RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 KLHL3Q9UH77 587 aa9.25□□□□□ -0.93
CASP4-208ENST00000530309 CHURC1-FNTBB4DL54 471 aa9.24□□□□□ -0.93
CASP4-208ENST00000530309 NFICP08651 508 aa9.24□□□□□ -0.93
CASP4-208ENST00000530309 MAP4P27816 1152 aaKnown RBP9.24□□□□□ -0.93
CASP4-208ENST00000530309 GSK3AP49840 483 aa9.24□□□□□ -0.93
CASP4-208ENST00000530309 SLBPQ14493 270 aaKnown RBP eCLIP9.24□□□□□ -0.93
CASP4-208ENST00000530309 CDCP2Q5VXM1 449 aa9.24□□□□□ -0.93
CASP4-208ENST00000530309 OVOS1Q6IE37 1185 aa9.24□□□□□ -0.93
CASP4-208ENST00000530309 FAM20CQ8IXL6 584 aa9.24□□□□□ -0.93
CASP4-208ENST00000530309 FAM169BQ8N8A8 192 aa9.24□□□□□ -0.93
CASP4-208ENST00000530309 FAM13CQ8NE31 585 aa9.24□□□□□ -0.93
CASP4-208ENST00000530309 ATG4CQ96DT6 458 aa9.24□□□□□ -0.93
CASP4-208ENST00000530309 TM9SF2Q99805 663 aa9.24□□□□□ -0.93
CASP4-208ENST00000530309 SSBP4Q9BWG4 385 aaPredicted RBP9.24□□□□□ -0.93
CASP4-208ENST00000530309 DAGLAQ9Y4D2 1042 aa9.24□□□□□ -0.93
CASP4-208ENST00000530309 UPK3BL1B0FP48 263 aa9.23□□□□□ -0.93
CASP4-208ENST00000530309 UPK3BL2E5RIL1 263 aa9.23□□□□□ -0.93
CASP4-208ENST00000530309 DHX15O43143 795 aaKnown RBP9.23□□□□□ -0.93
CASP4-208ENST00000530309 RXRBP28702 533 aa9.23□□□□□ -0.93
CASP4-208ENST00000530309 MAP7Q14244 749 aa9.23□□□□□ -0.93
CASP4-208ENST00000530309 TNNI3KQ59H18 835 aa9.23□□□□□ -0.93
CASP4-208ENST00000530309 SOGA3Q5TF21 947 aa9.23□□□□□ -0.93
CASP4-208ENST00000530309 CKAP2LQ8IYA6 745 aa9.23□□□□□ -0.93
CASP4-208ENST00000530309 SLFN12Q8IYM2 578 aa9.23□□□□□ -0.93
CASP4-208ENST00000530309 CNNM2Q9H8M5 875 aa9.23□□□□□ -0.93
CASP4-208ENST00000530309 SMAD7O15105 426 aaKnown RBP9.22□□□□□ -0.93
CASP4-208ENST00000530309 CST3P01034 146 aaPredicted RBP9.22□□□□□ -0.93
CASP4-208ENST00000530309 GATA4P43694 442 aa9.22□□□□□ -0.93
CASP4-208ENST00000530309 ARSHQ5FYA8 562 aa9.22□□□□□ -0.93
CASP4-208ENST00000530309 RUFY4Q6ZNE9 571 aa9.22□□□□□ -0.93
CASP4-208ENST00000530309 ANKS3Q6ZW76 656 aa9.22□□□□□ -0.93
CASP4-208ENST00000530309 NLRC3Q7RTR2 1065 aa9.22□□□□□ -0.93
CASP4-208ENST00000530309 TAB3Q8N5C8 712 aaPredicted RBP9.22□□□□□ -0.93
CASP4-208ENST00000530309 FAM95CA0A1B0GW59 222 aa9.21□□□□□ -0.94
CASP4-208ENST00000530309 LRIG2O94898 1065 aa9.21□□□□□ -0.94
CASP4-208ENST00000530309 NME1P15531 152 aaKnown RBP9.21□□□□□ -0.94
CASP4-208ENST00000530309 PRAMEF13Q5VWM6 474 aa9.21□□□□□ -0.94
CASP4-208ENST00000530309 INTS3Q68E01 1043 aaKnown RBP9.21□□□□□ -0.94
CASP4-208ENST00000530309 ARMCX6Q7L4S7 300 aa9.21□□□□□ -0.94
CASP4-208ENST00000530309 C19orf47Q8N9M1 422 aaKnown RBP9.21□□□□□ -0.94
CASP4-208ENST00000530309 FOXQ1Q9C009 403 aa9.21□□□□□ -0.94
CASP4-208ENST00000530309 KCNF1Q9H3M0 494 aa9.21□□□□□ -0.94
CASP4-208ENST00000530309 TNFRSF10CO14798 259 aa9.2□□□□□ -0.94
CASP4-208ENST00000530309 KLF4O43474 513 aa9.2□□□□□ -0.94
CASP4-208ENST00000530309 RAG1P15918 1043 aa9.2□□□□□ -0.94
CASP4-208ENST00000530309 GUCY2CP25092 1073 aa9.2□□□□□ -0.94
CASP4-208ENST00000530309 CASP7P55210 303 aa9.2□□□□□ -0.94
CASP4-208ENST00000530309 NBPF6Q5VWK0 638 aa9.2□□□□□ -0.94
CASP4-208ENST00000530309 BEND4Q6ZU67 534 aa9.2□□□□□ -0.94
CASP4-208ENST00000530309 NBPF4Q96M43 638 aa9.2□□□□□ -0.94
CASP4-208ENST00000530309 DPH2Q9BQC3 489 aaPredicted RBP9.2□□□□□ -0.94
CASP4-208ENST00000530309 LGR6Q9HBX8 967 aa9.2□□□□□ -0.94
CASP4-208ENST00000530309 DYNC1LI2O43237 492 aaPredicted RBP9.19□□□□□ -0.94
CASP4-208ENST00000530309 GDF11O95390 407 aa9.19□□□□□ -0.94
CASP4-208ENST00000530309 PPP2R5EQ16537 467 aa9.19□□□□□ -0.94
CASP4-208ENST00000530309 PAOXQ6QHF9 649 aa9.19□□□□□ -0.94
CASP4-208ENST00000530309 SEZ6L2Q6UXD5 910 aa9.19□□□□□ -0.94
CASP4-208ENST00000530309 CLEC10AQ8IUN9 316 aa9.19□□□□□ -0.94
CASP4-208ENST00000530309 MFSD2AQ8NA29 543 aa9.19□□□□□ -0.94
CASP4-208ENST00000530309 PSMG3-AS1Q96PY0 264 aa9.19□□□□□ -0.94
CASP4-208ENST00000530309 R3HCC1Q9Y3T6 440 aaKnown RBP9.19□□□□□ -0.94
CASP4-208ENST00000530309 ACRP10323 421 aa9.18□□□□□ -0.94
CASP4-208ENST00000530309 NFKBIBQ15653 356 aa9.18□□□□□ -0.94
CASP4-208ENST00000530309 TTC6Q86TZ1 520 aa9.18□□□□□ -0.94
CASP4-208ENST00000530309 PHACTR4Q8IZ21 702 aa9.18□□□□□ -0.94
CASP4-208ENST00000530309 TMEM151AQ8N4L1 468 aa9.18□□□□□ -0.94
CASP4-208ENST00000530309 PMFBP1Q8TBY8 1022 aa9.18□□□□□ -0.94
CASP4-208ENST00000530309 CYB5D2Q8WUJ1 264 aa9.18□□□□□ -0.94
CASP4-208ENST00000530309 HNRNPLLQ8WVV9 542 aaKnown RBP9.18□□□□□ -0.94
CASP4-208ENST00000530309 TP53INP1Q96A56 240 aa9.18□□□□□ -0.94
CASP4-208ENST00000530309 CCDC74BQ96LY2 380 aa9.18□□□□□ -0.94
CASP4-208ENST00000530309 SLC9A7Q96T83 725 aa9.18□□□□□ -0.94
CASP4-208ENST00000530309 FAM83CQ9BQN1 747 aa9.18□□□□□ -0.94
CASP4-208ENST00000530309 ACTR10Q9NZ32 417 aa9.18□□□□□ -0.94
CASP4-208ENST00000530309 A0A1W2PQH9 124 aa9.17□□□□□ -0.94
CASP4-208ENST00000530309 RGS13O14921 159 aa9.17□□□□□ -0.94
CASP4-208ENST00000530309 ITGB2P05107 769 aa9.17□□□□□ -0.94
CASP4-208ENST00000530309 RAB33AQ14088 237 aa9.17□□□□□ -0.94
CASP4-208ENST00000530309 PLA2G4EQ3MJ16 856 aa9.17□□□□□ -0.94
CASP4-208ENST00000530309 LNPKQ9C0E8 428 aa9.17□□□□□ -0.94
CASP4-208ENST00000530309 TNKS2Q9H2K2 1166 aa9.17□□□□□ -0.94
CASP4-208ENST00000530309 C1GALT1Q9NS00 363 aa9.17□□□□□ -0.94
CASP4-208ENST00000530309 SLC12A7Q9Y666 1083 aa9.17□□□□□ -0.94
CASP4-208ENST00000530309 CCNFP41002 786 aa9.16□□□□□ -0.94
CASP4-208ENST00000530309 DPH6Q7L8W6 267 aa9.16□□□□□ -0.94
CASP4-208ENST00000530309 XAGE3Q8WTP9 111 aa9.16□□□□□ -0.94
CASP4-208ENST00000530309 KIF2CQ99661 725 aa9.16□□□□□ -0.94
CASP4-208ENST00000530309 TRIM55Q9BYV6 548 aa9.16□□□□□ -0.94
CASP4-208ENST00000530309 STOML1Q9UBI4 398 aa9.16□□□□□ -0.94
CASP4-208ENST00000530309 RAXQ9Y2V3 346 aa9.16□□□□□ -0.94
CASP4-208ENST00000530309 POLR2BP30876 1174 aaKnown RBP9.15□□□□□ -0.94
CASP4-208ENST00000530309 CDK5R2Q13319 367 aa9.15□□□□□ -0.94
CASP4-208ENST00000530309 ZYXQ15942 572 aaKnown RBP9.15□□□□□ -0.94
CASP4-208ENST00000530309 UNC5AQ6ZN44 842 aa9.15□□□□□ -0.94
CASP4-208ENST00000530309 PRDM10Q9NQV6 1147 aa9.15□□□□□ -0.94
CASP4-208ENST00000530309 HMX2A2RU54 273 aa9.14□□□□□ -0.95
CASP4-208ENST00000530309 U2SURPO15042 1029 aaKnown RBP9.14□□□□□ -0.95
CASP4-208ENST00000530309 GBP1P32455 592 aa9.14□□□□□ -0.95
CASP4-208ENST00000530309 LETMD1Q6P1Q0 360 aa9.14□□□□□ -0.95
CASP4-208ENST00000530309 GIMAP7Q8NHV1 300 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms