RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 UBE2OQ9C0C9 1292 aaKnown RBP11.37□□□□□ -0.59
CHMP4A-205ENST00000531158 MORF4L1Q9UBU8 362 aa11.37□□□□□ -0.59
CHMP4A-205ENST00000531158 NAV1Q8NEY1 1877 aa11.37□□□□□ -0.59
CHMP4A-205ENST00000531158 A0A0G2JMZ2 1700 aa11.37□□□□□ -0.59
CHMP4A-205ENST00000531158 PNMA6EA0A0J9YXQ4 647 aa11.36□□□□□ -0.59
CHMP4A-205ENST00000531158 POTEB2H3BUK9 544 aa11.36□□□□□ -0.59
CHMP4A-205ENST00000531158 GCLCP48506 637 aaPredicted RBP11.36□□□□□ -0.59
CHMP4A-205ENST00000531158 RARSP54136 660 aaKnown RBP11.36□□□□□ -0.59
CHMP4A-205ENST00000531158 MTMR2Q13614 643 aa11.36□□□□□ -0.59
CHMP4A-205ENST00000531158 NECAB2Q7Z6G3 386 aa11.36□□□□□ -0.59
CHMP4A-205ENST00000531158 ANKLE1Q8NAG6 615 aa11.36□□□□□ -0.59
CHMP4A-205ENST00000531158 MAFAQ8NHW3 353 aaPredicted RBP11.36□□□□□ -0.59
CHMP4A-205ENST00000531158 PNMA3Q9UL41 463 aa11.36□□□□□ -0.59
CHMP4A-205ENST00000531158 ZNFX1Q9P2E3 1918 aaKnown RBP11.35□□□□□ -0.59
CHMP4A-205ENST00000531158 USP17L5A8MUK1 530 aa11.35□□□□□ -0.59
CHMP4A-205ENST00000531158 FAM109BQ6ICB4 259 aaPredicted RBP11.35□□□□□ -0.59
CHMP4A-205ENST00000531158 TEX11Q8IYF3 940 aa11.35□□□□□ -0.59
CHMP4A-205ENST00000531158 NEUROD6Q96NK8 337 aa11.35□□□□□ -0.59
CHMP4A-205ENST00000531158 P2RX7Q99572 595 aaKnown RBP11.35□□□□□ -0.59
CHMP4A-205ENST00000531158 WDR18Q9BV38 432 aa11.35□□□□□ -0.59
CHMP4A-205ENST00000531158 RBPJLQ9UBG7 517 aa11.35□□□□□ -0.59
CHMP4A-205ENST00000531158 OGDHLQ9ULD0 1010 aa11.35□□□□□ -0.59
CHMP4A-205ENST00000531158 AKAP2Q9Y2D5 859 aa11.35□□□□□ -0.59
CHMP4A-205ENST00000531158 FLT1P17948 1338 aa11.35□□□□□ -0.59
CHMP4A-205ENST00000531158 PRUNE2Q8WUY3 3088 aa11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 CT47B1P0C2W7 299 aaPredicted RBP11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 COL6A1P12109 1028 aa11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 CAPN2P17655 700 aa11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 HOXA7P31268 230 aaPredicted RBP11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 BACE1P56817 501 aa11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 CCL14Q16627 93 aa11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 Q3C1V9 767 aa11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 METTL16Q86W50 562 aaKnown RBP11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 USP6NLQ92738 828 aa11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 NBPF3Q9H094 633 aa11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 PORCNQ9H237 461 aa11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 HMX1Q9NP08 348 aaPredicted RBP11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 SNRKQ9NRH2 765 aa11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 AATFQ9NY61 560 aaKnown RBP eCLIP11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 RAI14Q9P0K7 980 aa11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 HERC5Q9UII4 1024 aaKnown RBP11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 COL11A1P12107 1806 aaPredicted RBP11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 ZNF236Q9UL36 1845 aa11.34□□□□□ -0.59
CHMP4A-205ENST00000531158 MUC3AQ02505 3323 aa11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 GDF11O95390 407 aa11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 MAP4K4O95819 1239 aaPredicted RBP11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 TRIM27P14373 513 aa11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 CYP2B6P20813 491 aa11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 CCND3P30281 292 aaPredicted RBP11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 HERVK_113P62684 666 aa11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 GSTO1P78417 241 aa11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 MAP3K12Q12852 859 aa11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 LHX8Q68G74 356 aa11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 MAPKAPK5Q8IW41 473 aa11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 ARHGAP45Q92619 1136 aa11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 CDX2Q99626 313 aaPredicted RBP11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 TBC1D2Q9BYX2 928 aa11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 C11orf49Q9H6J7 331 aa11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 PI4KBQ9UBF8 816 aa11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 PALD1Q9ULE6 856 aa11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 ZBTB21Q9ULJ3 1066 aa11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 BAZ2AQ9UIF9 1905 aaKnown RBP11.33□□□□□ -0.6
CHMP4A-205ENST00000531158 PLXNA1Q9UIW2 1896 aa11.32□□□□□ -0.6
CHMP4A-205ENST00000531158 CYP2E1P05181 493 aaPredicted RBP11.32□□□□□ -0.6
CHMP4A-205ENST00000531158 LDHCP07864 332 aa11.32□□□□□ -0.6
CHMP4A-205ENST00000531158 GNAI3P08754 354 aa11.32□□□□□ -0.6
CHMP4A-205ENST00000531158 PPP4CP60510 307 aa11.32□□□□□ -0.6
CHMP4A-205ENST00000531158 CACNB2Q08289 660 aaPredicted RBP11.32□□□□□ -0.6
CHMP4A-205ENST00000531158 PABPC4Q13310 644 aaKnown RBP eCLIP11.32□□□□□ -0.6
CHMP4A-205ENST00000531158 ZNF697Q5TEC3 545 aa11.32□□□□□ -0.6
CHMP4A-205ENST00000531158 DBNDD2Q9BQY9 259 aa11.32□□□□□ -0.6
CHMP4A-205ENST00000531158 PIH1D3Q9NQM4 214 aaKnown RBP11.32□□□□□ -0.6
CHMP4A-205ENST00000531158 EMILIN3Q9NT22 766 aa11.32□□□□□ -0.6
CHMP4A-205ENST00000531158 SMCHD1A6NHR9 2005 aa11.31□□□□□ -0.6
CHMP4A-205ENST00000531158 CNMDO75829 334 aa11.31□□□□□ -0.6
CHMP4A-205ENST00000531158 ASNSP08243 561 aa11.31□□□□□ -0.6
CHMP4A-205ENST00000531158 XRCC5P13010 732 aaKnown RBP11.31□□□□□ -0.6
CHMP4A-205ENST00000531158 DYNLL1P63167 89 aaKnown RBP11.31□□□□□ -0.6
CHMP4A-205ENST00000531158 LRRC26Q2I0M4 334 aa11.31□□□□□ -0.6
CHMP4A-205ENST00000531158 MORN1Q5T089 497 aa11.31□□□□□ -0.6
CHMP4A-205ENST00000531158 GPR142Q7Z601 462 aa11.31□□□□□ -0.6
CHMP4A-205ENST00000531158 TGFBRAP1Q8WUH2 860 aa11.31□□□□□ -0.6
CHMP4A-205ENST00000531158 DHX36Q9H2U1 1008 aaKnown RBP11.31□□□□□ -0.6
CHMP4A-205ENST00000531158 AS3MTQ9HBK9 375 aa11.31□□□□□ -0.6
CHMP4A-205ENST00000531158 TLR7Q9NYK1 1049 aaKnown RBP11.31□□□□□ -0.6
CHMP4A-205ENST00000531158 FLRT1Q9NZU1 646 aa11.31□□□□□ -0.6
CHMP4A-205ENST00000531158 LRP2BPQ9P2M1 347 aa11.31□□□□□ -0.6
CHMP4A-205ENST00000531158 HDAC5Q9UQL6 1122 aa11.31□□□□□ -0.6
CHMP4A-205ENST00000531158 TTC28Q96AY4 2481 aa11.31□□□□□ -0.6
CHMP4A-205ENST00000531158 BCAR3O75815 825 aa11.3□□□□□ -0.6
CHMP4A-205ENST00000531158 NEFLP07196 543 aa11.3□□□□□ -0.6
CHMP4A-205ENST00000531158 UQCRFS1P1P0C7P4 283 aa11.3□□□□□ -0.6
CHMP4A-205ENST00000531158 ERVK-9P63128 1117 aa11.3□□□□□ -0.6
CHMP4A-205ENST00000531158 ERVK-24P63145 666 aa11.3□□□□□ -0.6
CHMP4A-205ENST00000531158 IRX3P78415 501 aaPredicted RBP11.3□□□□□ -0.6
CHMP4A-205ENST00000531158 POLA2Q14181 598 aa11.3□□□□□ -0.6
CHMP4A-205ENST00000531158 TNNI3KQ59H18 835 aa11.3□□□□□ -0.6
CHMP4A-205ENST00000531158 TJAP1Q5JTD0 557 aa11.3□□□□□ -0.6
CHMP4A-205ENST00000531158 GORABQ5T7V8 394 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms