RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 PALD1Q9ULE6 856 aa19.06■□□□□ 0.64
CTSB-215ENST00000528965 ZBTB21Q9ULJ3 1066 aa19.06■□□□□ 0.64
CTSB-215ENST00000528965 SIPA1L1O43166 1804 aa19.06■□□□□ 0.64
CTSB-215ENST00000528965 USP17L10C9JJH3 530 aa19.05■□□□□ 0.64
CTSB-215ENST00000528965 TFRCP02786 760 aaKnown RBP19.05■□□□□ 0.64
CTSB-215ENST00000528965 HMGCRP04035 888 aa19.05■□□□□ 0.64
CTSB-215ENST00000528965 RLBP1P12271 317 aa19.05■□□□□ 0.64
CTSB-215ENST00000528965 HOXA7P31268 230 aaPredicted RBP19.05■□□□□ 0.64
CTSB-215ENST00000528965 USP5P45974 858 aa19.05■□□□□ 0.64
CTSB-215ENST00000528965 FXR1P51114 621 aaKnown RBP eCLIP19.05■□□□□ 0.64
CTSB-215ENST00000528965 MAP3K12Q12852 859 aa19.05■□□□□ 0.64
CTSB-215ENST00000528965 HSP90AB4PQ58FF6 505 aa19.05■□□□□ 0.64
CTSB-215ENST00000528965 CEP85Q6P2H3 762 aa19.05■□□□□ 0.64
CTSB-215ENST00000528965 DEFB118Q96PH6 123 aa19.05■□□□□ 0.64
CTSB-215ENST00000528965 DNAJC18Q9H819 358 aa19.05■□□□□ 0.64
CTSB-215ENST00000528965 PAK6Q9NQU5 681 aaPredicted RBP19.05■□□□□ 0.64
CTSB-215ENST00000528965 MORF4L1Q9UBU8 362 aa19.05■□□□□ 0.64
CTSB-215ENST00000528965 SAP30BPQ9UHR5 308 aaKnown RBP19.05■□□□□ 0.64
CTSB-215ENST00000528965 GDF11O95390 407 aa19.04■□□□□ 0.64
CTSB-215ENST00000528965 MS4A1P11836 297 aa19.04■□□□□ 0.64
CTSB-215ENST00000528965 CHRDL2Q6WN34 429 aa19.04■□□□□ 0.64
CTSB-215ENST00000528965 AACSQ86V21 672 aa19.04■□□□□ 0.64
CTSB-215ENST00000528965 EAF2Q96CJ1 260 aaPredicted RBP19.04■□□□□ 0.64
CTSB-215ENST00000528965 ZBED9Q6R2W3 1325 aa19.03■□□□□ 0.64
CTSB-215ENST00000528965 CDK5RAP2Q96SN8 1893 aa19.03■□□□□ 0.64
CTSB-215ENST00000528965 DYNLL1P63167 89 aaKnown RBP19.03■□□□□ 0.64
CTSB-215ENST00000528965 MAGEB6Q8N7X4 407 aa19.03■□□□□ 0.64
CTSB-215ENST00000528965 MIGA1Q8NAN2 632 aa19.03■□□□□ 0.64
CTSB-215ENST00000528965 SOCS4Q8WXH5 440 aa19.03■□□□□ 0.64
CTSB-215ENST00000528965 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.03■□□□□ 0.643e-6■■□□□ 12.4
CTSB-215ENST00000528965 HERVK_113P62684 666 aa19.02■□□□□ 0.64
CTSB-215ENST00000528965 PDE3AQ14432 1141 aa19.02■□□□□ 0.64
CTSB-215ENST00000528965 TTF1Q15361 905 aaPredicted RBP19.02■□□□□ 0.64
CTSB-215ENST00000528965 USP17L2Q6R6M4 530 aa19.02■□□□□ 0.64
CTSB-215ENST00000528965 TTC6Q86TZ1 520 aa19.02■□□□□ 0.64
CTSB-215ENST00000528965 CCAR1Q8IX12 1150 aaKnown RBP19.02■□□□□ 0.64
CTSB-215ENST00000528965 GPRC5AQ8NFJ5 357 aa19.02■□□□□ 0.64
CTSB-215ENST00000528965 FEZ1Q99689 392 aa19.02■□□□□ 0.64
CTSB-215ENST00000528965 EHD4Q9H223 541 aa19.02■□□□□ 0.64
CTSB-215ENST00000528965 SERPINB13Q9UIV8 391 aa19.02■□□□□ 0.64
CTSB-215ENST00000528965 EXOC6BQ9Y2D4 811 aa19.02■□□□□ 0.64
CTSB-215ENST00000528965 MAPK4P31152 587 aa19.01■□□□□ 0.63
CTSB-215ENST00000528965 CRISPLD2Q9H0B8 497 aa19.01■□□□□ 0.63
CTSB-215ENST00000528965 TRIOBPQ9H2D6 2365 aa19■□□□□ 0.63
CTSB-215ENST00000528965 EVI5O60447 810 aa19■□□□□ 0.63
CTSB-215ENST00000528965 USP14P54578 494 aa19■□□□□ 0.63
CTSB-215ENST00000528965 TRMT44Q8IYL2 757 aaKnown RBP19■□□□□ 0.63
CTSB-215ENST00000528965 ANKLE1Q8NAG6 615 aa19■□□□□ 0.63
CTSB-215ENST00000528965 P2RX7Q99572 595 aaKnown RBP19■□□□□ 0.63
CTSB-215ENST00000528965 NUDT12Q9BQG2 462 aa19■□□□□ 0.63
CTSB-215ENST00000528965 HMX1Q9NP08 348 aaPredicted RBP19■□□□□ 0.63
CTSB-215ENST00000528965 RPTORQ8N122 1335 aa19■□□□□ 0.63
CTSB-215ENST00000528965 HMMRO75330 724 aa18.99■□□□□ 0.63
CTSB-215ENST00000528965 GH2P01242 217 aa18.99■□□□□ 0.63
CTSB-215ENST00000528965 JAG1P78504 1218 aa18.99■□□□□ 0.63
CTSB-215ENST00000528965 NECAB2Q7Z6G3 386 aa18.99■□□□□ 0.63
CTSB-215ENST00000528965 CWC22Q9HCG8 908 aaKnown RBP18.99■□□□□ 0.63
CTSB-215ENST00000528965 GJD2Q9UKL4 321 aa18.99■□□□□ 0.63
CTSB-215ENST00000528965 MYO5AQ9Y4I1 1855 aaKnown RBP18.99■□□□□ 0.63
CTSB-215ENST00000528965 TATDN1Q6P1N9 297 aa18.98■□□□□ 0.63
CTSB-215ENST00000528965 CLASRPQ8N2M8 674 aaKnown RBP18.98■□□□□ 0.63
CTSB-215ENST00000528965 PANK1Q8TE04 598 aa18.98■□□□□ 0.63
CTSB-215ENST00000528965 C12orf42Q96LP6 360 aa18.98■□□□□ 0.63
CTSB-215ENST00000528965 CABP5Q9NP86 173 aa18.98■□□□□ 0.63
CTSB-215ENST00000528965 MYH1P12882 1939 aa18.98■□□□□ 0.63
CTSB-215ENST00000528965 DOCK3Q8IZD9 2030 aa18.97■□□□□ 0.63
CTSB-215ENST00000528965 MAGEB6P1A0A0J9YX57 407 aa18.97■□□□□ 0.63
CTSB-215ENST00000528965 XRCC5P13010 732 aaKnown RBP18.97■□□□□ 0.63
CTSB-215ENST00000528965 ERVK-9P63128 1117 aa18.97■□□□□ 0.63
CTSB-215ENST00000528965 ERVK-24P63145 666 aa18.97■□□□□ 0.63
CTSB-215ENST00000528965 CCNA1P78396 465 aa18.97■□□□□ 0.63
CTSB-215ENST00000528965 RAB3GAP1Q15042 981 aa18.97■□□□□ 0.63
CTSB-215ENST00000528965 ABCB5Q2M3G0 1257 aa18.97■□□□□ 0.63
CTSB-215ENST00000528965 SHROOM1Q2M3G4 852 aaPredicted RBP18.97■□□□□ 0.63
CTSB-215ENST00000528965 CERKLQ49MI3 558 aaPredicted RBP18.97■□□□□ 0.63
CTSB-215ENST00000528965 RHPN1Q8TCX5 695 aa18.97■□□□□ 0.63
CTSB-215ENST00000528965 TRIB2Q92519 343 aa18.97■□□□□ 0.63
CTSB-215ENST00000528965 KIF1BPQ96EK5 621 aa18.97■□□□□ 0.63
CTSB-215ENST00000528965 PAGR1Q9BTK6 254 aa18.97■□□□□ 0.63
CTSB-215ENST00000528965 CRNKL1Q9BZJ0 848 aaKnown RBP18.97■□□□□ 0.63
CTSB-215ENST00000528965 CHMP4BQ9H444 224 aaKnown RBP18.97■□□□□ 0.63
CTSB-215ENST00000528965 ANTXR1Q9H6X2 564 aa18.97■□□□□ 0.63
CTSB-215ENST00000528965 TXNRD2Q9NNW7 524 aa18.97■□□□□ 0.63
CTSB-215ENST00000528965 NDUFB9Q9Y6M9 179 aa18.97■□□□□ 0.63
CTSB-215ENST00000528965 USP17L15C9J2P7 530 aa18.96■□□□□ 0.63
CTSB-215ENST00000528965 USP17L13C9JLJ4 530 aa18.96■□□□□ 0.63
CTSB-215ENST00000528965 USP17L11C9JVI0 530 aa18.96■□□□□ 0.63
CTSB-215ENST00000528965 USP17L18D6R9N7 530 aa18.96■□□□□ 0.63
CTSB-215ENST00000528965 USP17L22D6RA61 530 aa18.96■□□□□ 0.63
CTSB-215ENST00000528965 USP17L17D6RBQ6 530 aa18.96■□□□□ 0.63
CTSB-215ENST00000528965 USP17L19D6RCP7 530 aa18.96■□□□□ 0.63
CTSB-215ENST00000528965 USP17L20D6RJB6 530 aa18.96■□□□□ 0.63
CTSB-215ENST00000528965 GLRX3O76003 335 aaKnown RBP18.96■□□□□ 0.63
CTSB-215ENST00000528965 ZKSCAN1P17029 563 aaPredicted RBP18.96■□□□□ 0.63
CTSB-215ENST00000528965 CYP2B6P20813 491 aa18.96■□□□□ 0.63
CTSB-215ENST00000528965 RGS2P41220 211 aa18.96■□□□□ 0.63
CTSB-215ENST00000528965 USP17L24Q0WX57 530 aa18.96■□□□□ 0.63
CTSB-215ENST00000528965 RPAP2Q8IXW5 612 aaPredicted RBP18.96■□□□□ 0.63
CTSB-215ENST00000528965 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.96■□□□□ 0.63
CTSB-215ENST00000528965 PAWRQ96IZ0 340 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms