RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 NSMFQ6X4W1 530 aa9.79□□□□□ -0.84
CTNND1-232ENST00000532649 CSADQ9Y600 493 aa9.79□□□□□ -0.84
CTNND1-232ENST00000532649 PALLDQ8WX93 1383 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 BICDL2A1A5D9 508 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 CLGNO14967 610 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 EEF2P13639 858 aaKnown RBP9.78□□□□□ -0.84
CTNND1-232ENST00000532649 GJC1P36383 396 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 BTDP43251 543 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 CCDC89Q8N998 374 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 FAM200AQ8TCP9 573 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 NOD1Q9Y239 953 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 KDM2BQ8NHM5 1336 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 SV2BQ7L1I2 683 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 DIS3L2Q8IYB7 885 aaKnown RBP9.78□□□□□ -0.84
CTNND1-232ENST00000532649 STMN4Q9H169 189 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-232ENST00000532649 AFF2P51816 1311 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 GLI2P10070 1586 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 PHKA1P46020 1223 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 KIFC2Q96AC6 838 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 ADGRB3O60242 1522 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 A0A1B0GVL5 298 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 CFAP157Q5JU67 520 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 OTUD7BQ6GQQ9 843 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 SEC31BQ9NQW1 1179 aa9.78□□□□□ -0.84
CTNND1-232ENST00000532649 ABCA9Q8IUA7 1624 aa9.77□□□□□ -0.84
CTNND1-232ENST00000532649 A0A0D9SFI3 127 aa9.77□□□□□ -0.84
CTNND1-232ENST00000532649 hCG_1642624A0A1W2PR95 340 aa9.77□□□□□ -0.84
CTNND1-232ENST00000532649 CFBP00751 764 aa9.77□□□□□ -0.84
CTNND1-232ENST00000532649 TXKP42681 527 aa9.77□□□□□ -0.84
CTNND1-232ENST00000532649 ATL3Q6DD88 541 aa9.77□□□□□ -0.84
CTNND1-232ENST00000532649 CCDC50Q8IVM0 306 aa9.77□□□□□ -0.84
CTNND1-232ENST00000532649 IFNL3Q8IZI9 196 aa9.77□□□□□ -0.84
CTNND1-232ENST00000532649 EHBP1Q8NDI1 1231 aa9.77□□□□□ -0.84
CTNND1-232ENST00000532649 SEC62Q99442 399 aaKnown RBP9.77□□□□□ -0.84
CTNND1-232ENST00000532649 LZTS2Q9BRK4 669 aa9.77□□□□□ -0.84
CTNND1-232ENST00000532649 SELENOOQ9BVL4 669 aa9.77□□□□□ -0.84
CTNND1-232ENST00000532649 CEP152O94986 1710 aa9.77□□□□□ -0.84
CTNND1-232ENST00000532649 ATP2A2P16615 1042 aaKnown RBP9.77□□□□□ -0.85
CTNND1-232ENST00000532649 ADORA1P30542 326 aa9.77□□□□□ -0.85
CTNND1-232ENST00000532649 RSPH3Q86UC2 560 aa9.77□□□□□ -0.85
CTNND1-232ENST00000532649 CCDC65Q8IXS2 484 aa9.77□□□□□ -0.85
CTNND1-232ENST00000532649 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-232ENST00000532649 SRP68Q9UHB9 627 aaKnown RBP9.77□□□□□ -0.85
CTNND1-232ENST00000532649 DDX39AO00148 427 aaKnown RBP9.77□□□□□ -0.85
CTNND1-232ENST00000532649 NOP56O00567 594 aaKnown RBP9.77□□□□□ -0.85
CTNND1-232ENST00000532649 PLCD1P51178 756 aa9.77□□□□□ -0.85
CTNND1-232ENST00000532649 SMCR8Q8TEV9 937 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-232ENST00000532649 MAK16Q9BXY0 300 aaKnown RBP9.77□□□□□ -0.85
CTNND1-232ENST00000532649 COPRSQ9NQ92 184 aa9.77□□□□□ -0.85
CTNND1-232ENST00000532649 RRP9O43818 475 aaKnown RBP9.77□□□□□ -0.85
CTNND1-232ENST00000532649 TYRO3Q06418 890 aa9.77□□□□□ -0.85
CTNND1-232ENST00000532649 PPP2R5BQ15173 497 aa9.77□□□□□ -0.85
CTNND1-232ENST00000532649 HAUS3Q68CZ6 603 aa9.77□□□□□ -0.85
CTNND1-232ENST00000532649 JADE2Q9NQC1 790 aa9.77□□□□□ -0.85
CTNND1-232ENST00000532649 CEP83Q9Y592 693 aa9.77□□□□□ -0.85
CTNND1-232ENST00000532649 ELP1O95163 1332 aa9.77□□□□□ -0.85
CTNND1-232ENST00000532649 CDC42BPBQ9Y5S2 1711 aa9.77□□□□□ -0.85
CTNND1-232ENST00000532649 ARID5AQ03989 594 aa9.77□□□□□ -0.85
CTNND1-232ENST00000532649 NONOQ15233 471 aaKnown RBP eCLIP9.77□□□□□ -0.85
CTNND1-232ENST00000532649 BRDTQ58F21 947 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-232ENST00000532649 ANO1Q5XXA6 986 aa9.77□□□□□ -0.85
CTNND1-232ENST00000532649 FNBP4Q8N3X1 1017 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-232ENST00000532649 LEMD3Q9Y2U8 911 aa9.77□□□□□ -0.85
CTNND1-232ENST00000532649 UNC13BO14795 1591 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 GOLGA6L9A6NEM1 432 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 SEPT6Q14141 434 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 TTC38Q5R3I4 469 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 NCAPH2Q6IBW4 605 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 NLRP10Q86W26 655 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 AS3MTQ9HBK9 375 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 GPHNQ9NQX3 736 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-232ENST00000532649 CIAO1O76071 339 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 HSPA4P34932 840 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 CYLC1P35663 651 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-232ENST00000532649 TMEM110-MUSTN1A8MSY1 372 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 ARID4AP29374 1257 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-232ENST00000532649 SNW1Q13573 536 aaKnown RBP9.76□□□□□ -0.85
CTNND1-232ENST00000532649 KRT25Q7Z3Z0 450 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 PROCA1Q8NCQ7 364 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-232ENST00000532649 GOLGA1Q92805 767 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 DCPSQ96C86 337 aaKnown RBP9.76□□□□□ -0.85
CTNND1-232ENST00000532649 UIMC1Q96RL1 719 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 ATF5Q9Y2D1 282 aaPredicted RBP9.76□□□□□ -0.85
CTNND1-232ENST00000532649 TNS3Q68CZ2 1445 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 HARSP12081 509 aaKnown RBP9.76□□□□□ -0.85
CTNND1-232ENST00000532649 ALDH3A1P30838 453 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 GABPAQ06546 454 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 RNF34Q969K3 372 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 SETD1BQ9UPS6 1966 aaKnown RBP9.76□□□□□ -0.85
CTNND1-232ENST00000532649 TTC36A6NLP5 189 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 ERVV-1B6SEH8 477 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 VIMP08670 466 aaKnown RBP9.76□□□□□ -0.85
CTNND1-232ENST00000532649 PTGS1P23219 599 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 DCAF15Q66K64 600 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 KCNJ14Q9UNX9 436 aa9.76□□□□□ -0.85
CTNND1-232ENST00000532649 CCDC169A6NNP5 214 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 DTNBO60941 627 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 SULF1Q8IWU6 871 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 ZNF654Q8IZM8 581 aa9.75□□□□□ -0.85
CTNND1-232ENST00000532649 AXIN2Q9Y2T1 843 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms