RNA–Protein interactions for RNA: ENST00000530068.5

CTNND1-224, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-224ENST00000530068 MTMR10Q9NXD2 777 aa13.66□□□□□ -0.22
CTNND1-224ENST00000530068 MYH2Q9UKX2 1941 aa13.66□□□□□ -0.22
CTNND1-224ENST00000530068 DOCK1Q14185 1865 aa13.65□□□□□ -0.22
CTNND1-224ENST00000530068 COL6A3P12111 3177 aa13.65□□□□□ -0.22
CTNND1-224ENST00000530068 G3BP1Q13283 466 aaKnown RBP eCLIP13.65□□□□□ -0.22
CTNND1-224ENST00000530068 ZNF316A6NFI3 1004 aaPredicted RBP13.64□□□□□ -0.23
CTNND1-224ENST00000530068 HLA-DOAP06340 250 aa13.64□□□□□ -0.23
CTNND1-224ENST00000530068 COL6A1P12109 1028 aa13.64□□□□□ -0.23
CTNND1-224ENST00000530068 PPP4CP60510 307 aa13.64□□□□□ -0.23
CTNND1-224ENST00000530068 ERVK-9P63128 1117 aa13.64□□□□□ -0.23
CTNND1-224ENST00000530068 ERVK-24P63145 666 aa13.64□□□□□ -0.23
CTNND1-224ENST00000530068 CCNA1P78396 465 aa13.64□□□□□ -0.23
CTNND1-224ENST00000530068 CACNB2Q08289 660 aaPredicted RBP13.64□□□□□ -0.23
CTNND1-224ENST00000530068 RRP1BQ14684 758 aaKnown RBP13.64□□□□□ -0.23
CTNND1-224ENST00000530068 MFSD14CQ5VZR4 134 aa13.64□□□□□ -0.23
CTNND1-224ENST00000530068 FAM109BQ6ICB4 259 aaPredicted RBP13.64□□□□□ -0.23
CTNND1-224ENST00000530068 NAA16Q6N069 864 aaPredicted RBP13.64□□□□□ -0.23
CTNND1-224ENST00000530068 TBC1D9Q6ZT07 1266 aa13.64□□□□□ -0.23
CTNND1-224ENST00000530068 PLEKHH3Q7Z736 793 aa13.64□□□□□ -0.23
CTNND1-224ENST00000530068 METTL16Q86W50 562 aaKnown RBP13.64□□□□□ -0.23
CTNND1-224ENST00000530068 SH3RF3Q8TEJ3 882 aaPredicted RBP13.64□□□□□ -0.23
CTNND1-224ENST00000530068 ARHGAP45Q92619 1136 aa13.64□□□□□ -0.23
CTNND1-224ENST00000530068 USP6NLQ92738 828 aa13.64□□□□□ -0.23
CTNND1-224ENST00000530068 APBA2Q99767 749 aa13.64□□□□□ -0.23
CTNND1-224ENST00000530068 PFASO15067 1338 aa13.64□□□□□ -0.23
CTNND1-224ENST00000530068 DOCK3Q8IZD9 2030 aa13.63□□□□□ -0.23
CTNND1-224ENST00000530068 MSCO60682 206 aa13.63□□□□□ -0.23
CTNND1-224ENST00000530068 USP17L2Q6R6M4 530 aa13.63□□□□□ -0.23
CTNND1-224ENST00000530068 CERS3Q8IU89 383 aa13.63□□□□□ -0.23
CTNND1-224ENST00000530068 TRMT2AQ8IZ69 625 aaKnown RBP13.63□□□□□ -0.23
CTNND1-224ENST00000530068 LBHD1Q9BQE6 289 aaPredicted RBP13.63□□□□□ -0.23
CTNND1-224ENST00000530068 RBPJLQ9UBG7 517 aa13.63□□□□□ -0.23
CTNND1-224ENST00000530068 RABGAP1Q9Y3P9 1069 aa13.63□□□□□ -0.23
CTNND1-224ENST00000530068 PTPRFP10586 1907 aa13.62□□□□□ -0.23
CTNND1-224ENST00000530068 GNAI2P04899 355 aa13.62□□□□□ -0.23
CTNND1-224ENST00000530068 MAP2K5Q13163 448 aa13.62□□□□□ -0.23
CTNND1-224ENST00000530068 CCDC158Q5M9N0 1113 aa13.62□□□□□ -0.23
CTNND1-224ENST00000530068 MORN1Q5T089 497 aa13.62□□□□□ -0.23
CTNND1-224ENST00000530068 PI16Q6UXB8 463 aa13.62□□□□□ -0.23
CTNND1-224ENST00000530068 Q7L0L9 218 aa13.62□□□□□ -0.23
CTNND1-224ENST00000530068 GPR142Q7Z601 462 aa13.62□□□□□ -0.23
CTNND1-224ENST00000530068 TGFBRAP1Q8WUH2 860 aa13.62□□□□□ -0.23
CTNND1-224ENST00000530068 PAGR1Q9BTK6 254 aa13.62□□□□□ -0.23
CTNND1-224ENST00000530068 TXNRD2Q9NNW7 524 aa13.62□□□□□ -0.23
CTNND1-224ENST00000530068 GPR108Q9NPR9 543 aa13.62□□□□□ -0.23
CTNND1-224ENST00000530068 ZBTB21Q9ULJ3 1066 aa13.62□□□□□ -0.23
CTNND1-224ENST00000530068 USP17L15C9J2P7 530 aa13.61□□□□□ -0.23
CTNND1-224ENST00000530068 USP17L13C9JLJ4 530 aa13.61□□□□□ -0.23
CTNND1-224ENST00000530068 USP17L11C9JVI0 530 aa13.61□□□□□ -0.23
CTNND1-224ENST00000530068 USP17L18D6R9N7 530 aa13.61□□□□□ -0.23
CTNND1-224ENST00000530068 USP17L22D6RA61 530 aa13.61□□□□□ -0.23
CTNND1-224ENST00000530068 USP17L17D6RBQ6 530 aa13.61□□□□□ -0.23
CTNND1-224ENST00000530068 USP17L19D6RCP7 530 aa13.61□□□□□ -0.23
CTNND1-224ENST00000530068 USP17L20D6RJB6 530 aa13.61□□□□□ -0.23
CTNND1-224ENST00000530068 IPO8O15397 1037 aaKnown RBP13.61□□□□□ -0.23
CTNND1-224ENST00000530068 MCAMP43121 646 aa13.61□□□□□ -0.23
CTNND1-224ENST00000530068 USP14P54578 494 aa13.61□□□□□ -0.23
CTNND1-224ENST00000530068 USP17L24Q0WX57 530 aa13.61□□□□□ -0.23
CTNND1-224ENST00000530068 LRRC26Q2I0M4 334 aa13.61□□□□□ -0.23
CTNND1-224ENST00000530068 TTC39AQ5SRH9 613 aa13.61□□□□□ -0.23
CTNND1-224ENST00000530068 LHX8Q68G74 356 aa13.61□□□□□ -0.23
CTNND1-224ENST00000530068 MAPKAPK5Q8IW41 473 aa13.61□□□□□ -0.23
CTNND1-224ENST00000530068 EDC3Q96F86 508 aaKnown RBP13.61□□□□□ -0.23
CTNND1-224ENST00000530068 AATFQ9NY61 560 aaKnown RBP eCLIP13.61□□□□□ -0.23
CTNND1-224ENST00000530068 PRKAG2Q9UGJ0 569 aa13.61□□□□□ -0.23
CTNND1-224ENST00000530068 PHIPQ8WWQ0 1821 aa13.61□□□□□ -0.23
CTNND1-224ENST00000530068 SLC15A5A6NIM6 579 aa13.6□□□□□ -0.23
CTNND1-224ENST00000530068 Q3C1V9 767 aa13.6□□□□□ -0.23
CTNND1-224ENST00000530068 CDCA7LQ96GN5 454 aa13.6□□□□□ -0.23
CTNND1-224ENST00000530068 C12orf42Q96LP6 360 aa13.6□□□□□ -0.23
CTNND1-224ENST00000530068 PORCNQ9H237 461 aa13.6□□□□□ -0.23
CTNND1-224ENST00000530068 IVNS1ABPQ9Y6Y0 642 aa13.6□□□□□ -0.23
CTNND1-224ENST00000530068 LOC285556D6RIA3 1793 aa13.6□□□□□ -0.23
CTNND1-224ENST00000530068 FLT1P17948 1338 aa13.6□□□□□ -0.23
CTNND1-224ENST00000530068 GDF11O95390 407 aa13.59□□□□□ -0.23
CTNND1-224ENST00000530068 CCND3P30281 292 aaPredicted RBP13.59□□□□□ -0.23
CTNND1-224ENST00000530068 RARSP54136 660 aaKnown RBP13.59□□□□□ -0.23
CTNND1-224ENST00000530068 MDM2Q00987 491 aaPredicted RBP13.59□□□□□ -0.23
CTNND1-224ENST00000530068 ATP2B2Q01814 1243 aa13.59□□□□□ -0.23
CTNND1-224ENST00000530068 TMED8Q6PL24 325 aaPredicted RBP13.59□□□□□ -0.23
CTNND1-224ENST00000530068 FEZ1Q99689 392 aa13.59□□□□□ -0.23
CTNND1-224ENST00000530068 DNAJC18Q9H819 358 aa13.59□□□□□ -0.23
CTNND1-224ENST00000530068 EMILIN3Q9NT22 766 aa13.59□□□□□ -0.23
CTNND1-224ENST00000530068 PALD1Q9ULE6 856 aa13.59□□□□□ -0.23
CTNND1-224ENST00000530068 POTEB2H3BUK9 544 aa13.58□□□□□ -0.24
CTNND1-224ENST00000530068 HOXC6P09630 235 aa13.58□□□□□ -0.24
CTNND1-224ENST00000530068 CCL14Q16627 93 aa13.58□□□□□ -0.24
CTNND1-224ENST00000530068 WDR78Q5VTH9 848 aa13.58□□□□□ -0.24
CTNND1-224ENST00000530068 LBX2Q6XYB7 198 aa13.58□□□□□ -0.24
CTNND1-224ENST00000530068 LPAR1Q92633 364 aa13.58□□□□□ -0.24
CTNND1-224ENST00000530068 ZNF512BQ96KM6 892 aaPredicted RBP13.58□□□□□ -0.24
CTNND1-224ENST00000530068 SENP6Q9GZR1 1112 aaPredicted RBP13.58□□□□□ -0.24
CTNND1-224ENST00000530068 SNRKQ9NRH2 765 aa13.58□□□□□ -0.24
CTNND1-224ENST00000530068 DDX20Q9UHI6 824 aaKnown RBP13.58□□□□□ -0.24
CTNND1-224ENST00000530068 GH2P01242 217 aa13.57□□□□□ -0.24
CTNND1-224ENST00000530068 PTPREP23469 700 aa13.57□□□□□ -0.24
CTNND1-224ENST00000530068 CNGA1P29973 690 aa13.57□□□□□ -0.24
CTNND1-224ENST00000530068 JAG1P78504 1218 aa13.57□□□□□ -0.24
CTNND1-224ENST00000530068 OS9Q13438 667 aaPredicted RBP13.57□□□□□ -0.24
CTNND1-224ENST00000530068 TTC6Q86TZ1 520 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms