RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 UPF3BQ9BZI7 483 aaKnown RBP20.85■□□□□ 0.93
CTSB-222ENST00000531551 SSC5DA1L4H1 1573 aa20.85■□□□□ 0.93
CTSB-222ENST00000531551 AKR1B1P15121 316 aa20.84■□□□□ 0.93
CTSB-222ENST00000531551 MAP3K10Q02779 954 aa20.84■□□□□ 0.93
CTSB-222ENST00000531551 COL9A3Q14050 684 aaPredicted RBP20.84■□□□□ 0.93
CTSB-222ENST00000531551 BLOC1S2Q6QNY1 142 aa20.84■□□□□ 0.93
CTSB-222ENST00000531551 WRNIP1Q96S55 665 aa20.84■□□□□ 0.93
CTSB-222ENST00000531551 CELF2O95319 508 aaKnown RBP20.84■□□□□ 0.93
CTSB-222ENST00000531551 ITGBL1O95965 494 aaPredicted RBP20.84■□□□□ 0.93
CTSB-222ENST00000531551 RRP1BQ14684 758 aaKnown RBP20.84■□□□□ 0.93
CTSB-222ENST00000531551 TCEANC2Q96MN5 208 aa20.84■□□□□ 0.93
CTSB-222ENST00000531551 ZKSCAN3Q9BRR0 538 aa20.84■□□□□ 0.93
CTSB-222ENST00000531551 ZSWIM5Q9P217 1185 aa20.84■□□□□ 0.93
CTSB-222ENST00000531551 ANGEL1Q9UNK9 670 aaKnown RBP20.84■□□□□ 0.93
CTSB-222ENST00000531551 LAMA4Q16363 1823 aa20.83■□□□□ 0.93
CTSB-222ENST00000531551 USP2O75604 605 aaPredicted RBP20.83■□□□□ 0.92
CTSB-222ENST00000531551 ABCB5Q2M3G0 1257 aa20.83■□□□□ 0.92
CTSB-222ENST00000531551 SHROOM1Q2M3G4 852 aaPredicted RBP20.83■□□□□ 0.92
CTSB-222ENST00000531551 MOB2Q70IA6 237 aa20.83■□□□□ 0.92
CTSB-222ENST00000531551 CYB5R4Q7L1T6 521 aa20.83■□□□□ 0.92
CTSB-222ENST00000531551 TAOK2Q9UL54 1235 aa20.83■□□□□ 0.92
CTSB-222ENST00000531551 SIPA1L1O43166 1804 aa20.83■□□□□ 0.92
CTSB-222ENST00000531551 PHF20L1A8MW92 1017 aa20.82■□□□□ 0.92
CTSB-222ENST00000531551 HMGB1P09429 215 aaKnown RBP20.82■□□□□ 0.92
CTSB-222ENST00000531551 MCM5P33992 734 aa20.82■□□□□ 0.92
CTSB-222ENST00000531551 MB21D2Q8IYB1 491 aaPredicted RBP20.82■□□□□ 0.92
CTSB-222ENST00000531551 CCDC17Q96LX7 622 aa20.82■□□□□ 0.92
CTSB-222ENST00000531551 KIF2CQ99661 725 aa20.82■□□□□ 0.92
CTSB-222ENST00000531551 CABP5Q9NP86 173 aa20.82■□□□□ 0.92
CTSB-222ENST00000531551 CYP46A1Q9Y6A2 500 aa20.82■□□□□ 0.92
CTSB-222ENST00000531551 GH2P01242 217 aa20.81■□□□□ 0.92
CTSB-222ENST00000531551 INPP5BP32019 993 aa20.81■□□□□ 0.92
CTSB-222ENST00000531551 IREB2P48200 963 aaKnown RBP20.81■□□□□ 0.92
CTSB-222ENST00000531551 RBM46Q8TBY0 533 aaKnown RBP20.81■□□□□ 0.92
CTSB-222ENST00000531551 ZKSCAN4Q969J2 545 aaPredicted RBP20.81■□□□□ 0.92
CTSB-222ENST00000531551 KLRG1Q96E93 195 aa20.81■□□□□ 0.92
CTSB-222ENST00000531551 LRRC2Q9BYS8 371 aa20.81■□□□□ 0.92
CTSB-222ENST00000531551 TM6SF1Q9BZW5 370 aa20.81■□□□□ 0.92
CTSB-222ENST00000531551 ZSWIM6Q9HCJ5 1215 aa20.81■□□□□ 0.92
CTSB-222ENST00000531551 PRC1O43663 620 aa20.81■□□□□ 0.92
CTSB-222ENST00000531551 CAP2P40123 477 aa20.81■□□□□ 0.92
CTSB-222ENST00000531551 RAB3GAP1Q15042 981 aa20.81■□□□□ 0.92
CTSB-222ENST00000531551 RUFY3Q7L099 469 aa20.81■□□□□ 0.92
CTSB-222ENST00000531551 DHX32Q7L7V1 743 aaKnown RBP20.81■□□□□ 0.92
CTSB-222ENST00000531551 ARMC9Q7Z3E5 817 aa20.81■□□□□ 0.92
CTSB-222ENST00000531551 NMT2O60551 498 aa20.8■□□□□ 0.92
CTSB-222ENST00000531551 RPS6KB1P23443 525 aa20.8■□□□□ 0.92
CTSB-222ENST00000531551 NEK4P51957 841 aa20.8■□□□□ 0.92
CTSB-222ENST00000531551 FGD1P98174 961 aa20.8■□□□□ 0.92
CTSB-222ENST00000531551 IQCA1Q86XH1 822 aa20.8■□□□□ 0.92
CTSB-222ENST00000531551 UBAC1Q9BSL1 405 aa20.8■□□□□ 0.92
CTSB-222ENST00000531551 JAG1P78504 1218 aa20.79■□□□□ 0.92
CTSB-222ENST00000531551 NEDD1Q8NHV4 660 aa20.79■□□□□ 0.92
CTSB-222ENST00000531551 IFIT3O14879 490 aaKnown RBP20.79■□□□□ 0.92
CTSB-222ENST00000531551 CTNND1O60716 968 aaKnown RBP20.79■□□□□ 0.92
CTSB-222ENST00000531551 ANTXR2P58335 489 aa20.79■□□□□ 0.92
CTSB-222ENST00000531551 MAP3K9P80192 1104 aa20.79■□□□□ 0.92
CTSB-222ENST00000531551 C2orf69Q8N8R5 385 aa20.79■□□□□ 0.92
CTSB-222ENST00000531551 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.79■□□□□ 0.922e-23■□□□□ 11.3
CTSB-222ENST00000531551 IL17RAQ96F46 866 aa20.79■□□□□ 0.92
CTSB-222ENST00000531551 GBA2Q9HCG7 927 aaPredicted RBP20.79■□□□□ 0.92
CTSB-222ENST00000531551 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.79■□□□□ 0.92
CTSB-222ENST00000531551 ZNF112Q9UJU3 913 aa20.79■□□□□ 0.92
CTSB-222ENST00000531551 ZBTB21Q9ULJ3 1066 aa20.79■□□□□ 0.92
CTSB-222ENST00000531551 ERICH2A1L162 156 aa20.78■□□□□ 0.92
CTSB-222ENST00000531551 UBE2Q2LH0YL09 131 aa20.78■□□□□ 0.92
CTSB-222ENST00000531551 ATP2B2Q01814 1243 aa20.78■□□□□ 0.92
CTSB-222ENST00000531551 SEPT2Q15019 361 aa20.78■□□□□ 0.92
CTSB-222ENST00000531551 SART3Q15020 963 aaKnown RBP20.78■□□□□ 0.92
CTSB-222ENST00000531551 RABEP1Q15276 862 aa20.78■□□□□ 0.92
CTSB-222ENST00000531551 TMEM179Q6ZVK1 233 aa20.78■□□□□ 0.92
CTSB-222ENST00000531551 CLEC10AQ8IUN9 316 aa20.78■□□□□ 0.92
CTSB-222ENST00000531551 ZSCAN10Q96SZ4 725 aaPredicted RBP20.78■□□□□ 0.92
CTSB-222ENST00000531551 PDRG1Q9NUG6 133 aa20.78■□□□□ 0.92
CTSB-222ENST00000531551 NT5C2P49902 561 aa20.77■□□□□ 0.92
CTSB-222ENST00000531551 CST9Q5W186 159 aa20.77■□□□□ 0.92
CTSB-222ENST00000531551 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.77■□□□□ 0.92
CTSB-222ENST00000531551 PICK1Q9NRD5 415 aa20.77■□□□□ 0.92
CTSB-222ENST00000531551 IL17RBQ9NRM6 502 aa20.77■□□□□ 0.92
CTSB-222ENST00000531551 STX8Q9UNK0 236 aa20.77■□□□□ 0.92
CTSB-222ENST00000531551 CSADQ9Y600 493 aa20.77■□□□□ 0.92
CTSB-222ENST00000531551 TNKSO95271 1327 aa20.77■□□□□ 0.92
CTSB-222ENST00000531551 ASNSP08243 561 aa20.77■□□□□ 0.92
CTSB-222ENST00000531551 EXOSC10Q01780 885 aaKnown RBP20.77■□□□□ 0.92
CTSB-222ENST00000531551 TMEM67Q5HYA8 995 aa20.77■□□□□ 0.92
CTSB-222ENST00000531551 Q6ZUG5 572 aa20.77■□□□□ 0.92
CTSB-222ENST00000531551 CCDC84Q86UT8 332 aaPredicted RBP20.77■□□□□ 0.92
CTSB-222ENST00000531551 SCYL3Q8IZE3 742 aa20.77■□□□□ 0.92
CTSB-222ENST00000531551 CEP95Q96GE4 821 aa20.77■□□□□ 0.92
CTSB-222ENST00000531551 PASKQ96RG2 1323 aa20.76■□□□□ 0.91
CTSB-222ENST00000531551 VGLL4Q14135 290 aa20.76■□□□□ 0.91
CTSB-222ENST00000531551 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.76■□□□□ 0.91
CTSB-222ENST00000531551 ANKRD13AQ8IZ07 590 aa20.76■□□□□ 0.91
CTSB-222ENST00000531551 GPHNQ9NQX3 736 aaPredicted RBP20.76■□□□□ 0.91
CTSB-222ENST00000531551 GUCY1A2P33402 732 aa20.75■□□□□ 0.91
CTSB-222ENST00000531551 FSTL1Q12841 308 aa20.75■□□□□ 0.91
CTSB-222ENST00000531551 TMEM87BQ96K49 555 aa20.75■□□□□ 0.91
CTSB-222ENST00000531551 ICA1Q05084 483 aa20.75■□□□□ 0.91
CTSB-222ENST00000531551 WTAPQ15007 396 aa20.75■□□□□ 0.91
CTSB-222ENST00000531551 MAP3K11Q16584 847 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms