RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 TMOD4Q9NZQ9 345 aa14.72□□□□□ -0.05
SF3B2-213ENST00000533421 AGTPBP1Q9UPW5 1226 aa14.72□□□□□ -0.05
SF3B2-213ENST00000533421 C19orf81C9J6K1 198 aa14.71□□□□□ -0.05
SF3B2-213ENST00000533421 SLC34A2O95436 690 aa14.71□□□□□ -0.05
SF3B2-213ENST00000533421 ZFYP08048 801 aaPredicted RBP14.71□□□□□ -0.05
SF3B2-213ENST00000533421 LACTBP83111 547 aaPredicted RBP14.71□□□□□ -0.05
SF3B2-213ENST00000533421 SPP2Q13103 211 aa14.71□□□□□ -0.05
SF3B2-213ENST00000533421 NBPF11Q86T75 865 aa14.71□□□□□ -0.05
SF3B2-213ENST00000533421 PLEKHM2Q8IWE5 1019 aa14.71□□□□□ -0.05
SF3B2-213ENST00000533421 WDR18Q9BV38 432 aa14.71□□□□□ -0.05
SF3B2-213ENST00000533421 CABP5Q9NP86 173 aa14.71□□□□□ -0.05
SF3B2-213ENST00000533421 ATP8A2Q9NTI2 1148 aa14.71□□□□□ -0.05
SF3B2-213ENST00000533421 PTPN22Q9Y2R2 807 aa14.71□□□□□ -0.05
SF3B2-213ENST00000533421 PDE4DIPQ5VU43 2346 aa14.7□□□□□ -0.06
SF3B2-213ENST00000533421 NAV1Q8NEY1 1877 aa14.7□□□□□ -0.06
SF3B2-213ENST00000533421 TCRBV5S4A2TA0A5A2 114 aa14.7□□□□□ -0.06
SF3B2-213ENST00000533421 OSBPP22059 807 aa14.7□□□□□ -0.06
SF3B2-213ENST00000533421 MOGSQ13724 837 aa14.7□□□□□ -0.06
SF3B2-213ENST00000533421 GPAT2Q6NUI2 795 aa14.7□□□□□ -0.06
SF3B2-213ENST00000533421 C17orf99Q6UX52 265 aa14.7□□□□□ -0.06
SF3B2-213ENST00000533421 MCM9Q9NXL9 1143 aa14.7□□□□□ -0.06
SF3B2-213ENST00000533421 PHIPQ8WWQ0 1821 aa14.7□□□□□ -0.06
SF3B2-213ENST00000533421 PTPRFP10586 1907 aa14.7□□□□□ -0.06
SF3B2-213ENST00000533421 SIPA1L1O43166 1804 aa14.69□□□□□ -0.06
SF3B2-213ENST00000533421 USP17L10C9JJH3 530 aa14.69□□□□□ -0.06
SF3B2-213ENST00000533421 GLRX3O76003 335 aaKnown RBP14.69□□□□□ -0.06
SF3B2-213ENST00000533421 RGS19P49795 217 aa14.69□□□□□ -0.06
SF3B2-213ENST00000533421 MLLT1Q03111 559 aaPredicted RBP14.69□□□□□ -0.06
SF3B2-213ENST00000533421 CERKLQ49MI3 558 aaPredicted RBP14.69□□□□□ -0.06
SF3B2-213ENST00000533421 SH3D19Q5HYK7 790 aa14.69□□□□□ -0.06
SF3B2-213ENST00000533421 KBTBD3Q8NAB2 608 aa14.69□□□□□ -0.06
SF3B2-213ENST00000533421 STAP2Q9UGK3 403 aa14.69□□□□□ -0.06
SF3B2-213ENST00000533421 SWAP70Q9UH65 585 aa14.69□□□□□ -0.06
SF3B2-213ENST00000533421 CPA4Q9UI42 421 aa14.69□□□□□ -0.06
SF3B2-213ENST00000533421 ZBTB21Q9ULJ3 1066 aa14.69□□□□□ -0.06
SF3B2-213ENST00000533421 MBD4O95243 580 aa14.68□□□□□ -0.06
SF3B2-213ENST00000533421 FMNL1O95466 1100 aaPredicted RBP14.68□□□□□ -0.06
SF3B2-213ENST00000533421 SLURP2P0DP57 97 aa14.68□□□□□ -0.06
SF3B2-213ENST00000533421 GCLCP48506 637 aaPredicted RBP14.68□□□□□ -0.06
SF3B2-213ENST00000533421 HMGCS2P54868 508 aa14.68□□□□□ -0.06
SF3B2-213ENST00000533421 FCGRTP55899 365 aa14.68□□□□□ -0.06
SF3B2-213ENST00000533421 BACE1P56817 501 aa14.68□□□□□ -0.06
SF3B2-213ENST00000533421 SLC4A8Q2Y0W8 1093 aa14.68□□□□□ -0.06
SF3B2-213ENST00000533421 TATDN1Q6P1N9 297 aa14.68□□□□□ -0.06
SF3B2-213ENST00000533421 LCORLQ8N3X6 602 aa14.68□□□□□ -0.06
SF3B2-213ENST00000533421 DNAJC18Q9H819 358 aa14.68□□□□□ -0.06
SF3B2-213ENST00000533421 ARMT1Q9H993 441 aa14.68□□□□□ -0.06
SF3B2-213ENST00000533421 DCP1AQ9NPI6 582 aaPredicted RBP14.68□□□□□ -0.06
SF3B2-213ENST00000533421 ADGRA2Q96PE1 1338 aa14.67□□□□□ -0.06
SF3B2-213ENST00000533421 GDF11O95390 407 aa14.67□□□□□ -0.06
SF3B2-213ENST00000533421 CYP2C8P10632 490 aa14.67□□□□□ -0.06
SF3B2-213ENST00000533421 PSMC4P43686 418 aa14.67□□□□□ -0.06
SF3B2-213ENST00000533421 USP14P54578 494 aa14.67□□□□□ -0.06
SF3B2-213ENST00000533421 IRX3P78415 501 aaPredicted RBP14.67□□□□□ -0.06
SF3B2-213ENST00000533421 MTMR2Q13614 643 aa14.67□□□□□ -0.06
SF3B2-213ENST00000533421 ABCB5Q2M3G0 1257 aa14.67□□□□□ -0.06
SF3B2-213ENST00000533421 SLC9C1Q4G0N8 1177 aa14.67□□□□□ -0.06
SF3B2-213ENST00000533421 CENPQQ7L2Z9 268 aaPredicted RBP14.67□□□□□ -0.06
SF3B2-213ENST00000533421 GTF3C2Q8WUA4 911 aaPredicted RBP14.67□□□□□ -0.06
SF3B2-213ENST00000533421 FEZ1Q99689 392 aa14.67□□□□□ -0.06
SF3B2-213ENST00000533421 LOC285556D6RIA3 1793 aa14.67□□□□□ -0.06
SF3B2-213ENST00000533421 DDX60LQ5H9U9 1706 aaKnown RBP14.66□□□□□ -0.06
SF3B2-213ENST00000533421 TRIM6-TRIM34B2RNG4 842 aa14.66□□□□□ -0.06
SF3B2-213ENST00000533421 GH2P01242 217 aa14.66□□□□□ -0.06
SF3B2-213ENST00000533421 BCRP11274 1271 aa14.66□□□□□ -0.06
SF3B2-213ENST00000533421 GNAT2P19087 354 aa14.66□□□□□ -0.06
SF3B2-213ENST00000533421 USP17L2Q6R6M4 530 aa14.66□□□□□ -0.06
SF3B2-213ENST00000533421 CCDC84Q86UT8 332 aaPredicted RBP14.66□□□□□ -0.06
SF3B2-213ENST00000533421 SDR42E1Q8WUS8 393 aa14.66□□□□□ -0.06
SF3B2-213ENST00000533421 APPBP2Q92624 585 aa14.66□□□□□ -0.06
SF3B2-213ENST00000533421 RILPL2Q969X0 211 aa14.66□□□□□ -0.06
SF3B2-213ENST00000533421 FSD1Q9BTV5 496 aa14.66□□□□□ -0.06
SF3B2-213ENST00000533421 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.66□□□□□ -0.06
SF3B2-213ENST00000533421 SLC4A4Q9Y6R1 1079 aa14.66□□□□□ -0.06
SF3B2-213ENST00000533421 SOX10P56693 466 aa14.65□□□□□ -0.06
SF3B2-213ENST00000533421 RRP1BQ14684 758 aaKnown RBP14.65□□□□□ -0.06
SF3B2-213ENST00000533421 RAB3GAP1Q15042 981 aa14.65□□□□□ -0.06
SF3B2-213ENST00000533421 FAM110CQ1W6H9 321 aa14.65□□□□□ -0.06
SF3B2-213ENST00000533421 GIMAP6Q6P9H5 292 aa14.65□□□□□ -0.06
SF3B2-213ENST00000533421 RAET1EQ8TD07 263 aa14.65□□□□□ -0.06
SF3B2-213ENST00000533421 ARMC5Q96C12 935 aa14.65□□□□□ -0.06
SF3B2-213ENST00000533421 CCDC17Q96LX7 622 aa14.65□□□□□ -0.06
SF3B2-213ENST00000533421 TMEM106CQ9BVX2 250 aa14.65□□□□□ -0.06
SF3B2-213ENST00000533421 PPP4R2Q9NY27 417 aa14.65□□□□□ -0.06
SF3B2-213ENST00000533421 ARPP21Q9UBL0 812 aaPredicted RBP14.65□□□□□ -0.06
SF3B2-213ENST00000533421 MPHOSPH10O00566 681 aaKnown RBP14.64□□□□□ -0.07
SF3B2-213ENST00000533421 RNF113AO15541 343 aaKnown RBP14.64□□□□□ -0.07
SF3B2-213ENST00000533421 GSPT1P15170 499 aaKnown RBP14.64□□□□□ -0.07
SF3B2-213ENST00000533421 HOXA7P31268 230 aaPredicted RBP14.64□□□□□ -0.07
SF3B2-213ENST00000533421 PLCD1P51178 756 aa14.64□□□□□ -0.07
SF3B2-213ENST00000533421 TREML2Q5T2D2 321 aa14.64□□□□□ -0.07
SF3B2-213ENST00000533421 COA7Q96BR5 231 aa14.64□□□□□ -0.07
SF3B2-213ENST00000533421 SEC62Q99442 399 aaKnown RBP14.64□□□□□ -0.07
SF3B2-213ENST00000533421 SH2D4AQ9H788 454 aa14.64□□□□□ -0.07
SF3B2-213ENST00000533421 ZNF287Q9HBT7 754 aa14.64□□□□□ -0.07
SF3B2-213ENST00000533421 SRRDQ9UH36 339 aa14.64□□□□□ -0.07
SF3B2-213ENST00000533421 PTCH2Q9Y6C5 1203 aa14.64□□□□□ -0.07
SF3B2-213ENST00000533421 MYPNQ86TC9 1320 aa14.64□□□□□ -0.07
SF3B2-213ENST00000533421 BAZ2AQ9UIF9 1905 aaKnown RBP14.63□□□□□ -0.07
SF3B2-213ENST00000533421 M0R2C6 588 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms