RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 FAM161BQ96MY7 647 aa13.23□□□□□ -0.29
TM9SF1-210ENST00000530563 HERC5Q9UII4 1024 aaKnown RBP13.23□□□□□ -0.29
TM9SF1-210ENST00000530563 A0A1B0GUL7 405 aa13.22□□□□□ -0.29
TM9SF1-210ENST00000530563 UBTFL1P0CB47 393 aaPredicted RBP13.22□□□□□ -0.29
TM9SF1-210ENST00000530563 ERVK-9P63128 1117 aa13.22□□□□□ -0.29
TM9SF1-210ENST00000530563 ERVK-24P63145 666 aa13.22□□□□□ -0.29
TM9SF1-210ENST00000530563 IRX3P78415 501 aaPredicted RBP13.22□□□□□ -0.29
TM9SF1-210ENST00000530563 AS3MTQ9HBK9 375 aa13.22□□□□□ -0.29
TM9SF1-210ENST00000530563 FLRT1Q9NZU1 646 aa13.22□□□□□ -0.29
TM9SF1-210ENST00000530563 BDP1A6H8Y1 2624 aa13.21□□□□□ -0.29
TM9SF1-210ENST00000530563 CNMDO75829 334 aa13.21□□□□□ -0.29
TM9SF1-210ENST00000530563 RGS2P41220 211 aa13.21□□□□□ -0.29
TM9SF1-210ENST00000530563 TFCP2Q12800 502 aa13.21□□□□□ -0.29
TM9SF1-210ENST00000530563 PLEKHH3Q7Z736 793 aa13.21□□□□□ -0.29
TM9SF1-210ENST00000530563 SH3RF3Q8TEJ3 882 aaPredicted RBP13.21□□□□□ -0.29
TM9SF1-210ENST00000530563 CDX2Q99626 313 aaPredicted RBP13.21□□□□□ -0.29
TM9SF1-210ENST00000530563 SEMA6BQ9H3T3 888 aa13.21□□□□□ -0.29
TM9SF1-210ENST00000530563 EMILIN3Q9NT22 766 aa13.21□□□□□ -0.29
TM9SF1-210ENST00000530563 PI4KBQ9UBF8 816 aa13.21□□□□□ -0.29
TM9SF1-210ENST00000530563 MAST2Q6P0Q8 1798 aa13.2□□□□□ -0.3
TM9SF1-210ENST00000530563 C19orf81C9J6K1 198 aa13.2□□□□□ -0.3
TM9SF1-210ENST00000530563 USP17L10C9JJH3 530 aa13.2□□□□□ -0.3
TM9SF1-210ENST00000530563 LDHCP07864 332 aa13.2□□□□□ -0.3
TM9SF1-210ENST00000530563 ASNSP08243 561 aa13.2□□□□□ -0.3
TM9SF1-210ENST00000530563 MVPQ14764 893 aaKnown RBP13.2□□□□□ -0.3
TM9SF1-210ENST00000530563 TEX11Q8IYF3 940 aa13.2□□□□□ -0.3
TM9SF1-210ENST00000530563 SPATA5Q8NB90 893 aa13.2□□□□□ -0.3
TM9SF1-210ENST00000530563 APBA2Q99767 749 aa13.2□□□□□ -0.3
TM9SF1-210ENST00000530563 SENP6Q9GZR1 1112 aaPredicted RBP13.2□□□□□ -0.3
TM9SF1-210ENST00000530563 PRDM6Q9NQX0 595 aa13.2□□□□□ -0.3
TM9SF1-210ENST00000530563 GSTO1P78417 241 aa13.19□□□□□ -0.3
TM9SF1-210ENST00000530563 MAP2K5Q13163 448 aa13.19□□□□□ -0.3
TM9SF1-210ENST00000530563 PDE3AQ14432 1141 aa13.19□□□□□ -0.3
TM9SF1-210ENST00000530563 SHHQ15465 462 aa13.19□□□□□ -0.3
TM9SF1-210ENST00000530563 ALDH1L2Q3SY69 923 aa13.19□□□□□ -0.3
TM9SF1-210ENST00000530563 TRPV1Q8NER1 839 aa13.19□□□□□ -0.3
TM9SF1-210ENST00000530563 EDC3Q96F86 508 aaKnown RBP13.19□□□□□ -0.3
TM9SF1-210ENST00000530563 DHX36Q9H2U1 1008 aaKnown RBP13.19□□□□□ -0.3
TM9SF1-210ENST00000530563 TTYH1Q9H313 450 aaPredicted RBP13.19□□□□□ -0.3
TM9SF1-210ENST00000530563 TMOD4Q9NZQ9 345 aa13.19□□□□□ -0.3
TM9SF1-210ENST00000530563 LTBP2Q14767 1821 aa13.18□□□□□ -0.3
TM9SF1-210ENST00000530563 FRMPD3Q5JV73 1810 aa13.18□□□□□ -0.3
TM9SF1-210ENST00000530563 ARID4AP29374 1257 aaPredicted RBP13.18□□□□□ -0.3
TM9SF1-210ENST00000530563 PPP4CP60510 307 aa13.18□□□□□ -0.3
TM9SF1-210ENST00000530563 C9orf50Q5SZB4 431 aa13.18□□□□□ -0.3
TM9SF1-210ENST00000530563 ZNF697Q5TEC3 545 aa13.18□□□□□ -0.3
TM9SF1-210ENST00000530563 FOXP4Q8IVH2 680 aaPredicted RBP13.18□□□□□ -0.3
TM9SF1-210ENST00000530563 LPAR1Q92633 364 aa13.18□□□□□ -0.3
TM9SF1-210ENST00000530563 MEIS3Q99687 375 aa13.18□□□□□ -0.3
TM9SF1-210ENST00000530563 GINM1Q9NU53 330 aa13.18□□□□□ -0.3
TM9SF1-210ENST00000530563 ZBTB21Q9ULJ3 1066 aa13.18□□□□□ -0.3
TM9SF1-210ENST00000530563 AKAP2Q9Y2D5 859 aa13.18□□□□□ -0.3
TM9SF1-210ENST00000530563 RABGAP1Q9Y3P9 1069 aa13.18□□□□□ -0.3
TM9SF1-210ENST00000530563 XIRP2A4UGR9 3374 aa13.18□□□□□ -0.3
TM9SF1-210ENST00000530563 REV3LO60673 3130 aa13.17□□□□□ -0.3
TM9SF1-210ENST00000530563 GDF11O95390 407 aa13.17□□□□□ -0.3
TM9SF1-210ENST00000530563 HOXC6P09630 235 aa13.17□□□□□ -0.3
TM9SF1-210ENST00000530563 MCAMP43121 646 aa13.17□□□□□ -0.3
TM9SF1-210ENST00000530563 ATN1P54259 1190 aaPredicted RBP13.17□□□□□ -0.3
TM9SF1-210ENST00000530563 RTP1P59025 263 aa13.17□□□□□ -0.3
TM9SF1-210ENST00000530563 SLFN5Q08AF3 891 aa13.17□□□□□ -0.3
TM9SF1-210ENST00000530563 MTX1Q13505 466 aa13.17□□□□□ -0.3
TM9SF1-210ENST00000530563 ADGRA1Q86SQ6 560 aa13.17□□□□□ -0.3
TM9SF1-210ENST00000530563 FAM9BQ8IZU0 186 aa13.17□□□□□ -0.3
TM9SF1-210ENST00000530563 MAFAQ8NHW3 353 aaPredicted RBP13.17□□□□□ -0.3
TM9SF1-210ENST00000530563 GTF3C2Q8WUA4 911 aaPredicted RBP13.17□□□□□ -0.3
TM9SF1-210ENST00000530563 C12orf42Q96LP6 360 aa13.17□□□□□ -0.3
TM9SF1-210ENST00000530563 LBHD1Q9BQE6 289 aaPredicted RBP13.17□□□□□ -0.3
TM9SF1-210ENST00000530563 PAGR1Q9BTK6 254 aa13.17□□□□□ -0.3
TM9SF1-210ENST00000530563 RAI14Q9P0K7 980 aa13.17□□□□□ -0.3
TM9SF1-210ENST00000530563 DDX20Q9UHI6 824 aaKnown RBP13.17□□□□□ -0.3
TM9SF1-210ENST00000530563 FLT1P17948 1338 aa13.16□□□□□ -0.3
TM9SF1-210ENST00000530563 CHD7Q9P2D1 2997 aa13.16□□□□□ -0.3
TM9SF1-210ENST00000530563 SLC15A5A6NIM6 579 aa13.16□□□□□ -0.3
TM9SF1-210ENST00000530563 E9PSI1 815 aa13.16□□□□□ -0.3
TM9SF1-210ENST00000530563 DNM1LO00429 736 aa13.16□□□□□ -0.3
TM9SF1-210ENST00000530563 PTPREP23469 700 aa13.16□□□□□ -0.3
TM9SF1-210ENST00000530563 MAPKAPK5Q8IW41 473 aa13.16□□□□□ -0.3
TM9SF1-210ENST00000530563 NPLOC4Q8TAT6 608 aa13.16□□□□□ -0.3
TM9SF1-210ENST00000530563 NEUROD6Q96NK8 337 aa13.16□□□□□ -0.3
TM9SF1-210ENST00000530563 AATFQ9NY61 560 aaKnown RBP eCLIP13.16□□□□□ -0.3
TM9SF1-210ENST00000530563 PALD1Q9ULE6 856 aa13.16□□□□□ -0.3
TM9SF1-210ENST00000530563 NDUFB9Q9Y6M9 179 aa13.16□□□□□ -0.3
TM9SF1-210ENST00000530563 CYP2C19P33261 490 aa13.15□□□□□ -0.3
TM9SF1-210ENST00000530563 GRB14Q14449 540 aa13.15□□□□□ -0.3
TM9SF1-210ENST00000530563 SNX17Q15036 470 aa13.15□□□□□ -0.3
TM9SF1-210ENST00000530563 MFSD14CQ5VZR4 134 aa13.15□□□□□ -0.3
TM9SF1-210ENST00000530563 USP17L2Q6R6M4 530 aa13.15□□□□□ -0.3
TM9SF1-210ENST00000530563 LBX2Q6XYB7 198 aa13.15□□□□□ -0.3
TM9SF1-210ENST00000530563 CATSPERGQ6ZRH7 1159 aa13.15□□□□□ -0.3
TM9SF1-210ENST00000530563 TRMT2AQ8IZ69 625 aaKnown RBP13.15□□□□□ -0.3
TM9SF1-210ENST00000530563 TGFBRAP1Q8WUH2 860 aa13.15□□□□□ -0.3
TM9SF1-210ENST00000530563 MYLIPQ8WY64 445 aa13.15□□□□□ -0.3
TM9SF1-210ENST00000530563 SMC4Q9NTJ3 1288 aa13.15□□□□□ -0.3
TM9SF1-210ENST00000530563 BTBD7Q9P203 1132 aa13.15□□□□□ -0.3
TM9SF1-210ENST00000530563 NOB1Q9ULX3 412 aaKnown RBP13.15□□□□□ -0.3
TM9SF1-210ENST00000530563 RLFQ13129 1914 aa13.15□□□□□ -0.3
TM9SF1-210ENST00000530563 TRIM43BA6NCK2 446 aa13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 USP17L15C9J2P7 530 aa13.14□□□□□ -0.31
TM9SF1-210ENST00000530563 USP17L13C9JLJ4 530 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms