RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ZNF589Q86UQ0 364 aaPredicted RBP9.17□□□□□ -0.94
CSDE1-214ENST00000530886 THOC1Q96FV9 657 aaKnown RBP9.17□□□□□ -0.94
CSDE1-214ENST00000530886 SLC39A2Q9NP94 309 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 CARMIL3Q8ND23 1372 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 A0A1B0GVL5 298 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 PSMD14O00487 310 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 PPFIA2O75334 1257 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 DNAJC8O75937 253 aaPredicted RBP9.17□□□□□ -0.94
CSDE1-214ENST00000530886 PDHBP11177 359 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 ARID4AP29374 1257 aaPredicted RBP9.17□□□□□ -0.94
CSDE1-214ENST00000530886 GBP2P32456 591 aaPredicted RBP9.17□□□□□ -0.94
CSDE1-214ENST00000530886 ATP2B2Q01814 1243 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 APBA1Q02410 837 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 BEND3Q5T5X7 828 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 CCHCR1Q8TD31 782 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 ZFAND2BQ8WV99 257 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 ACSBG1Q96GR2 724 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 TBC1D2BQ9UPU7 963 aa9.17□□□□□ -0.94
CSDE1-214ENST00000530886 ZBTB12Q9Y330 459 aaPredicted RBP9.17□□□□□ -0.94
CSDE1-214ENST00000530886 C5P01031 1676 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 COL22A1Q8NFW1 1626 aaPredicted RBP9.16□□□□□ -0.94
CSDE1-214ENST00000530886 A2ML1A8K2U0 1454 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 NUTM2FA1L443 756 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 PDLIM1O00151 329 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 FAM107AO95990 144 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 TNFRSF8P28908 595 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 CKAP4Q07065 602 aaKnown RBP9.16□□□□□ -0.94
CSDE1-214ENST00000530886 NMIQ13287 307 aaPredicted RBP9.16□□□□□ -0.94
CSDE1-214ENST00000530886 NUTM2GQ5VZR2 741 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 BZW1Q7L1Q6 419 aaKnown RBP9.16□□□□□ -0.94
CSDE1-214ENST00000530886 TCEANC2Q96MN5 208 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 LZTFL1Q9NQ48 299 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 HPSEQ9Y251 543 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 U3KPZ7 1027 aaPredicted RBP9.16□□□□□ -0.94
CSDE1-214ENST00000530886 SPEF2Q9C093 1822 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 LTN1O94822 1766 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 SOWAHDA6NJG2 315 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 GHRP10912 638 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 LSP1P33241 339 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 RBM5P52756 815 aaKnown RBP eCLIP9.16□□□□□ -0.94
CSDE1-214ENST00000530886 ADKP55263 362 aaKnown RBP9.16□□□□□ -0.94
CSDE1-214ENST00000530886 CEBPZQ03701 1054 aaKnown RBP9.16□□□□□ -0.94
CSDE1-214ENST00000530886 ITIH3Q06033 890 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 ZNF662Q6ZS27 426 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 CEP57Q86XR8 500 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 RASSF8Q8NHQ8 419 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 MKL1Q969V6 931 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 FMNL2Q96PY5 1086 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 TRPC6Q9Y210 931 aa9.16□□□□□ -0.94
CSDE1-214ENST00000530886 PHRF1Q9P1Y6 1649 aaKnown RBP9.16□□□□□ -0.94
CSDE1-214ENST00000530886 A0A1B0GTH6 734 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 TAF5LO75529 589 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 IMPDH2P12268 514 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 BMP6P22004 513 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 PBX1P40424 430 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 NNTQ13423 1086 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 MTF1Q14872 753 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 PTGISQ16647 500 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 C1QTNF12Q5T7M4 302 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 PAPD7Q5XG87 772 aaKnown RBP9.15□□□□□ -0.94
CSDE1-214ENST00000530886 CWF19L1Q69YN2 538 aaKnown RBP9.15□□□□□ -0.94
CSDE1-214ENST00000530886 CAPRIN2Q6IMN6 1127 aaKnown RBP9.15□□□□□ -0.94
CSDE1-214ENST00000530886 ZNF572Q7Z3I7 529 aaPredicted RBP9.15□□□□□ -0.94
CSDE1-214ENST00000530886 WAPLQ7Z5K2 1190 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 SPDYE1Q8NFV5 336 aaPredicted RBP9.15□□□□□ -0.94
CSDE1-214ENST00000530886 MROH7-TTC4A0A0A0MT08 1334 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 A0A0U1RQJ8 604 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 FDPSP14324 419 aaKnown RBP9.15□□□□□ -0.94
CSDE1-214ENST00000530886 GCLCP48506 637 aaPredicted RBP9.15□□□□□ -0.94
CSDE1-214ENST00000530886 KCNB1Q14721 858 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 TTMPQ5BVD1 217 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 OLFM4Q6UX06 510 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 APTXQ7Z2E3 356 aaKnown RBP9.15□□□□□ -0.94
CSDE1-214ENST00000530886 SDCCAG8Q86SQ7 713 aaPredicted RBP9.15□□□□□ -0.94
CSDE1-214ENST00000530886 RPUSD2Q8IZ73 545 aaKnown RBP9.15□□□□□ -0.94
CSDE1-214ENST00000530886 ATRIPQ8WXE1 791 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 MED15Q96RN5 788 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 SENP2Q9HC62 589 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 CHCHD3Q9NX63 227 aaKnown RBP9.15□□□□□ -0.94
CSDE1-214ENST00000530886 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.15□□□□□ -0.94
CSDE1-214ENST00000530886 MYH7P12883 1935 aa9.15□□□□□ -0.94
CSDE1-214ENST00000530886 ITIH6Q6UXX5 1313 aa9.15□□□□□ -0.95
CSDE1-214ENST00000530886 IGSF1Q8N6C5 1336 aa9.15□□□□□ -0.95
CSDE1-214ENST00000530886 PRR36Q9H6K5 1346 aa9.15□□□□□ -0.95
CSDE1-214ENST00000530886 ECM2O94769 699 aaPredicted RBP9.15□□□□□ -0.95
CSDE1-214ENST00000530886 OS9Q13438 667 aaPredicted RBP9.15□□□□□ -0.95
CSDE1-214ENST00000530886 SKIDA1Q1XH10 827 aa9.15□□□□□ -0.95
CSDE1-214ENST00000530886 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.15□□□□□ -0.95
CSDE1-214ENST00000530886 CD302Q8IX05 232 aa9.15□□□□□ -0.95
CSDE1-214ENST00000530886 RBM12BQ8IXT5 1001 aaKnown RBP9.15□□□□□ -0.95
CSDE1-214ENST00000530886 FBXL16Q8N461 479 aa9.15□□□□□ -0.95
CSDE1-214ENST00000530886 TRIM58Q8NG06 486 aa9.15□□□□□ -0.95
CSDE1-214ENST00000530886 MYCBPAPQ8TBZ2 947 aa9.15□□□□□ -0.95
CSDE1-214ENST00000530886 ENOX1Q8TC92 643 aaKnown RBP9.15□□□□□ -0.95
CSDE1-214ENST00000530886 CAVIN3Q969G5 261 aa9.15□□□□□ -0.95
CSDE1-214ENST00000530886 FBXW7Q969H0 707 aa9.15□□□□□ -0.95
CSDE1-214ENST00000530886 KAZALD1Q96I82 304 aa9.15□□□□□ -0.95
CSDE1-214ENST00000530886 MMTAG2Q9BU76 263 aaKnown RBP9.15□□□□□ -0.95
CSDE1-214ENST00000530886 ECHDC1Q9NTX5 307 aa9.15□□□□□ -0.95
CSDE1-214ENST00000530886 ZNF609O15014 1411 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms