-214ENST00000533595 TOMM22Q9NS69 142 aa17.28■□□□□ 0.36
SF3B2-214ENST00000533595 RBM8AQ9Y5S9 174 aaKnown RBP17.28■□□□□ 0.36
SF3B2-214ENST00000533595 A0A0G2JLL6 359 aaPredicted RBP17.27■□□□□ 0.36
SF3B2-214ENST00000533595 USP17L10C9JJH3 530 aa17.27■□□□□ 0.36
SF3B2-214ENST00000533595 RANBP6O60518 1105 aaKnown RBP17.27■□□□□ 0.36
SF3B2-214ENST00000533595 TSPY3P0CV98 308 aa17.27■□□□□ 0.36
SF3B2-214ENST00000533595 TSPY8P0CW00 308 aa17.27■□□□□ 0.36
SF3B2-214ENST00000533595 TFAP4Q01664 338 aa17.27■□□□□ 0.36
SF3B2-214ENST00000533595 FAM47AQ5JRC9 791 aa17.27■□□□□ 0.36
SF3B2-214ENST00000533595 PRRT2Q7Z6L0 340 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms