RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 DYNLL2Q96FJ2 89 aa24.83■■□□□ 1.57
CCS-207ENST00000531990 TBC1D2Q9BYX2 928 aa24.83■■□□□ 1.57
CCS-207ENST00000531990 HSPA1AP0DMV8 641 aaKnown RBP24.82■■□□□ 1.56
CCS-207ENST00000531990 HSPA1BP0DMV9 641 aaKnown RBP24.82■■□□□ 1.56
CCS-207ENST00000531990 EVX2Q03828 476 aa24.82■■□□□ 1.56
CCS-207ENST00000531990 BMP2KLQ5H9B9 411 aa24.82■■□□□ 1.56
CCS-207ENST00000531990 ZNF589Q86UQ0 364 aaPredicted RBP24.82■■□□□ 1.56
CCS-207ENST00000531990 CABP5Q9NP86 173 aa24.82■■□□□ 1.56
CCS-207ENST00000531990 CCL15-CCL14A0A0B4J2E2 113 aa24.81■■□□□ 1.56
CCS-207ENST00000531990 USP17L5A8MUK1 530 aa24.81■■□□□ 1.56
CCS-207ENST00000531990 CA12O43570 354 aa24.81■■□□□ 1.56
CCS-207ENST00000531990 SLC3A2P08195 630 aaKnown RBP24.81■■□□□ 1.56
CCS-207ENST00000531990 CETPP11597 493 aa24.81■■□□□ 1.56
CCS-207ENST00000531990 CCL15Q16663 113 aa24.81■■□□□ 1.56
CCS-207ENST00000531990 ABCB5Q2M3G0 1257 aa24.81■■□□□ 1.56
CCS-207ENST00000531990 C16orf86Q6ZW13 317 aa24.81■■□□□ 1.56
CCS-207ENST00000531990 AS3MTQ9HBK9 375 aa24.81■■□□□ 1.56
CCS-207ENST00000531990 ZBTB21Q9ULJ3 1066 aa24.81■■□□□ 1.56
CCS-207ENST00000531990 PHIPQ8WWQ0 1821 aa24.8■■□□□ 1.56
CCS-207ENST00000531990 CXCL11O14625 94 aa24.8■■□□□ 1.56
CCS-207ENST00000531990 CHMLP26374 656 aa24.8■■□□□ 1.56
CCS-207ENST00000531990 CDK8P49336 464 aa24.8■■□□□ 1.56
CCS-207ENST00000531990 VPS53Q5VIR6 699 aa24.8■■□□□ 1.56
CCS-207ENST00000531990 OTUD7BQ6GQQ9 843 aa24.8■■□□□ 1.56
CCS-207ENST00000531990 SLC44A5Q8NCS7 719 aa24.8■■□□□ 1.56
CCS-207ENST00000531990 MS4A4AQ96JQ5 239 aa24.8■■□□□ 1.56
CCS-207ENST00000531990 ZNF287Q9HBT7 754 aa24.8■■□□□ 1.56
CCS-207ENST00000531990 KCNH4Q9UQ05 1017 aa24.8■■□□□ 1.56
CCS-207ENST00000531990 RAD50Q92878 1312 aa24.8■■□□□ 1.56
CCS-207ENST00000531990 GH2P01242 217 aa24.79■■□□□ 1.56
CCS-207ENST00000531990 HSPD1P10809 573 aaKnown RBP24.79■■□□□ 1.56
CCS-207ENST00000531990 ALX1Q15699 326 aa24.79■■□□□ 1.56
CCS-207ENST00000531990 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.79■■□□□ 1.56
CCS-207ENST00000531990 AFG3L2Q9Y4W6 797 aa24.79■■□□□ 1.56
CCS-207ENST00000531990 ROBO3Q96MS0 1386 aa24.79■■□□□ 1.56
CCS-207ENST00000531990 TESPA1A2RU30 521 aaPredicted RBP24.78■■□□□ 1.56
CCS-207ENST00000531990 MPHOSPH10O00566 681 aaKnown RBP24.78■■□□□ 1.56
CCS-207ENST00000531990 ALDH1A1P00352 501 aa24.78■■□□□ 1.56
CCS-207ENST00000531990 CCDC84Q86UT8 332 aaPredicted RBP24.78■■□□□ 1.56
CCS-207ENST00000531990 IFNL1Q8IU54 200 aa24.78■■□□□ 1.56
CCS-207ENST00000531990 CCDC17Q96LX7 622 aa24.78■■□□□ 1.56
CCS-207ENST00000531990 SAGE1Q9NXZ1 904 aa24.78■■□□□ 1.56
CCS-207ENST00000531990 TRIM75PA6NK02 468 aa24.77■■□□□ 1.56
CCS-207ENST00000531990 SMIM22K7EJ46 135 aa24.77■■□□□ 1.56
CCS-207ENST00000531990 FOXP2O15409 715 aa24.77■■□□□ 1.56
CCS-207ENST00000531990 PPARAQ07869 468 aa24.77■■□□□ 1.56
CCS-207ENST00000531990 STK11IPQ8N1F8 1099 aa24.77■■□□□ 1.56
CCS-207ENST00000531990 ZNF280CQ8ND82 737 aa24.77■■□□□ 1.56
CCS-207ENST00000531990 BRI3BPQ8WY22 251 aa24.77■■□□□ 1.56
CCS-207ENST00000531990 MKNK2Q9HBH9 465 aa24.77■■□□□ 1.56
CCS-207ENST00000531990 RNF186Q9NXI6 227 aa24.77■■□□□ 1.56
CCS-207ENST00000531990 ZMYM6O95789 1325 aa24.77■■□□□ 1.56
CCS-207ENST00000531990 TRPA1O75762 1119 aa24.76■■□□□ 1.55
CCS-207ENST00000531990 FGAP02671 866 aa24.76■■□□□ 1.55
CCS-207ENST00000531990 JAG1P78504 1218 aa24.76■■□□□ 1.55
CCS-207ENST00000531990 PDE4BQ07343 736 aa24.76■■□□□ 1.55
CCS-207ENST00000531990 RAB3GAP1Q15042 981 aa24.76■■□□□ 1.55
CCS-207ENST00000531990 WDR18Q9BV38 432 aa24.76■■□□□ 1.55
CCS-207ENST00000531990 PTPRFP10586 1907 aa24.75■■□□□ 1.55
CCS-207ENST00000531990 CTCFP49711 727 aaPredicted RBP24.75■■□□□ 1.55
CCS-207ENST00000531990 SPP2Q13103 211 aa24.75■■□□□ 1.55
CCS-207ENST00000531990 SHROOM1Q2M3G4 852 aaPredicted RBP24.75■■□□□ 1.55
CCS-207ENST00000531990 FASTKD5Q7L8L6 764 aaKnown RBP24.75■■□□□ 1.55
CCS-207ENST00000531990 A0A0G2JLL6 359 aaPredicted RBP24.74■■□□□ 1.55
CCS-207ENST00000531990 IGF2BP3O00425 579 aaKnown RBP eCLIP24.74■■□□□ 1.55
CCS-207ENST00000531990 FOXN1O15353 648 aa24.74■■□□□ 1.55
CCS-207ENST00000531990 TMEM179Q6ZVK1 233 aa24.74■■□□□ 1.55
CCS-207ENST00000531990 PRRT2Q7Z6L0 340 aaPredicted RBP24.74■■□□□ 1.55
CCS-207ENST00000531990 DSCC1Q9BVC3 393 aa24.74■■□□□ 1.55
CCS-207ENST00000531990 CASC1Q6TDU7 716 aa24.73■■□□□ 1.55
CCS-207ENST00000531990 ZNF444Q8N0Y2 327 aaPredicted RBP24.73■■□□□ 1.55
CCS-207ENST00000531990 PTPN18Q99952 460 aa24.73■■□□□ 1.55
CCS-207ENST00000531990 AKR1B1P15121 316 aa24.72■■□□□ 1.55
CCS-207ENST00000531990 GADL1Q6ZQY3 521 aa24.72■■□□□ 1.55
CCS-207ENST00000531990 ZCCHC17Q9NP64 241 aaKnown RBP24.72■■□□□ 1.55
CCS-207ENST00000531990 CTNNA3Q9UI47 895 aa24.72■■□□□ 1.55
CCS-207ENST00000531990 ANAPC4Q9UJX5 808 aa24.72■■□□□ 1.55
CCS-207ENST00000531990 USP17L10C9JJH3 530 aa24.71■■□□□ 1.55
CCS-207ENST00000531990 SGSM2O43147 1006 aa24.71■■□□□ 1.55
CCS-207ENST00000531990 CTDSPL2Q05D32 466 aa24.71■■□□□ 1.55
CCS-207ENST00000531990 SEPT2Q15019 361 aa24.71■■□□□ 1.55
CCS-207ENST00000531990 ANKRD23Q86SG2 305 aa24.71■■□□□ 1.55
CCS-207ENST00000531990 FEZ1Q99689 392 aa24.71■■□□□ 1.55
CCS-207ENST00000531990 TSKSQ9UJT2 592 aa24.71■■□□□ 1.55
CCS-207ENST00000531990 C19orf81C9J6K1 198 aa24.7■■□□□ 1.54
CCS-207ENST00000531990 BTBD19C9JJ37 291 aa24.7■■□□□ 1.54
CCS-207ENST00000531990 PRDM1O75626 825 aa24.7■■□□□ 1.54
CCS-207ENST00000531990 RASA1P20936 1047 aa24.7■■□□□ 1.54
CCS-207ENST00000531990 HMGCS2P54868 508 aa24.7■■□□□ 1.54
CCS-207ENST00000531990 BACE1P56817 501 aa24.7■■□□□ 1.54
CCS-207ENST00000531990 MTMR2Q13614 643 aa24.7■■□□□ 1.54
CCS-207ENST00000531990 FAM43AQ8N2R8 423 aa24.7■■□□□ 1.54
CCS-207ENST00000531990 IL25Q9H293 177 aa24.7■■□□□ 1.54
CCS-207ENST00000531990 TMOD4Q9NZQ9 345 aa24.7■■□□□ 1.54
CCS-207ENST00000531990 CDC45O75419 566 aa24.69■■□□□ 1.54
CCS-207ENST00000531990 HSPA8P11142 646 aaKnown RBP24.69■■□□□ 1.54
CCS-207ENST00000531990 GUCY1A2P33402 732 aa24.69■■□□□ 1.54
CCS-207ENST00000531990 TAF1CQ15572 869 aaPredicted RBP24.69■■□□□ 1.54
CCS-207ENST00000531990 KIAA1211Q6ZU35 1233 aa24.69■■□□□ 1.54
CCS-207ENST00000531990 PROCA1Q8NCQ7 364 aaPredicted RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms