RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-209ENST00000532347 UBP1Q9NZI7 540 aa11.4□□□□□ -0.58
KNL1-209ENST00000532347 PCDHA4Q9UN74 947 aa11.4□□□□□ -0.58
KNL1-209ENST00000532347 LRRIQ1Q96JM4 1722 aa11.4□□□□□ -0.58
KNL1-209ENST00000532347 APBA3O96018 575 aa11.39□□□□□ -0.59
KNL1-209ENST00000532347 CRKP46108 304 aa11.39□□□□□ -0.59
KNL1-209ENST00000532347 HNRNPUQ00839 825 aaKnown RBP eCLIP11.39□□□□□ -0.59
KNL1-209ENST00000532347 PTPRKQ15262 1439 aa11.39□□□□□ -0.59
KNL1-209ENST00000532347 NUTM2GQ5VZR2 741 aa11.39□□□□□ -0.59
KNL1-209ENST00000532347 ALYREFQ86V81 257 aaKnown RBP11.39□□□□□ -0.59
KNL1-209ENST00000532347 FBXO27Q8NI29 283 aa11.39□□□□□ -0.59
KNL1-209ENST00000532347 NACC1Q96RE7 527 aa11.39□□□□□ -0.59
KNL1-209ENST00000532347 NT5C1AQ9BXI3 368 aa11.39□□□□□ -0.59
KNL1-209ENST00000532347 RAD18Q9NS91 495 aa11.39□□□□□ -0.59
KNL1-209ENST00000532347 ADGBQ8N7X0 1667 aa11.39□□□□□ -0.59
KNL1-209ENST00000532347 A2ML1A8K2U0 1454 aa11.38□□□□□ -0.59
KNL1-209ENST00000532347 A2MP01023 1474 aa11.38□□□□□ -0.59
KNL1-209ENST00000532347 SPAG9O60271 1321 aaKnown RBP11.38□□□□□ -0.59
KNL1-209ENST00000532347 RTEL1-TNFRSF6BF6WH68 1400 aa11.38□□□□□ -0.59
KNL1-209ENST00000532347 CILPO75339 1184 aa11.38□□□□□ -0.59
KNL1-209ENST00000532347 ALX3O95076 343 aa11.38□□□□□ -0.59
KNL1-209ENST00000532347 GJA8P48165 433 aa11.38□□□□□ -0.59
KNL1-209ENST00000532347 AKTIPQ9H8T0 292 aa11.38□□□□□ -0.59
KNL1-209ENST00000532347 GPATCH8Q9UKJ3 1502 aaKnown RBP11.37□□□□□ -0.59
KNL1-209ENST00000532347 C9orf172C9J069 976 aa11.37□□□□□ -0.59
KNL1-209ENST00000532347 RNF225M0QZC1 329 aaPredicted RBP11.37□□□□□ -0.59
KNL1-209ENST00000532347 SLFN14P0C7P3 912 aa11.37□□□□□ -0.59
KNL1-209ENST00000532347 CDK8P49336 464 aa11.37□□□□□ -0.59
KNL1-209ENST00000532347 NRG1Q02297 640 aaPredicted RBP11.37□□□□□ -0.59
KNL1-209ENST00000532347 SMG8Q8ND04 991 aaKnown RBP11.37□□□□□ -0.59
KNL1-209ENST00000532347 GPRASP2Q96D09 838 aa11.37□□□□□ -0.59
KNL1-209ENST00000532347 SUGCTQ9HAC7 445 aa11.37□□□□□ -0.59
KNL1-209ENST00000532347 PCDHGC5Q9Y5F6 944 aa11.37□□□□□ -0.59
KNL1-209ENST00000532347 SYNGAP1Q96PV0 1343 aa11.36□□□□□ -0.59
KNL1-209ENST00000532347 SYCP2Q9BX26 1530 aa11.36□□□□□ -0.59
KNL1-209ENST00000532347 SUPT6HQ7KZ85 1726 aaKnown RBP11.36□□□□□ -0.59
KNL1-209ENST00000532347 TLR3O15455 904 aaKnown RBP11.36□□□□□ -0.59
KNL1-209ENST00000532347 APOBRQ0VD83 1088 aa11.36□□□□□ -0.59
KNL1-209ENST00000532347 INPP5AQ14642 412 aa11.36□□□□□ -0.59
KNL1-209ENST00000532347 AKAP4Q5JQC9 854 aa11.36□□□□□ -0.59
KNL1-209ENST00000532347 CYP4F12Q9HCS2 524 aa11.36□□□□□ -0.59
KNL1-209ENST00000532347 ROBO2Q9HCK4 1378 aa11.36□□□□□ -0.59
KNL1-209ENST00000532347 BPNT1O95861 308 aa11.35□□□□□ -0.59
KNL1-209ENST00000532347 RPL6Q02878 288 aaKnown RBP11.35□□□□□ -0.59
KNL1-209ENST00000532347 GNL2Q13823 731 aaKnown RBP11.35□□□□□ -0.59
KNL1-209ENST00000532347 MPP2Q14168 576 aa11.35□□□□□ -0.59
KNL1-209ENST00000532347 ZC3H12AQ5D1E8 599 aaKnown RBP11.35□□□□□ -0.59
KNL1-209ENST00000532347 DIEXFQ68CQ4 756 aaKnown RBP11.35□□□□□ -0.59
KNL1-209ENST00000532347 LRFN4Q6PJG9 635 aa11.35□□□□□ -0.59
KNL1-209ENST00000532347 PLPPR2Q96GM1 343 aa11.35□□□□□ -0.59
KNL1-209ENST00000532347 LRRC3Q9BY71 257 aa11.35□□□□□ -0.59
KNL1-209ENST00000532347 PPP1R9AQ9ULJ8 1098 aa11.35□□□□□ -0.59
KNL1-209ENST00000532347 CLTCQ00610 1675 aaKnown RBP11.34□□□□□ -0.59
KNL1-209ENST00000532347 KRBA1A5PL33 1030 aa11.34□□□□□ -0.59
KNL1-209ENST00000532347 TOM1O60784 492 aa11.34□□□□□ -0.59
KNL1-209ENST00000532347 MBTPS1Q14703 1052 aa11.34□□□□□ -0.59
KNL1-209ENST00000532347 WIPI1Q5MNZ9 446 aaPredicted RBP11.34□□□□□ -0.59
KNL1-209ENST00000532347 RASGRP4Q8TDF6 673 aa11.34□□□□□ -0.59
KNL1-209ENST00000532347 POLR1AO95602 1720 aaPredicted RBP11.33□□□□□ -0.6
KNL1-209ENST00000532347 DCDC2CA8MYV0 355 aa11.33□□□□□ -0.6
KNL1-209ENST00000532347 TIAF1O95411 115 aa11.33□□□□□ -0.6
KNL1-209ENST00000532347 ADH5P11766 374 aa11.33□□□□□ -0.6
KNL1-209ENST00000532347 DRD2P14416 443 aa11.33□□□□□ -0.6
KNL1-209ENST00000532347 NOS3P29474 1203 aa11.33□□□□□ -0.6
KNL1-209ENST00000532347 IREB2P48200 963 aaKnown RBP11.33□□□□□ -0.6
KNL1-209ENST00000532347 ID3Q02535 119 aa11.33□□□□□ -0.6
KNL1-209ENST00000532347 ADGRE1Q14246 886 aa11.33□□□□□ -0.6
KNL1-209ENST00000532347 ANKRD34AQ69YU3 496 aa11.33□□□□□ -0.6
KNL1-209ENST00000532347 FDX2Q6P4F2 183 aa11.33□□□□□ -0.6
KNL1-209ENST00000532347 Q6ZS46 218 aa11.33□□□□□ -0.6
KNL1-209ENST00000532347 C12orf50Q8NA57 414 aaPredicted RBP11.33□□□□□ -0.6
KNL1-209ENST00000532347 SLC43A3Q8NBI5 491 aa11.33□□□□□ -0.6
KNL1-209ENST00000532347 WFDC12Q8WWY7 111 aa11.33□□□□□ -0.6
KNL1-209ENST00000532347 DCAF5Q96JK2 942 aa11.33□□□□□ -0.6
KNL1-209ENST00000532347 DEPDC5O75140 1603 aa11.33□□□□□ -0.6
KNL1-209ENST00000532347 ZNF335Q9H4Z2 1342 aaPredicted RBP11.33□□□□□ -0.6
KNL1-209ENST00000532347 MED14O60244 1454 aa11.32□□□□□ -0.6
KNL1-209ENST00000532347 PZPP20742 1482 aa11.32□□□□□ -0.6
KNL1-209ENST00000532347 NLRP1Q9C000 1473 aa11.32□□□□□ -0.6
KNL1-209ENST00000532347 DNMT1P26358 1616 aaKnown RBP11.32□□□□□ -0.6
KNL1-209ENST00000532347 GFRA2O00451 464 aa11.32□□□□□ -0.6
KNL1-209ENST00000532347 TMPRSS2O15393 492 aa11.32□□□□□ -0.6
KNL1-209ENST00000532347 SOX4Q06945 474 aaPredicted RBP11.32□□□□□ -0.6
KNL1-209ENST00000532347 CWF19L2Q2TBE0 894 aaKnown RBP11.32□□□□□ -0.6
KNL1-209ENST00000532347 SEZ6Q53EL9 994 aa11.32□□□□□ -0.6
KNL1-209ENST00000532347 HDXQ7Z353 690 aa11.32□□□□□ -0.6
KNL1-209ENST00000532347 REC114Q7Z4M0 266 aa11.32□□□□□ -0.6
KNL1-209ENST00000532347 NKD1Q969G9 470 aa11.32□□□□□ -0.6
KNL1-209ENST00000532347 ELMO3Q96BJ8 720 aa11.32□□□□□ -0.6
KNL1-209ENST00000532347 AP4E1Q9UPM8 1137 aa11.32□□□□□ -0.6
KNL1-209ENST00000532347 CSADQ9Y600 493 aa11.32□□□□□ -0.6
KNL1-209ENST00000532347 SNCAIPQ9Y6H5 919 aa11.32□□□□□ -0.6
KNL1-209ENST00000532347 GLB1P16278 677 aa11.31□□□□□ -0.6
KNL1-209ENST00000532347 C12orf40Q86WS4 652 aa11.31□□□□□ -0.6
KNL1-209ENST00000532347 SLITRK4Q8IW52 837 aa11.31□□□□□ -0.6
KNL1-209ENST00000532347 SPATA32Q96LK8 384 aa11.31□□□□□ -0.6
KNL1-209ENST00000532347 CRIM1Q9NZV1 1036 aa11.31□□□□□ -0.6
KNL1-209ENST00000532347 SHANK2Q9UPX8 1470 aa11.31□□□□□ -0.6
KNL1-209ENST00000532347 KDM5DQ9BY66 1539 aa11.3□□□□□ -0.6
KNL1-209ENST00000532347 MED1Q15648 1581 aaPredicted RBP11.3□□□□□ -0.6
KNL1-209ENST00000532347 CHRNA4P43681 627 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms