RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 ERO1BQ86YB8 467 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 AMOTL1Q8IY63 956 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 SLC44A5Q8NCS7 719 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 CNKSR2Q8WXI2 1034 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 OPTNQ96CV9 577 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 SLC10A4Q96EP9 437 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 ZIC5Q96T25 663 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 NACAP1Q9BZK3 213 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 NAPBQ9H115 298 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 GINM1Q9NU53 330 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 CDC45O75419 566 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 FGAP02671 866 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 APPP05067 770 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 ASNSP08243 561 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 PTPRAP18433 802 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 TDO2P48775 406 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 CTCFP49711 727 aaPredicted RBP6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 LBX1P52954 281 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 JAG1P78504 1218 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 PPATQ06203 517 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 PPARAQ07869 468 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 SHROOM1Q2M3G4 852 aaPredicted RBP6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 RUFY2Q8WXA3 655 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 DYNLL2Q96FJ2 89 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 OTUD5Q96G74 571 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 MS4A4AQ96JQ5 239 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 DSCC1Q9BVC3 393 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 SWAP70Q9UH65 585 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 ANAPC4Q9UJX5 808 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 ZBTB21Q9ULJ3 1066 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 KCNH4Q9UQ05 1017 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 PLIN4Q96Q06 1357 aa6.76□□□□□ -1.33
RPUSD4-204ENST00000530036 TESPA1A2RU30 521 aaPredicted RBP6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 MINDY4BA8MYZ0 360 aa6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 IRF6O14896 467 aa6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 GDF11O95390 407 aa6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 FGRP09769 529 aa6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 RASA1P20936 1047 aa6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 GUCY1A2P33402 732 aa6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 CDK8P49336 464 aa6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 KIF23Q02241 960 aaPredicted RBP6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 GRM1Q13255 1194 aa6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 CERKLQ49MI3 558 aaPredicted RBP6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 REM2Q8IYK8 340 aaPredicted RBP6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 ESYT1Q9BSJ8 1104 aa6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 TRIM34Q9BYJ4 488 aa6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 TBC1D2Q9BYX2 928 aa6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 NBPF3Q9H094 633 aa6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 PICK1Q9NRD5 415 aa6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 AFG3L2Q9Y4W6 797 aa6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 RLFQ13129 1914 aa6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 A0A0G2JMZ2 1700 aa6.75□□□□□ -1.33
RPUSD4-204ENST00000530036 A0A0G2JLL6 359 aaPredicted RBP6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 MANSC4A6NHS7 340 aaPredicted RBP6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 USP17L5A8MUK1 530 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 CXCL11O14625 94 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 ORC4O43929 436 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 GH2P01242 217 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 AKR1B1P15121 316 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 TM4SF4P48230 202 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 GTF2A2P52657 109 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 PTH1RQ03431 593 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 SREBF2Q12772 1141 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 MKRN3Q13064 507 aaKnown RBP6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 MOGSQ13724 837 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 ABCB5Q2M3G0 1257 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 TMEM179Q6ZVK1 233 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 PRRT2Q7Z6L0 340 aaPredicted RBP6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 CCDC84Q86UT8 332 aaPredicted RBP6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 TBC1D10CQ8IV04 446 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 BRI3BPQ8WY22 251 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 CCDC17Q96LX7 622 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 WDR18Q9BV38 432 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 LSG1Q9H089 658 aaKnown RBP6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 WBP1LQ9NX94 342 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 TACC3Q9Y6A5 838 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 ZHX2Q9Y6X8 837 aa6.74□□□□□ -1.33
RPUSD4-204ENST00000530036 CCL15-CCL14A0A0B4J2E2 113 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 IGKV6D-41A0A0C4DH26 115 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 TRIM75PA6NK02 468 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 IGF2BP3O00425 579 aaKnown RBP eCLIP6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 PRDM1O75626 825 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 SLC3A2P08195 630 aaKnown RBP6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 PCP11498 1178 aaKnown RBP6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 CETPP11597 493 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 INHBEP58166 350 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 HAND2P61296 217 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 MAP2K1Q02750 393 aaPredicted RBP6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 CTDSPL2Q05D32 466 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 PDE4BQ07343 736 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 SNAPC2Q13487 334 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 SEPT2Q15019 361 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 CCL15Q16663 113 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 SH3D19Q5HYK7 790 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 PROCA1Q8NCQ7 364 aaPredicted RBP6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 ZNF280CQ8ND82 737 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 MAP4K1Q92918 833 aa6.73□□□□□ -1.33
RPUSD4-204ENST00000530036 PTPN18Q99952 460 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms