RNA–Protein interactions for RNA: ENST00000531336.1

SMPD1-206, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-206ENST00000531336 CTDSPL2Q05D32 466 aa16.47■□□□□ 0.23
SMPD1-206ENST00000531336 CERKLQ49MI3 558 aaPredicted RBP16.47■□□□□ 0.23
SMPD1-206ENST00000531336 TATDN1Q6P1N9 297 aa16.47■□□□□ 0.23
SMPD1-206ENST00000531336 CCDC84Q86UT8 332 aaPredicted RBP16.47■□□□□ 0.23
SMPD1-206ENST00000531336 PTPRFP10586 1907 aa16.47■□□□□ 0.23
SMPD1-206ENST00000531336 SLC3A2P08195 630 aaKnown RBP16.46■□□□□ 0.23
SMPD1-206ENST00000531336 HAND2P61296 217 aa16.46■□□□□ 0.23
SMPD1-206ENST00000531336 PTH1RQ03431 593 aa16.46■□□□□ 0.23
SMPD1-206ENST00000531336 SPRYD7Q5W111 196 aa16.46■□□□□ 0.23
SMPD1-206ENST00000531336 ERO1BQ86YB8 467 aa16.46■□□□□ 0.23
SMPD1-206ENST00000531336 DNAJC5GQ8N7S2 189 aa16.46■□□□□ 0.23
SMPD1-206ENST00000531336 ZBTB21Q9ULJ3 1066 aa16.46■□□□□ 0.23
SMPD1-206ENST00000531336 GREB1LQ9C091 1923 aaPredicted RBP16.45■□□□□ 0.22
SMPD1-206ENST00000531336 MPHOSPH10O00566 681 aaKnown RBP16.45■□□□□ 0.22
SMPD1-206ENST00000531336 GH2P01242 217 aa16.45■□□□□ 0.22
SMPD1-206ENST00000531336 PTPRAP18433 802 aa16.45■□□□□ 0.22
SMPD1-206ENST00000531336 JAG1P78504 1218 aa16.45■□□□□ 0.22
SMPD1-206ENST00000531336 NOGQ13253 232 aa16.45■□□□□ 0.22
SMPD1-206ENST00000531336 ABCB5Q2M3G0 1257 aa16.45■□□□□ 0.22
SMPD1-206ENST00000531336 KIAA1211Q6ZU35 1233 aa16.45■□□□□ 0.22
SMPD1-206ENST00000531336 ZIC5Q96T25 663 aa16.45■□□□□ 0.22
SMPD1-206ENST00000531336 MKNK2Q9HBH9 465 aa16.45■□□□□ 0.22
SMPD1-206ENST00000531336 TAOK2Q9UL54 1235 aa16.45■□□□□ 0.22
SMPD1-206ENST00000531336 PRDM1O75626 825 aa16.44■□□□□ 0.22
SMPD1-206ENST00000531336 ASNSP08243 561 aa16.44■□□□□ 0.22
SMPD1-206ENST00000531336 ZBTB48P10074 688 aaPredicted RBP16.44■□□□□ 0.22
SMPD1-206ENST00000531336 AKR1B1P15121 316 aa16.44■□□□□ 0.22
SMPD1-206ENST00000531336 PPIL2Q13356 520 aa16.44■□□□□ 0.22
SMPD1-206ENST00000531336 ANO2Q9NQ90 1003 aa16.44■□□□□ 0.22
SMPD1-206ENST00000531336 ANAPC4Q9UJX5 808 aa16.44■□□□□ 0.22
SMPD1-206ENST00000531336 KIF23Q02241 960 aaPredicted RBP16.43■□□□□ 0.22
SMPD1-206ENST00000531336 PPATQ06203 517 aa16.43■□□□□ 0.22
SMPD1-206ENST00000531336 PDE4BQ07343 736 aa16.43■□□□□ 0.22
SMPD1-206ENST00000531336 RAB3GAP1Q15042 981 aa16.43■□□□□ 0.22
SMPD1-206ENST00000531336 TBC1D10CQ8IV04 446 aa16.43■□□□□ 0.22
SMPD1-206ENST00000531336 ZNF287Q9HBT7 754 aa16.43■□□□□ 0.22
SMPD1-206ENST00000531336 CABP5Q9NP86 173 aa16.43■□□□□ 0.22
SMPD1-206ENST00000531336 CTNNA3Q9UI47 895 aa16.43■□□□□ 0.22
SMPD1-206ENST00000531336 ZHX2Q9Y6X8 837 aa16.43■□□□□ 0.22
SMPD1-206ENST00000531336 U3KPZ7 1027 aaPredicted RBP16.43■□□□□ 0.22
SMPD1-206ENST00000531336 USP17L5A8MUK1 530 aa16.42■□□□□ 0.22
SMPD1-206ENST00000531336 ZNF213O14771 459 aa16.42■□□□□ 0.22
SMPD1-206ENST00000531336 IRF6O14896 467 aa16.42■□□□□ 0.22
SMPD1-206ENST00000531336 RASA1P20936 1047 aa16.42■□□□□ 0.22
SMPD1-206ENST00000531336 IMMTQ16891 758 aaKnown RBP16.42■□□□□ 0.22
SMPD1-206ENST00000531336 LSG1Q9H089 658 aaKnown RBP16.42■□□□□ 0.22
SMPD1-206ENST00000531336 NBPF3Q9H094 633 aa16.42■□□□□ 0.22
SMPD1-206ENST00000531336 INCENPQ9NQS7 918 aa16.42■□□□□ 0.22
SMPD1-206ENST00000531336 TOMM22Q9NS69 142 aa16.42■□□□□ 0.22
SMPD1-206ENST00000531336 GINM1Q9NU53 330 aa16.42■□□□□ 0.22
SMPD1-206ENST00000531336 RBM8AQ9Y5S9 174 aaKnown RBP16.42■□□□□ 0.22
SMPD1-206ENST00000531336 TACC3Q9Y6A5 838 aa16.42■□□□□ 0.22
SMPD1-206ENST00000531336 CEP350Q5VT06 3117 aa16.41■□□□□ 0.22
SMPD1-206ENST00000531336 LOC285556D6RIA3 1793 aa16.41■□□□□ 0.22
SMPD1-206ENST00000531336 MYH4Q9Y623 1939 aa16.41■□□□□ 0.22
SMPD1-206ENST00000531336 TRIM75PA6NK02 468 aa16.41■□□□□ 0.22
SMPD1-206ENST00000531336 GUCY1A2P33402 732 aa16.41■□□□□ 0.22
SMPD1-206ENST00000531336 MAP2K2P36507 400 aa16.41■□□□□ 0.22
SMPD1-206ENST00000531336 SEPT2Q15019 361 aa16.41■□□□□ 0.22
SMPD1-206ENST00000531336 RRP12Q5JTH9 1297 aaKnown RBP16.41■□□□□ 0.22
SMPD1-206ENST00000531336 TMEM179Q6ZVK1 233 aa16.41■□□□□ 0.22
SMPD1-206ENST00000531336 CLEC10AQ8IUN9 316 aa16.41■□□□□ 0.22
SMPD1-206ENST00000531336 CCDC17Q96LX7 622 aa16.41■□□□□ 0.22
SMPD1-206ENST00000531336 AS3MTQ9HBK9 375 aa16.41■□□□□ 0.22
SMPD1-206ENST00000531336 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMPD1-206ENST00000531336 MANSC4A6NHS7 340 aaPredicted RBP16.4■□□□□ 0.22
SMPD1-206ENST00000531336 GTF2A2P52657 109 aa16.4■□□□□ 0.22
SMPD1-206ENST00000531336 SNAPC2Q13487 334 aa16.4■□□□□ 0.22
SMPD1-206ENST00000531336 AKNAD1Q5T1N1 836 aa16.4■□□□□ 0.22
SMPD1-206ENST00000531336 ZNF444Q8N0Y2 327 aaPredicted RBP16.4■□□□□ 0.22
SMPD1-206ENST00000531336 STAG1Q8WVM7 1258 aa16.4■□□□□ 0.22
SMPD1-206ENST00000531336 MAP4K1Q92918 833 aa16.4■□□□□ 0.22
SMPD1-206ENST00000531336 KCNH4Q9UQ05 1017 aa16.4■□□□□ 0.22
SMPD1-206ENST00000531336 AFG3L2Q9Y4W6 797 aa16.4■□□□□ 0.22
SMPD1-206ENST00000531336 NEDD4P46934 1319 aa16.4■□□□□ 0.22
SMPD1-206ENST00000531336 CCL15-CCL14A0A0B4J2E2 113 aa16.39■□□□□ 0.21
SMPD1-206ENST00000531336 SREBF2Q12772 1141 aa16.39■□□□□ 0.21
SMPD1-206ENST00000531336 SPP2Q13103 211 aa16.39■□□□□ 0.21
SMPD1-206ENST00000531336 CCL15Q16663 113 aa16.39■□□□□ 0.21
SMPD1-206ENST00000531336 FAM47AQ5JRC9 791 aa16.39■□□□□ 0.21
SMPD1-206ENST00000531336 MFSD6Q6ZSS7 791 aa16.39■□□□□ 0.21
SMPD1-206ENST00000531336 ZNF280CQ8ND82 737 aa16.39■□□□□ 0.21
SMPD1-206ENST00000531336 MS4A4AQ96JQ5 239 aa16.39■□□□□ 0.21
SMPD1-206ENST00000531336 TBC1D2Q9BYX2 928 aa16.39■□□□□ 0.21
SMPD1-206ENST00000531336 RNF41Q9H4P4 317 aaPredicted RBP16.39■□□□□ 0.21
SMPD1-206ENST00000531336 PLIN4Q96Q06 1357 aa16.38■□□□□ 0.21
SMPD1-206ENST00000531336 TSPY2A6NKD2 308 aa16.38■□□□□ 0.21
SMPD1-206ENST00000531336 ORC4O43929 436 aa16.38■□□□□ 0.21
SMPD1-206ENST00000531336 RANBP6O60518 1105 aaKnown RBP16.38■□□□□ 0.21
SMPD1-206ENST00000531336 CYP21A2P08686 494 aa16.38■□□□□ 0.21
SMPD1-206ENST00000531336 TSPY3P0CV98 308 aa16.38■□□□□ 0.21
SMPD1-206ENST00000531336 TSPY8P0CW00 308 aa16.38■□□□□ 0.21
SMPD1-206ENST00000531336 CETPP11597 493 aa16.38■□□□□ 0.21
SMPD1-206ENST00000531336 TFAP4Q01664 338 aa16.38■□□□□ 0.21
SMPD1-206ENST00000531336 ICA1Q05084 483 aa16.38■□□□□ 0.21
SMPD1-206ENST00000531336 MTMR2Q13614 643 aa16.38■□□□□ 0.21
SMPD1-206ENST00000531336 BRI3BPQ8WY22 251 aa16.38■□□□□ 0.21
SMPD1-206ENST00000531336 FEZ1Q99689 392 aa16.38■□□□□ 0.21
SMPD1-206ENST00000531336 WDR18Q9BV38 432 aa16.38■□□□□ 0.21
SMPD1-206ENST00000531336 A0A0G2JLL6 359 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms