RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 POSTNQ15063 836 aa17.09■□□□□ 0.33
SSH3-210ENST00000532881 SAFBQ15424 915 aaKnown RBP eCLIP17.09■□□□□ 0.33
SSH3-210ENST00000532881 KLHL10Q6JEL2 608 aa17.09■□□□□ 0.33
SSH3-210ENST00000532881 FBXO38Q6PIJ6 1188 aa17.09■□□□□ 0.33
SSH3-210ENST00000532881 PTF1AQ7RTS3 328 aa17.09■□□□□ 0.33
SSH3-210ENST00000532881 DDB1Q16531 1140 aa17.09■□□□□ 0.33
SSH3-210ENST00000532881 ENAHQ8N8S7 591 aaPredicted RBP17.09■□□□□ 0.33
SSH3-210ENST00000532881 DHX58Q96C10 678 aa17.09■□□□□ 0.33
SSH3-210ENST00000532881 EPC1Q9H2F5 836 aa17.09■□□□□ 0.33
SSH3-210ENST00000532881 NFE2L3Q9Y4A8 694 aa17.09■□□□□ 0.33
SSH3-210ENST00000532881 COL1A1P02452 1464 aaPredicted RBP17.09■□□□□ 0.33
SSH3-210ENST00000532881 MAGEB6P1A0A0J9YX57 407 aa17.08■□□□□ 0.33
SSH3-210ENST00000532881 NUTM2BA6NNL0 878 aaPredicted RBP17.08■□□□□ 0.33
SSH3-210ENST00000532881 NUTM2EB1AL46 878 aaPredicted RBP17.08■□□□□ 0.33
SSH3-210ENST00000532881 PTPREP23469 700 aa17.08■□□□□ 0.33
SSH3-210ENST00000532881 SART3Q15020 963 aaKnown RBP17.08■□□□□ 0.33
SSH3-210ENST00000532881 FAM47AQ5JRC9 791 aa17.08■□□□□ 0.33
SSH3-210ENST00000532881 NUTM2AQ8IVF1 878 aaPredicted RBP17.08■□□□□ 0.33
SSH3-210ENST00000532881 CCDC150Q8NCX0 1101 aa17.08■□□□□ 0.33
SSH3-210ENST00000532881 CELF1Q92879 486 aaKnown RBP17.08■□□□□ 0.33
SSH3-210ENST00000532881 TFCP2L1Q9NZI6 479 aa17.08■□□□□ 0.33
SSH3-210ENST00000532881 MYH14Q7Z406 1995 aaKnown RBP17.08■□□□□ 0.32
SSH3-210ENST00000532881 PKN1Q16512 942 aa17.08■□□□□ 0.32
SSH3-210ENST00000532881 SMAP1Q8IYB5 467 aaPredicted RBP17.08■□□□□ 0.32
SSH3-210ENST00000532881 CHD4Q14839 1912 aa17.08■□□□□ 0.32
SSH3-210ENST00000532881 DEXIO95424 95 aa17.07■□□□□ 0.32
SSH3-210ENST00000532881 TOP1P11387 765 aaKnown RBP17.07■□□□□ 0.32
SSH3-210ENST00000532881 CDK11BP21127 795 aaKnown RBP17.07■□□□□ 0.32
SSH3-210ENST00000532881 SEC23AQ15436 765 aa17.07■□□□□ 0.32
SSH3-210ENST00000532881 ZNF174Q15697 407 aa17.07■□□□□ 0.32
SSH3-210ENST00000532881 ST7Q9NRC1 585 aa17.07■□□□□ 0.32
SSH3-210ENST00000532881 FAM237AA0A1B0GTK4 181 aa17.07■□□□□ 0.32
SSH3-210ENST00000532881 CYP2D6P10635 497 aa17.07■□□□□ 0.32
SSH3-210ENST00000532881 VSTM4Q8IW00 320 aa17.07■□□□□ 0.32
SSH3-210ENST00000532881 ZBTB9Q96C00 473 aa17.07■□□□□ 0.32
SSH3-210ENST00000532881 RIOK1Q9BRS2 568 aaKnown RBP17.07■□□□□ 0.32
SSH3-210ENST00000532881 BAZ2AQ9UIF9 1905 aaKnown RBP17.07■□□□□ 0.32
SSH3-210ENST00000532881 MYH2Q9UKX2 1941 aa17.06■□□□□ 0.32
SSH3-210ENST00000532881 A0A0U1RQJ8 604 aa17.06■□□□□ 0.32
SSH3-210ENST00000532881 ATRIPQ8WXE1 791 aa17.06■□□□□ 0.32
SSH3-210ENST00000532881 DESI2Q9BSY9 194 aa17.06■□□□□ 0.32
SSH3-210ENST00000532881 PNPLA7Q6ZV29 1317 aa17.06■□□□□ 0.32
SSH3-210ENST00000532881 STK36Q9NRP7 1315 aa17.06■□□□□ 0.32
SSH3-210ENST00000532881 USP17L12C9JPN9 530 aa17.06■□□□□ 0.32
SSH3-210ENST00000532881 USP17L21D6R901 530 aa17.06■□□□□ 0.32
SSH3-210ENST00000532881 SLU7O95391 586 aaKnown RBP17.06■□□□□ 0.32
SSH3-210ENST00000532881 MTF1Q14872 753 aa17.06■□□□□ 0.32
SSH3-210ENST00000532881 MTMR7Q9Y216 660 aa17.06■□□□□ 0.32
SSH3-210ENST00000532881 DOT1LQ8TEK3 1739 aa17.05■□□□□ 0.32
SSH3-210ENST00000532881 TEX33O43247 280 aa17.05■□□□□ 0.32
SSH3-210ENST00000532881 ACTN4O43707 911 aaKnown RBP17.05■□□□□ 0.32
SSH3-210ENST00000532881 CD44P16070 742 aaKnown RBP17.05■□□□□ 0.32
SSH3-210ENST00000532881 CPLX3Q8WVH0 158 aa17.05■□□□□ 0.32
SSH3-210ENST00000532881 FOXP1Q9H334 677 aaPredicted RBP17.05■□□□□ 0.32
SSH3-210ENST00000532881 AATFQ9NY61 560 aaKnown RBP eCLIP17.05■□□□□ 0.32
SSH3-210ENST00000532881 KDM4FA0A1W2PPD8 638 aa17.05■□□□□ 0.32
SSH3-210ENST00000532881 CDC25AP30304 524 aa17.05■□□□□ 0.32
SSH3-210ENST00000532881 RILPL1Q5EBL4 403 aa17.05■□□□□ 0.32
SSH3-210ENST00000532881 TRIM65Q6PJ69 517 aa17.05■□□□□ 0.32
SSH3-210ENST00000532881 TOGARAM2Q6ZUX3 1019 aa17.05■□□□□ 0.32
SSH3-210ENST00000532881 TMEM139Q8IV31 216 aa17.05■□□□□ 0.32
SSH3-210ENST00000532881 REXO1L1PQ8IX06 675 aa17.05■□□□□ 0.32
SSH3-210ENST00000532881 SMARCE1Q969G3 411 aa17.05■□□□□ 0.32
SSH3-210ENST00000532881 ZSCAN10Q96SZ4 725 aaPredicted RBP17.05■□□□□ 0.32
SSH3-210ENST00000532881 IFIT1BQ5T764 474 aaKnown RBP17.04■□□□□ 0.32
SSH3-210ENST00000532881 WASF1Q92558 559 aa17.04■□□□□ 0.32
SSH3-210ENST00000532881 FAM84BQ96KN1 310 aaPredicted RBP17.04■□□□□ 0.32
SSH3-210ENST00000532881 IRX2Q9BZI1 471 aaPredicted RBP17.04■□□□□ 0.32
SSH3-210ENST00000532881 LRP5O75197 1615 aa17.04■□□□□ 0.32
SSH3-210ENST00000532881 NHSL1Q5SYE7 1610 aa17.04■□□□□ 0.32
SSH3-210ENST00000532881 GNAT2P19087 354 aa17.04■□□□□ 0.32
SSH3-210ENST00000532881 ESR2Q92731 530 aa17.04■□□□□ 0.32
SSH3-210ENST00000532881 BLZF1Q9H2G9 400 aa17.04■□□□□ 0.32
SSH3-210ENST00000532881 ZNF446Q9NWS9 450 aa17.04■□□□□ 0.32
SSH3-210ENST00000532881 DOCK2Q92608 1830 aa17.03■□□□□ 0.32
SSH3-210ENST00000532881 PRDX5P30044 214 aa17.03■□□□□ 0.32
SSH3-210ENST00000532881 CTR9Q6PD62 1173 aa17.03■□□□□ 0.32
SSH3-210ENST00000532881 TXNRD3Q86VQ6 643 aa17.03■□□□□ 0.32
SSH3-210ENST00000532881 ANKRD18AQ8IVF6 992 aa17.03■□□□□ 0.32
SSH3-210ENST00000532881 SYMPKQ92797 1274 aaKnown RBP17.03■□□□□ 0.32
SSH3-210ENST00000532881 CGNQ9P2M7 1197 aaKnown RBP17.03■□□□□ 0.32
SSH3-210ENST00000532881 MINPP1Q9UNW1 487 aa17.03■□□□□ 0.32
SSH3-210ENST00000532881 SRPRBQ9Y5M8 271 aaKnown RBP17.03■□□□□ 0.32
SSH3-210ENST00000532881 CICQ96RK0 1608 aaPredicted RBP17.03■□□□□ 0.32
SSH3-210ENST00000532881 URI1O94763 535 aaPredicted RBP17.03■□□□□ 0.32
SSH3-210ENST00000532881 GTF2E1P29083 439 aaPredicted RBP17.03■□□□□ 0.32
SSH3-210ENST00000532881 SARSP49591 514 aaKnown RBP17.03■□□□□ 0.32
SSH3-210ENST00000532881 AKAP17AQ02040 695 aaKnown RBP17.03■□□□□ 0.32
SSH3-210ENST00000532881 FUT2Q10981 343 aa17.03■□□□□ 0.32
SSH3-210ENST00000532881 MORC3Q14149 939 aa17.03■□□□□ 0.32
SSH3-210ENST00000532881 CREBRFQ8IUR6 639 aa17.03■□□□□ 0.32
SSH3-210ENST00000532881 ERO1AQ96HE7 468 aa17.03■□□□□ 0.32
SSH3-210ENST00000532881 PSDA5PKW4 1024 aaPredicted RBP17.02■□□□□ 0.32
SSH3-210ENST00000532881 VWA3AA6NCI4 1184 aa17.02■□□□□ 0.32
SSH3-210ENST00000532881 FAM182BQ5T319 152 aa17.02■□□□□ 0.32
SSH3-210ENST00000532881 DDX41Q9UJV9 622 aaKnown RBP17.02■□□□□ 0.32
SSH3-210ENST00000532881 KARSQ15046 597 aaKnown RBP17.02■□□□□ 0.31
SSH3-210ENST00000532881 TC2NQ8N9U0 490 aa17.02■□□□□ 0.31
SSH3-210ENST00000532881 LINC00116Q8NCU8 138 aa17.02■□□□□ 0.31
SSH3-210ENST00000532881 WDR24Q96S15 920 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms