RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 DESI2Q9BSY9 194 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 ANKRD2Q9GZV1 360 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 TNKSO95271 1327 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 TSPOAP1O95153 1857 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 CTAGE9A4FU28 777 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 AKR1B15C9JRZ8 316 aaPredicted RBP13.76□□□□□ -0.21
BDNF-218ENST00000533246 PARP1P09874 1014 aaKnown RBP13.76□□□□□ -0.21
BDNF-218ENST00000533246 GNA11P29992 359 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 EVCP57679 992 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 DNAJC21Q5F1R6 531 aaKnown RBP13.76□□□□□ -0.21
BDNF-218ENST00000533246 FANCBQ8NB91 859 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 SMARCC2Q8TAQ2 1214 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 ALS2CR12Q96Q35 445 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 FANCLQ9NW38 375 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 SSH2Q76I76 1423 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 CYP2D7A0A087X1C5 515 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 ANKRD62A6NC57 917 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 PDE4DQ08499 809 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 KIF5AQ12840 1032 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 TBC1D7Q9P0N9 293 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 ADCY9O60503 1353 aa13.76□□□□□ -0.21
BDNF-218ENST00000533246 PTCH1Q13635 1447 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 LOC102724428A0A0B4J2F2 783 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 CCNT1O60563 726 aaKnown RBP13.75□□□□□ -0.21
BDNF-218ENST00000533246 CDC25AP30304 524 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 KRT9P35527 623 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 SIK1P57059 783 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 CHRNDQ07001 517 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 WWC2Q6AWC2 1192 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 CHD1O14646 1710 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 TRAF5O00463 557 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 NLRP12P59046 1061 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 IFFO1Q0D2I5 559 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 OGFOD1Q8N543 542 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 PIGBQ92521 554 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 CXorf56Q9H5V9 222 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 PCDHA5Q9Y5H7 936 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 HLFQ16534 295 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 DYDC1Q8WWB3 177 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 SUDS3Q9H7L9 328 aaPredicted RBP13.75□□□□□ -0.21
BDNF-218ENST00000533246 SLC24A3Q9HC58 644 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 NLRP1Q9C000 1473 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 KIF1BO60333 1816 aa13.75□□□□□ -0.21
BDNF-218ENST00000533246 MYO1CO00159 1063 aa13.74□□□□□ -0.21
BDNF-218ENST00000533246 CAPN2P17655 700 aa13.74□□□□□ -0.21
BDNF-218ENST00000533246 DPCR1Q3MIW9 517 aa13.74□□□□□ -0.21
BDNF-218ENST00000533246 CCDC122Q5T0U0 273 aa13.74□□□□□ -0.21
BDNF-218ENST00000533246 NOSTRINQ8IVI9 506 aa13.74□□□□□ -0.21
BDNF-218ENST00000533246 MAP3K15Q6ZN16 1313 aa13.74□□□□□ -0.21
BDNF-218ENST00000533246 MROH5Q6ZUA9 1318 aa13.74□□□□□ -0.21
BDNF-218ENST00000533246 CHRM1P11229 460 aaPredicted RBP13.74□□□□□ -0.21
BDNF-218ENST00000533246 NR5A1Q13285 461 aa13.74□□□□□ -0.21
BDNF-218ENST00000533246 APOA5Q6Q788 366 aa13.74□□□□□ -0.21
BDNF-218ENST00000533246 GPKOWQ92917 476 aaPredicted RBP eCLIP13.74□□□□□ -0.21
BDNF-218ENST00000533246 GSTTP1A0A1W2PQM5 241 aa13.74□□□□□ -0.21
BDNF-218ENST00000533246 SPDYE3A6NKU9 549 aa13.74□□□□□ -0.21
BDNF-218ENST00000533246 C11orf57Q6ZUT1 292 aaPredicted RBP13.74□□□□□ -0.21
BDNF-218ENST00000533246 CSGALNACT2Q8N6G5 542 aa13.74□□□□□ -0.21
BDNF-218ENST00000533246 IL25Q9H293 177 aa13.74□□□□□ -0.21
BDNF-218ENST00000533246 DYNLL1P63167 89 aaKnown RBP13.74□□□□□ -0.21
BDNF-218ENST00000533246 MAATS1Q7Z4T9 603 aa13.74□□□□□ -0.21
BDNF-218ENST00000533246 GRAMD1CQ8IYS0 662 aa13.74□□□□□ -0.21
BDNF-218ENST00000533246 HINFPQ9BQA5 517 aa13.74□□□□□ -0.21
BDNF-218ENST00000533246 CDK12Q9NYV4 1490 aaPredicted RBP13.73□□□□□ -0.21
BDNF-218ENST00000533246 IVLP07476 585 aa13.73□□□□□ -0.21
BDNF-218ENST00000533246 GYS2P54840 703 aa13.73□□□□□ -0.21
BDNF-218ENST00000533246 PNPLA6Q8IY17 1366 aa13.73□□□□□ -0.21
BDNF-218ENST00000533246 GTF2IP78347 998 aa13.73□□□□□ -0.21
BDNF-218ENST00000533246 FNBP4Q8N3X1 1017 aaPredicted RBP13.73□□□□□ -0.21
BDNF-218ENST00000533246 GDAP1L1Q96MZ0 367 aa13.73□□□□□ -0.21
BDNF-218ENST00000533246 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.73□□□□□ -0.21
BDNF-218ENST00000533246 CHMP2AO43633 222 aa13.73□□□□□ -0.21
BDNF-218ENST00000533246 CRKLP46109 303 aaKnown RBP13.73□□□□□ -0.21
BDNF-218ENST00000533246 USPL1Q5W0Q7 1092 aa13.73□□□□□ -0.21
BDNF-218ENST00000533246 NLRP10Q86W26 655 aa13.73□□□□□ -0.21
BDNF-218ENST00000533246 MLKLQ8NB16 471 aa13.73□□□□□ -0.21
BDNF-218ENST00000533246 PPM1EQ8WY54 764 aa13.73□□□□□ -0.21
BDNF-218ENST00000533246 SLF1Q9BQI6 1058 aa13.73□□□□□ -0.21
BDNF-218ENST00000533246 KRT86O43790 486 aa13.72□□□□□ -0.21
BDNF-218ENST00000533246 PPP2R3AQ06190 1150 aa13.72□□□□□ -0.21
BDNF-218ENST00000533246 TTLL12Q14166 644 aaPredicted RBP13.72□□□□□ -0.21
BDNF-218ENST00000533246 DCAF17Q5H9S7 520 aaPredicted RBP13.72□□□□□ -0.21
BDNF-218ENST00000533246 RASGRP4Q8TDF6 673 aa13.72□□□□□ -0.21
BDNF-218ENST00000533246 CACTINQ8WUQ7 758 aaKnown RBP13.72□□□□□ -0.21
BDNF-218ENST00000533246 SCLT1Q96NL6 688 aa13.72□□□□□ -0.21
BDNF-218ENST00000533246 NOC4LQ9BVI4 516 aaKnown RBP13.72□□□□□ -0.21
BDNF-218ENST00000533246 PLEKHA4Q9H4M7 779 aa13.72□□□□□ -0.21
BDNF-218ENST00000533246 ZNF215Q9UL58 517 aaPredicted RBP13.72□□□□□ -0.21
BDNF-218ENST00000533246 A2ML1A8K2U0 1454 aa13.72□□□□□ -0.21
BDNF-218ENST00000533246 SEPT7Q16181 437 aaKnown RBP13.72□□□□□ -0.21
BDNF-218ENST00000533246 MAEAQ7L5Y9 396 aa13.72□□□□□ -0.21
BDNF-218ENST00000533246 SMYD4Q8IYR2 804 aaPredicted RBP13.72□□□□□ -0.21
BDNF-218ENST00000533246 ZSWIM5Q9P217 1185 aa13.72□□□□□ -0.21
BDNF-218ENST00000533246 SEMA3FQ13275 785 aa13.72□□□□□ -0.21
BDNF-218ENST00000533246 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.72□□□□□ -0.21
BDNF-218ENST00000533246 CCDC97Q96F63 343 aaPredicted RBP13.72□□□□□ -0.21
BDNF-218ENST00000533246 NUCKS1Q9H1E3 243 aaKnown RBP13.72□□□□□ -0.21
BDNF-218ENST00000533246 MAP3K4Q9Y6R4 1608 aa13.71□□□□□ -0.21
BDNF-218ENST00000533246 PLCG2P16885 1265 aa13.71□□□□□ -0.21
BDNF-218ENST00000533246 CETN1Q12798 172 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms