RNA–Protein interactions for RNA: ENST00000532257.1

GEN1-205, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 4

Gene GEN1, Length 498 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-205ENST00000532257 GPRC5AQ8NFJ5 357 aa12.79□□□□□ -0.36
GEN1-205ENST00000532257 HERVK_113Q902F9 699 aa12.79□□□□□ -0.36
GEN1-205ENST00000532257 NKX2-4Q9H2Z4 354 aa12.79□□□□□ -0.36
GEN1-205ENST00000532257 CNNM1Q9NRU3 951 aa12.79□□□□□ -0.36
GEN1-205ENST00000532257 PRRC2BQ5JSZ5 2229 aaKnown RBP12.78□□□□□ -0.36
GEN1-205ENST00000532257 IRX3P78415 501 aaPredicted RBP12.78□□□□□ -0.36
GEN1-205ENST00000532257 SPP2Q13103 211 aa12.78□□□□□ -0.36
GEN1-205ENST00000532257 ANO1Q5XXA6 986 aa12.78□□□□□ -0.36
GEN1-205ENST00000532257 PLEKHH3Q7Z736 793 aa12.78□□□□□ -0.36
GEN1-205ENST00000532257 CCAR1Q8IX12 1150 aaKnown RBP12.78□□□□□ -0.36
GEN1-205ENST00000532257 KCNH6Q9H252 994 aa12.78□□□□□ -0.36
GEN1-205ENST00000532257 MBIPQ9NS73 344 aa12.78□□□□□ -0.36
GEN1-205ENST00000532257 A0A0G2JMZ2 1700 aa12.78□□□□□ -0.36
GEN1-205ENST00000532257 MAP2K5Q13163 448 aa12.77□□□□□ -0.37
GEN1-205ENST00000532257 RAB30Q15771 203 aa12.77□□□□□ -0.37
GEN1-205ENST00000532257 TAF7LQ5H9L4 462 aa12.77□□□□□ -0.37
GEN1-205ENST00000532257 FBXO33Q7Z6M2 555 aa12.77□□□□□ -0.37
GEN1-205ENST00000532257 MSRAQ9UJ68 235 aa12.77□□□□□ -0.37
GEN1-205ENST00000532257 TRIM35Q9UPQ4 493 aa12.77□□□□□ -0.37
GEN1-205ENST00000532257 SUGT1Q9Y2Z0 365 aa12.77□□□□□ -0.37
GEN1-205ENST00000532257 ZNF318Q5VUA4 2279 aa12.77□□□□□ -0.37
GEN1-205ENST00000532257 PQBP1O60828 265 aaKnown RBP12.76□□□□□ -0.37
GEN1-205ENST00000532257 CYBAP13498 195 aa12.76□□□□□ -0.37
GEN1-205ENST00000532257 CYP2C19P33261 490 aa12.76□□□□□ -0.37
GEN1-205ENST00000532257 HERVK_113P62684 666 aa12.76□□□□□ -0.37
GEN1-205ENST00000532257 ERVK-9P63128 1117 aa12.76□□□□□ -0.37
GEN1-205ENST00000532257 ERVK-24P63145 666 aa12.76□□□□□ -0.37
GEN1-205ENST00000532257 DIXDC1Q155Q3 683 aa12.76□□□□□ -0.37
GEN1-205ENST00000532257 CSPP1Q1MSJ5 1256 aa12.76□□□□□ -0.37
GEN1-205ENST00000532257 Q3C1V9 767 aa12.76□□□□□ -0.37
GEN1-205ENST00000532257 RASIP1Q5U651 963 aa12.76□□□□□ -0.37
GEN1-205ENST00000532257 SH3BP5LQ7L8J4 393 aa12.76□□□□□ -0.37
GEN1-205ENST00000532257 CCDC146Q8IYE0 955 aa12.76□□□□□ -0.37
GEN1-205ENST00000532257 ZNF280CQ8ND82 737 aa12.76□□□□□ -0.37
GEN1-205ENST00000532257 EDC3Q96F86 508 aaKnown RBP12.76□□□□□ -0.37
GEN1-205ENST00000532257 SLC28A3Q9HAS3 691 aa12.76□□□□□ -0.37
GEN1-205ENST00000532257 CWC22Q9HCG8 908 aaKnown RBP12.76□□□□□ -0.37
GEN1-205ENST00000532257 TMEM39AQ9NV64 488 aa12.76□□□□□ -0.37
GEN1-205ENST00000532257 COG5Q9UP83 839 aa12.76□□□□□ -0.37
GEN1-205ENST00000532257 YBX2Q9Y2T7 364 aaKnown RBP12.76□□□□□ -0.37
GEN1-205ENST00000532257 DCHS1Q96JQ0 3298 aa12.76□□□□□ -0.37
GEN1-205ENST00000532257 RGS3P49796 1198 aa12.75□□□□□ -0.37
GEN1-205ENST00000532257 FOXO4P98177 505 aa12.75□□□□□ -0.37
GEN1-205ENST00000532257 MAP3K10Q02779 954 aa12.75□□□□□ -0.37
GEN1-205ENST00000532257 TMEM240Q5SV17 173 aa12.75□□□□□ -0.37
GEN1-205ENST00000532257 ZSCAN29Q8IWY8 852 aaPredicted RBP12.75□□□□□ -0.37
GEN1-205ENST00000532257 USP40Q9NVE5 1235 aa12.75□□□□□ -0.37
GEN1-205ENST00000532257 NDUFB9Q9Y6M9 179 aa12.75□□□□□ -0.37
GEN1-205ENST00000532257 RFX7Q2KHR2 1363 aa12.74□□□□□ -0.37
GEN1-205ENST00000532257 DDTLA6NHG4 134 aaPredicted RBP12.74□□□□□ -0.37
GEN1-205ENST00000532257 ATP2B2Q01814 1243 aa12.74□□□□□ -0.37
GEN1-205ENST00000532257 LRRC41Q15345 812 aa12.74□□□□□ -0.37
GEN1-205ENST00000532257 POTEHQ6S545 545 aa12.74□□□□□ -0.37
GEN1-205ENST00000532257 C16orf59Q7L2K0 433 aa12.74□□□□□ -0.37
GEN1-205ENST00000532257 PAGR1Q9BTK6 254 aa12.74□□□□□ -0.37
GEN1-205ENST00000532257 RBPJLQ9UBG7 517 aa12.74□□□□□ -0.37
GEN1-205ENST00000532257 FAM196BA6NMK8 535 aa12.73□□□□□ -0.37
GEN1-205ENST00000532257 CCDC57Q2TAC2 916 aa12.73□□□□□ -0.37
GEN1-205ENST00000532257 CAVIN4Q5BKX8 364 aa12.73□□□□□ -0.37
GEN1-205ENST00000532257 SH3D19Q5HYK7 790 aa12.73□□□□□ -0.37
GEN1-205ENST00000532257 LMBR1LQ6UX01 489 aa12.73□□□□□ -0.37
GEN1-205ENST00000532257 SLC44A5Q8NCS7 719 aa12.73□□□□□ -0.37
GEN1-205ENST00000532257 NPLOC4Q8TAT6 608 aa12.73□□□□□ -0.37
GEN1-205ENST00000532257 MYH16Q9H6N6 1097 aa12.73□□□□□ -0.37
GEN1-205ENST00000532257 SPTBN4Q9H254 2564 aa12.72□□□□□ -0.37
GEN1-205ENST00000532257 ENTPD3O75355 529 aa12.72□□□□□ -0.37
GEN1-205ENST00000532257 FAAP100Q0VG06 881 aa12.72□□□□□ -0.37
GEN1-205ENST00000532257 PPIGQ13427 754 aaKnown RBP eCLIP12.72□□□□□ -0.373e-7■□□□□ 10.9
GEN1-205ENST00000532257 CCDC30Q5VVM6 783 aa12.72□□□□□ -0.37
GEN1-205ENST00000532257 PPP2R2DQ66LE6 453 aa12.72□□□□□ -0.37
GEN1-205ENST00000532257 CCDC174Q6PII3 467 aa12.72□□□□□ -0.37
GEN1-205ENST00000532257 ANKS1AQ92625 1134 aa12.72□□□□□ -0.37
GEN1-205ENST00000532257 HLA-CQ95604 372 aa12.72□□□□□ -0.37
GEN1-205ENST00000532257 MTCH2Q9Y6C9 303 aa12.72□□□□□ -0.37
GEN1-205ENST00000532257 MYH2Q9UKX2 1941 aa12.71□□□□□ -0.37
GEN1-205ENST00000532257 SEPT4O43236 478 aa12.71□□□□□ -0.37
GEN1-205ENST00000532257 TIMP1P01033 207 aa12.71□□□□□ -0.37
GEN1-205ENST00000532257 ACRP10323 421 aa12.71□□□□□ -0.37
GEN1-205ENST00000532257 HOXA7P31268 230 aaPredicted RBP12.71□□□□□ -0.37
GEN1-205ENST00000532257 MTMR2Q13614 643 aa12.71□□□□□ -0.37
GEN1-205ENST00000532257 FAM47AQ5JRC9 791 aa12.71□□□□□ -0.37
GEN1-205ENST00000532257 WDR78Q5VTH9 848 aa12.71□□□□□ -0.37
GEN1-205ENST00000532257 IDI2Q9BXS1 227 aa12.71□□□□□ -0.37
GEN1-205ENST00000532257 TBC1D2Q9BYX2 928 aa12.71□□□□□ -0.37
GEN1-205ENST00000532257 PUS3Q9BZE2 481 aaKnown RBP12.71□□□□□ -0.37
GEN1-205ENST00000532257 PHF24Q9UPV7 400 aa12.71□□□□□ -0.37
GEN1-205ENST00000532257 BRWD1Q9NSI6 2320 aa12.7□□□□□ -0.38
GEN1-205ENST00000532257 RFXAPO00287 272 aa12.7□□□□□ -0.38
GEN1-205ENST00000532257 GTPBP6O43824 516 aaPredicted RBP12.7□□□□□ -0.38
GEN1-205ENST00000532257 GLRX3O76003 335 aaKnown RBP12.7□□□□□ -0.38
GEN1-205ENST00000532257 HOXC6P09630 235 aa12.7□□□□□ -0.38
GEN1-205ENST00000532257 PRDX5P30044 214 aa12.7□□□□□ -0.38
GEN1-205ENST00000532257 EPHA10Q5JZY3 1008 aa12.7□□□□□ -0.38
GEN1-205ENST00000532257 KRT40Q6A162 431 aa12.7□□□□□ -0.38
GEN1-205ENST00000532257 MFSD5Q6N075 450 aa12.7□□□□□ -0.38
GEN1-205ENST00000532257 PSRC1Q6PGN9 363 aaPredicted RBP12.7□□□□□ -0.38
GEN1-205ENST00000532257 ZNF365Q70YC5 407 aa12.7□□□□□ -0.38
GEN1-205ENST00000532257 C8orf58Q8NAV2 365 aa12.7□□□□□ -0.38
GEN1-205ENST00000532257 OSBPL5Q9H0X9 879 aaPredicted RBP12.7□□□□□ -0.38
GEN1-205ENST00000532257 TRIOO75962 3097 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms