RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 IPO5O00410 1097 aaKnown RBP5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 FSCN2O14926 492 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 KIF5CO60282 957 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 REC8O95072 547 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 USP17L7P0C7H9 530 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 RLBP1P12271 317 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 ELNP15502 786 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 ATP2B1P20020 1258 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 EPHA1P21709 976 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 FLT3P36888 993 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 ST13P50502 369 aaKnown RBP5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 RWDD2BP57060 319 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 PCDH1Q08174 1060 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 ADCY2Q08462 1091 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 C19orf57Q0VDD7 668 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 RASA3Q14644 834 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 TERF2Q15554 542 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 CCDC30Q5VVM6 783 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 VN1R5Q7Z5H4 357 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 FMR1NBQ8N0W7 255 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 CRELD1Q96HD1 420 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 ARPC5LQ9BPX5 153 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 MMTAG2Q9BU76 263 aaKnown RBP5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 VEZTQ9HBM0 779 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 POGKQ9P215 609 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 AKAP2Q9Y2D5 859 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 JRKLQ9Y4A0 524 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 COMMD10Q9Y6G5 202 aa5.67□□□□□ -1.5
ECHDC1-221ENST00000531582 A0A1B0GUL7 405 aa5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 BICDL2A1A5D9 508 aa5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 TMCO5BA8MYB1 307 aa5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 LINC01387J3KSC0 135 aa5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 HTATSF1O43719 755 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 SH3BP5O60239 455 aa5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 HMMRO75330 724 aa5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 B3GALT4O96024 378 aa5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 ESRRAP11474 423 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 TRPC1P48995 793 aa5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 HDLBPQ00341 1268 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 MRPL58Q14197 206 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 SUZ12Q15022 739 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 SPRED3Q2MJR0 410 aa5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 MAP9Q49MG5 647 aa5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 WWC2Q6AWC2 1192 aa5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 IGF2-ASQ6U949 168 aa5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 CCDC73Q6ZRK6 1079 aa5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 OTUD6AQ7L8S5 288 aa5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 EFCAB13Q8IY85 973 aa5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 ZNF396Q96N95 335 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 C22orf23Q9BZE7 217 aa5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 SH2B1Q9NRF2 756 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-221ENST00000531582 BAZ1BQ9UIG0 1483 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 METTL12A8MUP2 240 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 C9orf172C9J069 976 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 BAG4O95429 457 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 APBA3O96018 575 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 CYP11A1P05108 521 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 IMPDH2P12268 514 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 TAGLNQ01995 201 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 NRG1Q02297 640 aaPredicted RBP5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 ICA1Q05084 483 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 AP3B2Q13367 1082 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 BMS1Q14692 1282 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 TAF1CQ15572 869 aaPredicted RBP5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 ATP2B3Q16720 1220 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 AP1ARQ63HQ0 302 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 TTLL5Q6EMB2 1281 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 SV2BQ7L1I2 683 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 CATIPQ7Z7H3 387 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 C3orf58Q8NDZ4 430 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 ANKRD20A12PQ8NF67 263 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 PNISRQ8TF01 805 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 STAG1Q8WVM7 1258 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 C17orf50Q8WW18 174 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 TNPO1Q92973 898 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 SH3GL3Q99963 347 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 TMEM39AQ9NV64 488 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 CCDC39Q9UFE4 941 aa5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 TPX2Q9ULW0 747 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-221ENST00000531582 USP31Q70CQ4 1352 aa5.65□□□□□ -1.51
ECHDC1-221ENST00000531582 KIAA1107Q9UPP5 1409 aa5.65□□□□□ -1.51
ECHDC1-221ENST00000531582 ANKRD62A6NC57 917 aa5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 SOX1O00570 391 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 CREB3O43889 395 aa5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 KINO60870 393 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 CDKL5O76039 1030 aa5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 STK10O94804 968 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 SKILP12757 684 aa5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 NAT1P18440 290 aa5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 CD68P34810 354 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 MAP2K2P36507 400 aa5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 EIF5P55010 431 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 RAD51AP2Q09MP3 1159 aa5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 KCNMA1Q12791 1236 aa5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 IFT88Q13099 833 aa5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 TAF7Q15545 349 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 TSNAXIP1Q2TAA8 658 aa5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 SKOR2Q2VWA4 1001 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 SCARA3Q6AZY7 606 aa5.64□□□□□ -1.51
ECHDC1-221ENST00000531582 FILIP1Q7Z7B0 1213 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms