RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 LILRB2Q8N423 598 aa4.4□□□□□ -1.71
CD44-234ENST00000531873 SH3TC2Q8TF17 1288 aa4.4□□□□□ -1.71
CD44-234ENST00000531873 TMEM40Q8WWA1 233 aa4.4□□□□□ -1.71
CD44-234ENST00000531873 ACSBG1Q96GR2 724 aa4.4□□□□□ -1.71
CD44-234ENST00000531873 GPATCH3Q96I76 525 aa4.4□□□□□ -1.71
CD44-234ENST00000531873 REV1Q9UBZ9 1251 aa4.4□□□□□ -1.71
CD44-234ENST00000531873 LOC100289279A0A1B0GTE1 492 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 KIAA1324LA8MWY0 1029 aaPredicted RBP4.39□□□□□ -1.71
CD44-234ENST00000531873 PDPK1O15530 556 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 DEAF1O75398 565 aaPredicted RBP4.39□□□□□ -1.71
CD44-234ENST00000531873 LIG1P18858 919 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 NCLP19338 710 aaKnown RBP4.39□□□□□ -1.71
CD44-234ENST00000531873 GUCY2CP25092 1073 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 NLRP12P59046 1061 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 RING1Q06587 406 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 ZYXQ15942 572 aaKnown RBP4.39□□□□□ -1.71
CD44-234ENST00000531873 PLEKHG4Q58EX7 1191 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 FAM117BQ6P1L5 589 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 TTC6Q86TZ1 520 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 WFDC8Q8IUA0 241 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 DTWD1Q8N5C7 304 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 TAB3Q8N5C8 712 aaPredicted RBP4.39□□□□□ -1.71
CD44-234ENST00000531873 DNAJC7Q99615 494 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 TM9SF2Q99805 663 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 WDR18Q9BV38 432 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 USP26Q9BXU7 913 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 KCNK4Q9NYG8 393 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 GMIPQ9P107 970 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 SNCAIPQ9Y6H5 919 aa4.39□□□□□ -1.71
CD44-234ENST00000531873 OAS3Q9Y6K5 1087 aaKnown RBP4.39□□□□□ -1.71
CD44-234ENST00000531873 DCDC2CA8MYV0 355 aa4.38□□□□□ -1.71
CD44-234ENST00000531873 PPM1GO15355 546 aaPredicted RBP4.38□□□□□ -1.71
CD44-234ENST00000531873 DDX3YO15523 660 aaKnown RBP4.38□□□□□ -1.71
CD44-234ENST00000531873 NME1P15531 152 aaKnown RBP4.38□□□□□ -1.71
CD44-234ENST00000531873 FSTP19883 344 aa4.38□□□□□ -1.71
CD44-234ENST00000531873 NOS3P29474 1203 aa4.38□□□□□ -1.71
CD44-234ENST00000531873 SSTR4P31391 388 aa4.38□□□□□ -1.71
CD44-234ENST00000531873 NTF4P34130 210 aa4.38□□□□□ -1.71
CD44-234ENST00000531873 ARL4DP49703 201 aa4.38□□□□□ -1.71
CD44-234ENST00000531873 SQSTM1Q13501 440 aa4.38□□□□□ -1.71
CD44-234ENST00000531873 PDE3AQ14432 1141 aa4.38□□□□□ -1.71
CD44-234ENST00000531873 PPP2R5EQ16537 467 aa4.38□□□□□ -1.71
CD44-234ENST00000531873 FXNQ16595 210 aa4.38□□□□□ -1.71
CD44-234ENST00000531873 ZC3H12AQ5D1E8 599 aaKnown RBP4.38□□□□□ -1.71
CD44-234ENST00000531873 TMEM201Q5SNT2 666 aa4.38□□□□□ -1.71
CD44-234ENST00000531873 DIEXFQ68CQ4 756 aaKnown RBP4.38□□□□□ -1.71
CD44-234ENST00000531873 C6orf15Q6UXA7 325 aaPredicted RBP4.38□□□□□ -1.71
CD44-234ENST00000531873 HDXQ7Z353 690 aa4.38□□□□□ -1.71
CD44-234ENST00000531873 FBXO11Q86XK2 927 aa4.38□□□□□ -1.71
CD44-234ENST00000531873 KLHL23Q8NBE8 558 aa4.38□□□□□ -1.71
CD44-234ENST00000531873 ATG4CQ96DT6 458 aa4.38□□□□□ -1.71
CD44-234ENST00000531873 TACC3Q9Y6A5 838 aa4.38□□□□□ -1.71
CD44-234ENST00000531873 LTBP3Q9NS15 1303 aa4.38□□□□□ -1.71
CD44-234ENST00000531873 ESYT3A0FGR9 886 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 PRAMEF27A3QJZ7 478 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 SLC22A31A6NKX4 558 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 TNFRSF10CO14798 259 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 TMPRSS2O15393 492 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 EIF4EBP3O60516 100 aaPredicted RBP4.37□□□□□ -1.71
CD44-234ENST00000531873 DIAPH1O60610 1272 aaKnown RBP4.37□□□□□ -1.71
CD44-234ENST00000531873 AOC2O75106 756 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 PLCG1P19174 1290 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 IREB2P48200 963 aaKnown RBP4.37□□□□□ -1.71
CD44-234ENST00000531873 GP2P55259 537 aaKnown RBP4.37□□□□□ -1.71
CD44-234ENST00000531873 JAG1P78504 1218 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 LRRFIP1Q32MZ4 808 aaKnown RBP4.37□□□□□ -1.71
CD44-234ENST00000531873 UNC5AQ6ZN44 842 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 SPATC1Q76KD6 591 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 NLRC3Q7RTR2 1065 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 C12orf40Q86WS4 652 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 DMRTC2Q8IXT2 367 aaPredicted RBP4.37□□□□□ -1.71
CD44-234ENST00000531873 DZIP1LQ8IYY4 767 aaKnown RBP4.37□□□□□ -1.71
CD44-234ENST00000531873 JMYQ8N9B5 988 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 UBASH3BQ8TF42 649 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 ELMO3Q96BJ8 720 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 ACSF2Q96CM8 615 aaPredicted RBP4.37□□□□□ -1.71
CD44-234ENST00000531873 MEGF10Q96KG7 1140 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 CNNM2Q9H8M5 875 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 FANCLQ9NW38 375 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 TMEM260Q9NX78 707 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 HIF3AQ9Y2N7 669 aa4.37□□□□□ -1.71
CD44-234ENST00000531873 CDC45O75419 566 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 DDAH1O94760 285 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 WISP1O95388 367 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 CDK11BP21127 795 aaKnown RBP4.36□□□□□ -1.71
CD44-234ENST00000531873 POLR2BP30876 1174 aaKnown RBP4.36□□□□□ -1.71
CD44-234ENST00000531873 GRK4P32298 578 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 ERVK-24P63145 666 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 IFRD2Q12894 506 aaPredicted RBP4.36□□□□□ -1.71
CD44-234ENST00000531873 MTERF2Q49AM1 385 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 C2orf27AQ580R0 203 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 PPM1JQ5JR12 505 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 CDCP2Q5VXM1 449 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 IGF2-ASQ6U949 168 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 MAP4K3Q8IVH8 894 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 FAM178BQ8IXR5 827 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 ANKRD13AQ8IZ07 590 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 KLHL6Q8WZ60 621 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 SLC9A7Q96T83 725 aa4.36□□□□□ -1.71
CD44-234ENST00000531873 KLHL3Q9UH77 587 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms