RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 EPHX2P34913 555 aa21.72■■□□□ 1.07
SMPD1-208ENST00000533123 TNNI2P48788 182 aa21.72■■□□□ 1.07
SMPD1-208ENST00000533123 STK3Q13188 491 aa21.72■■□□□ 1.07
SMPD1-208ENST00000533123 TNFAIP1Q13829 316 aa21.72■■□□□ 1.07
SMPD1-208ENST00000533123 BRF1Q92994 677 aa21.72■■□□□ 1.07
SMPD1-208ENST00000533123 FAM196BA6NMK8 535 aa21.71■■□□□ 1.07
SMPD1-208ENST00000533123 FAM47AQ5JRC9 791 aa21.71■■□□□ 1.07
SMPD1-208ENST00000533123 ZKSCAN3Q9BRR0 538 aa21.71■■□□□ 1.07
SMPD1-208ENST00000533123 GPHNQ9NQX3 736 aaPredicted RBP21.71■■□□□ 1.07
SMPD1-208ENST00000533123 POTECB2RU33 542 aa21.71■■□□□ 1.07
SMPD1-208ENST00000533123 FGD1P98174 961 aa21.71■■□□□ 1.07
SMPD1-208ENST00000533123 CRACR2BQ8N4Y2 399 aaPredicted RBP21.71■■□□□ 1.07
SMPD1-208ENST00000533123 DEFB129Q9H1M3 183 aa21.71■■□□□ 1.07
SMPD1-208ENST00000533123 EHD4Q9H223 541 aa21.71■■□□□ 1.07
SMPD1-208ENST00000533123 SMC3Q9UQE7 1217 aa21.71■■□□□ 1.07
SMPD1-208ENST00000533123 DNAJC18Q9H819 358 aa21.7■■□□□ 1.06
SMPD1-208ENST00000533123 ZNF287Q9HBT7 754 aa21.7■■□□□ 1.06
SMPD1-208ENST00000533123 COL2A1P02458 1487 aaPredicted RBP21.7■■□□□ 1.06
SMPD1-208ENST00000533123 BAG4O95429 457 aaKnown RBP21.7■■□□□ 1.06
SMPD1-208ENST00000533123 RASA1P20936 1047 aa21.7■■□□□ 1.06
SMPD1-208ENST00000533123 ZNF444Q8N0Y2 327 aaPredicted RBP21.7■■□□□ 1.06
SMPD1-208ENST00000533123 CHAMP1Q96JM3 812 aa21.7■■□□□ 1.06
SMPD1-208ENST00000533123 SIPA1L1O43166 1804 aa21.69■■□□□ 1.06
SMPD1-208ENST00000533123 POLR2AP24928 1970 aaKnown RBP21.69■■□□□ 1.06
SMPD1-208ENST00000533123 BRD1O95696 1058 aa21.69■■□□□ 1.06
SMPD1-208ENST00000533123 FOXP4Q8IVH2 680 aaPredicted RBP21.69■■□□□ 1.06
SMPD1-208ENST00000533123 PGAP2Q9UHJ9 254 aa21.69■■□□□ 1.06
SMPD1-208ENST00000533123 IQCA1LA6NCM1 817 aa21.68■■□□□ 1.06
SMPD1-208ENST00000533123 TSPY2A6NKD2 308 aa21.68■■□□□ 1.06
SMPD1-208ENST00000533123 GJB2P29033 226 aa21.68■■□□□ 1.06
SMPD1-208ENST00000533123 TFAP4Q01664 338 aa21.68■■□□□ 1.06
SMPD1-208ENST00000533123 CLEC17AQ6ZS10 378 aa21.68■■□□□ 1.06
SMPD1-208ENST00000533123 APOBEC3FQ8IUX4 373 aaKnown RBP21.68■■□□□ 1.06
SMPD1-208ENST00000533123 TAF1DQ9H5J8 278 aaPredicted RBP21.68■■□□□ 1.06
SMPD1-208ENST00000533123 DDX11L8A8MPP1 907 aa21.68■■□□□ 1.06
SMPD1-208ENST00000533123 SHMT1P34896 483 aa21.68■■□□□ 1.06
SMPD1-208ENST00000533123 USP50Q70EL3 339 aaPredicted RBP21.68■■□□□ 1.06
SMPD1-208ENST00000533123 TEPSINQ96N21 525 aa21.68■■□□□ 1.06
SMPD1-208ENST00000533123 TRIM34Q9BYJ4 488 aa21.68■■□□□ 1.06
SMPD1-208ENST00000533123 SWAP70Q9UH65 585 aa21.68■■□□□ 1.06
SMPD1-208ENST00000533123 APOBRQ0VD83 1088 aa21.67■■□□□ 1.06
SMPD1-208ENST00000533123 WDR19Q8NEZ3 1342 aa21.67■■□□□ 1.06
SMPD1-208ENST00000533123 SCN4AP35499 1836 aa21.67■■□□□ 1.06
SMPD1-208ENST00000533123 IFIT3O14879 490 aaKnown RBP21.67■■□□□ 1.06
SMPD1-208ENST00000533123 NMT2O60551 498 aa21.67■■□□□ 1.06
SMPD1-208ENST00000533123 EAPPQ56P03 285 aaPredicted RBP21.67■■□□□ 1.06
SMPD1-208ENST00000533123 PRAMEF18Q5VWM3 479 aa21.67■■□□□ 1.06
SMPD1-208ENST00000533123 MIGA2Q7L4E1 593 aa21.67■■□□□ 1.06
SMPD1-208ENST00000533123 IGDCC4Q8TDY8 1250 aa21.67■■□□□ 1.06
SMPD1-208ENST00000533123 AGXT2Q9BYV1 514 aa21.67■■□□□ 1.06
SMPD1-208ENST00000533123 TSPY3P0CV98 308 aa21.66■■□□□ 1.06
SMPD1-208ENST00000533123 TSPY8P0CW00 308 aa21.66■■□□□ 1.06
SMPD1-208ENST00000533123 METTL16Q86W50 562 aaKnown RBP21.66■■□□□ 1.06
SMPD1-208ENST00000533123 UBAC1Q9BSL1 405 aa21.66■■□□□ 1.06
SMPD1-208ENST00000533123 WDR90Q96KV7 1748 aa21.66■■□□□ 1.06
SMPD1-208ENST00000533123 TMEM67Q5HYA8 995 aa21.65■■□□□ 1.06
SMPD1-208ENST00000533123 IQCA1Q86XH1 822 aa21.65■■□□□ 1.06
SMPD1-208ENST00000533123 GTF3C6Q969F1 213 aa21.65■■□□□ 1.06
SMPD1-208ENST00000533123 TMEM87BQ96K49 555 aa21.65■■□□□ 1.06
SMPD1-208ENST00000533123 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.65■■□□□ 1.06
SMPD1-208ENST00000533123 SENP2Q9HC62 589 aa21.65■■□□□ 1.06
SMPD1-208ENST00000533123 SH2B2O14492 632 aaPredicted RBP21.65■■□□□ 1.06
SMPD1-208ENST00000533123 SYT1P21579 422 aa21.65■■□□□ 1.06
SMPD1-208ENST00000533123 DCPSQ96C86 337 aaKnown RBP21.65■■□□□ 1.06
SMPD1-208ENST00000533123 ZSCAN10Q96SZ4 725 aaPredicted RBP21.65■■□□□ 1.06
SMPD1-208ENST00000533123 ANGEL1Q9UNK9 670 aaKnown RBP21.65■■□□□ 1.06
SMPD1-208ENST00000533123 SART3Q15020 963 aaKnown RBP21.64■■□□□ 1.06
SMPD1-208ENST00000533123 NBPF12Q5TAG4 269 aaPredicted RBP21.64■■□□□ 1.06
SMPD1-208ENST00000533123 FBXL16Q8N461 479 aa21.64■■□□□ 1.06
SMPD1-208ENST00000533123 ZNF526Q8TF50 670 aaPredicted RBP21.64■■□□□ 1.06
SMPD1-208ENST00000533123 RRAGCQ9HB90 399 aa21.64■■□□□ 1.06
SMPD1-208ENST00000533123 HERC5Q9UII4 1024 aaKnown RBP21.64■■□□□ 1.06
SMPD1-208ENST00000533123 TNKSO95271 1327 aa21.64■■□□□ 1.06
SMPD1-208ENST00000533123 MYH8P13535 1937 aa21.64■■□□□ 1.05
SMPD1-208ENST00000533123 AKR1B1P15121 316 aa21.64■■□□□ 1.05
SMPD1-208ENST00000533123 TATDN1Q6P1N9 297 aa21.64■■□□□ 1.05
SMPD1-208ENST00000533123 DLK2Q6UY11 383 aa21.64■■□□□ 1.05
SMPD1-208ENST00000533123 LY9Q9HBG7 655 aa21.64■■□□□ 1.05
SMPD1-208ENST00000533123 IL17RBQ9NRM6 502 aa21.64■■□□□ 1.05
SMPD1-208ENST00000533123 PITPNM2Q9BZ72 1349 aa21.64■■□□□ 1.05
SMPD1-208ENST00000533123 ERICH2A1L162 156 aa21.63■■□□□ 1.05
SMPD1-208ENST00000533123 SCRN1Q12765 414 aa21.63■■□□□ 1.05
SMPD1-208ENST00000533123 MCTP1Q6DN14 999 aa21.63■■□□□ 1.05
SMPD1-208ENST00000533123 BRPF3Q9ULD4 1205 aa21.63■■□□□ 1.05
SMPD1-208ENST00000533123 CERKLQ49MI3 558 aaPredicted RBP21.63■■□□□ 1.05
SMPD1-208ENST00000533123 PNMA8AQ86V59 439 aaPredicted RBP21.63■■□□□ 1.05
SMPD1-208ENST00000533123 ENAHQ8N8S7 591 aaPredicted RBP21.63■■□□□ 1.05
SMPD1-208ENST00000533123 WDR33Q9C0J8 1336 aaKnown RBP21.63■■□□□ 1.05
SMPD1-208ENST00000533123 NAP1L2Q9ULW6 460 aaPredicted RBP21.63■■□□□ 1.05
SMPD1-208ENST00000533123 STX6O43752 255 aa21.62■■□□□ 1.05
SMPD1-208ENST00000533123 WTAPQ15007 396 aa21.62■■□□□ 1.05
SMPD1-208ENST00000533123 SEC23AQ15436 765 aa21.62■■□□□ 1.05
SMPD1-208ENST00000533123 SHROOM1Q2M3G4 852 aaPredicted RBP21.62■■□□□ 1.05
SMPD1-208ENST00000533123 SULF1Q8IWU6 871 aa21.62■■□□□ 1.05
SMPD1-208ENST00000533123 NEDD1Q8NHV4 660 aa21.62■■□□□ 1.05
SMPD1-208ENST00000533123 ZC3H15Q8WU90 426 aaKnown RBP21.62■■□□□ 1.05
SMPD1-208ENST00000533123 MPHOSPH10O00566 681 aaKnown RBP21.61■■□□□ 1.05
SMPD1-208ENST00000533123 JAK2O60674 1132 aa21.61■■□□□ 1.05
SMPD1-208ENST00000533123 PFKFB2O60825 505 aa21.61■■□□□ 1.05
SMPD1-208ENST00000533123 POTEIP0CG38 1075 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms