RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 ABCF2Q9UG63 623 aa9.7□□□□□ -0.86
NXF1-215ENST00000533440 PTPRCP08575 1304 aa9.7□□□□□ -0.86
NXF1-215ENST00000533440 FRMPD3Q5JV73 1810 aa9.7□□□□□ -0.86
NXF1-215ENST00000533440 IL15P40933 162 aaPredicted RBP9.69□□□□□ -0.86
NXF1-215ENST00000533440 ERVK-9P63128 1117 aa9.69□□□□□ -0.86
NXF1-215ENST00000533440 ERVK-24P63145 666 aa9.69□□□□□ -0.86
NXF1-215ENST00000533440 MECOMQ03112 1051 aa9.69□□□□□ -0.86
NXF1-215ENST00000533440 MTMR2Q13614 643 aa9.69□□□□□ -0.86
NXF1-215ENST00000533440 LTBP2Q14767 1821 aa9.69□□□□□ -0.86
NXF1-215ENST00000533440 POTEEQ6S8J3 1075 aa9.69□□□□□ -0.86
NXF1-215ENST00000533440 PLEKHH3Q7Z736 793 aa9.69□□□□□ -0.86
NXF1-215ENST00000533440 GTF3C2Q8WUA4 911 aaPredicted RBP9.69□□□□□ -0.86
NXF1-215ENST00000533440 SYMPKQ92797 1274 aaKnown RBP9.69□□□□□ -0.86
NXF1-215ENST00000533440 APBA2Q99767 749 aa9.69□□□□□ -0.86
NXF1-215ENST00000533440 SENP6Q9GZR1 1112 aaPredicted RBP9.69□□□□□ -0.86
NXF1-215ENST00000533440 SIL1Q9H173 461 aa9.69□□□□□ -0.86
NXF1-215ENST00000533440 HERC5Q9UII4 1024 aaKnown RBP9.69□□□□□ -0.86
NXF1-215ENST00000533440 C19orf81C9J6K1 198 aa9.68□□□□□ -0.86
NXF1-215ENST00000533440 SMAD3P84022 425 aaKnown RBP9.68□□□□□ -0.86
NXF1-215ENST00000533440 SHHQ15465 462 aa9.68□□□□□ -0.86
NXF1-215ENST00000533440 ERICH6Q7L0X2 663 aa9.68□□□□□ -0.86
NXF1-215ENST00000533440 MYLIPQ8WY64 445 aa9.68□□□□□ -0.86
NXF1-215ENST00000533440 LPAR1Q92633 364 aa9.68□□□□□ -0.86
NXF1-215ENST00000533440 NSUN4Q96CB9 384 aaKnown RBP9.68□□□□□ -0.86
NXF1-215ENST00000533440 TTYH1Q9H313 450 aaPredicted RBP9.68□□□□□ -0.86
NXF1-215ENST00000533440 TMOD4Q9NZQ9 345 aa9.68□□□□□ -0.86
NXF1-215ENST00000533440 USP17L10C9JJH3 530 aa9.67□□□□□ -0.86
NXF1-215ENST00000533440 DNM1LO00429 736 aa9.67□□□□□ -0.86
NXF1-215ENST00000533440 MSCO60682 206 aa9.67□□□□□ -0.86
NXF1-215ENST00000533440 LDHCP07864 332 aa9.67□□□□□ -0.86
NXF1-215ENST00000533440 ASNSP08243 561 aa9.67□□□□□ -0.86
NXF1-215ENST00000533440 ATN1P54259 1190 aaPredicted RBP9.67□□□□□ -0.86
NXF1-215ENST00000533440 RTP1P59025 263 aa9.67□□□□□ -0.86
NXF1-215ENST00000533440 TIMM10P62072 90 aa9.67□□□□□ -0.86
NXF1-215ENST00000533440 JAG1P78504 1218 aa9.67□□□□□ -0.86
NXF1-215ENST00000533440 MAP2K5Q13163 448 aa9.67□□□□□ -0.86
NXF1-215ENST00000533440 C9orf50Q5SZB4 431 aa9.67□□□□□ -0.86
NXF1-215ENST00000533440 METTL16Q86W50 562 aaKnown RBP9.67□□□□□ -0.86
NXF1-215ENST00000533440 EDC3Q96F86 508 aaKnown RBP9.67□□□□□ -0.86
NXF1-215ENST00000533440 GINM1Q9NU53 330 aa9.67□□□□□ -0.86
NXF1-215ENST00000533440 FLRT1Q9NZU1 646 aa9.67□□□□□ -0.86
NXF1-215ENST00000533440 PI4KBQ9UBF8 816 aa9.67□□□□□ -0.86
NXF1-215ENST00000533440 PRKAG2Q9UGJ0 569 aa9.67□□□□□ -0.86
NXF1-215ENST00000533440 DDX20Q9UHI6 824 aaKnown RBP9.67□□□□□ -0.86
NXF1-215ENST00000533440 SIPA1L1O43166 1804 aa9.67□□□□□ -0.86
NXF1-215ENST00000533440 CNMDO75829 334 aa9.66□□□□□ -0.86
NXF1-215ENST00000533440 IGHA2P01877 340 aa9.66□□□□□ -0.86
NXF1-215ENST00000533440 HOXC6P09630 235 aa9.66□□□□□ -0.86
NXF1-215ENST00000533440 COL9A1P20849 921 aa9.66□□□□□ -0.86
NXF1-215ENST00000533440 GSTO1P78417 241 aa9.66□□□□□ -0.86
NXF1-215ENST00000533440 MFSD14CQ5VZR4 134 aa9.66□□□□□ -0.86
NXF1-215ENST00000533440 CCAR1Q8IX12 1150 aaKnown RBP9.66□□□□□ -0.86
NXF1-215ENST00000533440 XAGE2Q96GT9 111 aa9.66□□□□□ -0.86
NXF1-215ENST00000533440 PAGR1Q9BTK6 254 aa9.66□□□□□ -0.86
NXF1-215ENST00000533440 DNAJC18Q9H819 358 aa9.66□□□□□ -0.86
NXF1-215ENST00000533440 COPRSQ9NQ92 184 aa9.66□□□□□ -0.86
NXF1-215ENST00000533440 EMILIN3Q9NT22 766 aa9.66□□□□□ -0.86
NXF1-215ENST00000533440 PA2G4Q9UQ80 394 aaKnown RBP9.66□□□□□ -0.86
NXF1-215ENST00000533440 RLFQ13129 1914 aa9.66□□□□□ -0.86
NXF1-215ENST00000533440 TMEM265A0A087WTH1 108 aa9.65□□□□□ -0.86
NXF1-215ENST00000533440 A0A1B0GUL7 405 aa9.65□□□□□ -0.86
NXF1-215ENST00000533440 SLC15A5A6NIM6 579 aa9.65□□□□□ -0.86
NXF1-215ENST00000533440 FOSL2P15408 326 aa9.65□□□□□ -0.86
NXF1-215ENST00000533440 PTPREP23469 700 aa9.65□□□□□ -0.86
NXF1-215ENST00000533440 SNX17Q15036 470 aa9.65□□□□□ -0.86
NXF1-215ENST00000533440 SHROOM1Q2M3G4 852 aaPredicted RBP9.65□□□□□ -0.86
NXF1-215ENST00000533440 SLC39A5Q6ZMH5 540 aa9.65□□□□□ -0.86
NXF1-215ENST00000533440 TEX11Q8IYF3 940 aa9.65□□□□□ -0.86
NXF1-215ENST00000533440 TRPV1Q8NER1 839 aa9.65□□□□□ -0.86
NXF1-215ENST00000533440 SSH1Q8WYL5 1049 aa9.65□□□□□ -0.86
NXF1-215ENST00000533440 DHX36Q9H2U1 1008 aaKnown RBP9.65□□□□□ -0.86
NXF1-215ENST00000533440 HMG20BQ9P0W2 317 aa9.65□□□□□ -0.86
NXF1-215ENST00000533440 ATP11BQ9Y2G3 1177 aa9.65□□□□□ -0.86
NXF1-215ENST00000533440 RABGAP1Q9Y3P9 1069 aa9.65□□□□□ -0.86
NXF1-215ENST00000533440 ZNF521Q96K83 1311 aa9.64□□□□□ -0.87
NXF1-215ENST00000533440 GLRX3O76003 335 aaKnown RBP9.64□□□□□ -0.87
NXF1-215ENST00000533440 UBTFL1P0CB47 393 aaPredicted RBP9.64□□□□□ -0.87
NXF1-215ENST00000533440 CCNA1P78396 465 aa9.64□□□□□ -0.87
NXF1-215ENST00000533440 GRB14Q14449 540 aa9.64□□□□□ -0.87
NXF1-215ENST00000533440 MVPQ14764 893 aaKnown RBP9.64□□□□□ -0.87
NXF1-215ENST00000533440 TJAP1Q5JTD0 557 aa9.64□□□□□ -0.87
NXF1-215ENST00000533440 USP17L2Q6R6M4 530 aa9.64□□□□□ -0.87
NXF1-215ENST00000533440 TBC1D9Q6ZT07 1266 aa9.64□□□□□ -0.87
NXF1-215ENST00000533440 FOXP4Q8IVH2 680 aaPredicted RBP9.64□□□□□ -0.87
NXF1-215ENST00000533440 NPLOC4Q8TAT6 608 aa9.64□□□□□ -0.87
NXF1-215ENST00000533440 SH3RF3Q8TEJ3 882 aaPredicted RBP9.64□□□□□ -0.87
NXF1-215ENST00000533440 BADQ92934 168 aa9.64□□□□□ -0.87
NXF1-215ENST00000533440 C12orf42Q96LP6 360 aa9.64□□□□□ -0.87
NXF1-215ENST00000533440 MRS2Q9HD23 443 aa9.64□□□□□ -0.87
NXF1-215ENST00000533440 ZBTB21Q9ULJ3 1066 aa9.64□□□□□ -0.87
NXF1-215ENST00000533440 AKAP2Q9Y2D5 859 aa9.64□□□□□ -0.87
NXF1-215ENST00000533440 TRIM43BA6NCK2 446 aa9.63□□□□□ -0.87
NXF1-215ENST00000533440 TNFRSF10AO00220 468 aa9.63□□□□□ -0.87
NXF1-215ENST00000533440 GDF11O95390 407 aa9.63□□□□□ -0.87
NXF1-215ENST00000533440 CYBAP13498 195 aa9.63□□□□□ -0.87
NXF1-215ENST00000533440 CNGA1P29973 690 aa9.63□□□□□ -0.87
NXF1-215ENST00000533440 CYP2C19P33261 490 aa9.63□□□□□ -0.87
NXF1-215ENST00000533440 ATP2B2Q01814 1243 aa9.63□□□□□ -0.87
NXF1-215ENST00000533440 GJC2Q5T442 439 aaPredicted RBP9.63□□□□□ -0.87
NXF1-215ENST00000533440 C1orf53Q5VUE5 145 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms