RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 SEC62Q99442 399 aaKnown RBP9.47□□□□□ -0.89
CTNND1-219ENST00000528621 HAUS2Q9NVX0 235 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 UTP11Q9Y3A2 253 aaKnown RBP9.47□□□□□ -0.89
CTNND1-219ENST00000528621 KIF1BO60333 1816 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 ZNF445P59923 1031 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 TBC1D8BQ0IIM8 1120 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 NT5C3AQ9H0P0 336 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 AATKQ6ZMQ8 1374 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 MYCLP12524 364 aaPredicted RBP9.46□□□□□ -0.89
CTNND1-219ENST00000528621 YWHAEP62258 255 aaKnown RBP9.46□□□□□ -0.89
CTNND1-219ENST00000528621 ZBTB16Q05516 673 aa9.46□□□□□ -0.89
CTNND1-219ENST00000528621 ZNF274Q96GC6 653 aaPredicted RBP9.46□□□□□ -0.89
CTNND1-219ENST00000528621 SERPINA10Q9UK55 444 aa9.46□□□□□ -0.89
CTNND1-219ENST00000528621 POLR2DO15514 142 aaKnown RBP9.46□□□□□ -0.89
CTNND1-219ENST00000528621 PCP11498 1178 aaKnown RBP9.46□□□□□ -0.89
CTNND1-219ENST00000528621 HARSP12081 509 aaKnown RBP9.46□□□□□ -0.89
CTNND1-219ENST00000528621 ZNF75DP51815 510 aa9.46□□□□□ -0.89
CTNND1-219ENST00000528621 ERCC6LQ2NKX8 1250 aa9.46□□□□□ -0.89
CTNND1-219ENST00000528621 VPS16Q9H269 839 aa9.46□□□□□ -0.89
CTNND1-219ENST00000528621 DNM3Q9UQ16 869 aa9.46□□□□□ -0.89
CTNND1-219ENST00000528621 SPOPO43791 374 aa9.46□□□□□ -0.9
CTNND1-219ENST00000528621 SEC24BO95487 1268 aa9.46□□□□□ -0.9
CTNND1-219ENST00000528621 FANCCQ00597 558 aa9.46□□□□□ -0.9
CTNND1-219ENST00000528621 IFT20Q8IY31 132 aa9.46□□□□□ -0.9
CTNND1-219ENST00000528621 CSGALNACT2Q8N6G5 542 aa9.46□□□□□ -0.9
CTNND1-219ENST00000528621 KLHDC4Q8TBB5 520 aa9.46□□□□□ -0.9
CTNND1-219ENST00000528621 OTUD7AQ8TE49 926 aaPredicted RBP9.46□□□□□ -0.9
CTNND1-219ENST00000528621 ERCC5P28715 1186 aaPredicted RBP9.46□□□□□ -0.9
CTNND1-219ENST00000528621 CTSWP56202 376 aa9.46□□□□□ -0.9
CTNND1-219ENST00000528621 CABP7Q86V35 215 aa9.46□□□□□ -0.9
CTNND1-219ENST00000528621 SECISBP2LQ93073 1101 aaKnown RBP9.46□□□□□ -0.9
CTNND1-219ENST00000528621 E7EVH7 732 aa9.46□□□□□ -0.9
CTNND1-219ENST00000528621 POSTNQ15063 836 aa9.46□□□□□ -0.9
CTNND1-219ENST00000528621 SLC9C1Q4G0N8 1177 aa9.46□□□□□ -0.9
CTNND1-219ENST00000528621 SNX29Q8TEQ0 813 aa9.46□□□□□ -0.9
CTNND1-219ENST00000528621 LEO1Q8WVC0 666 aaPredicted RBP9.46□□□□□ -0.9
CTNND1-219ENST00000528621 TRIM7Q9C029 511 aa9.46□□□□□ -0.9
CTNND1-219ENST00000528621 NCOA5Q9HCD5 579 aaKnown RBP9.46□□□□□ -0.9
CTNND1-219ENST00000528621 EBAG9O00559 213 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 NOP56O00567 594 aaKnown RBP9.45□□□□□ -0.9
CTNND1-219ENST00000528621 ZAP70P43403 619 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 PPARAQ07869 468 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 DIS3L2Q8IYB7 885 aaKnown RBP9.45□□□□□ -0.9
CTNND1-219ENST00000528621 NELFBQ8WX92 580 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 FAM204AQ9H8W3 233 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 PLCB1Q9NQ66 1216 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 NEURL1BA8MQ27 555 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 DDX39AO00148 427 aaKnown RBP9.45□□□□□ -0.9
CTNND1-219ENST00000528621 BCRP11274 1271 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 CAPN2P17655 700 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 KIFC2Q96AC6 838 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 AS3MTQ9HBK9 375 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 NKIRAS1Q9NYS0 192 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 TGFBRAP1Q8WUH2 860 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 RNF34Q969K3 372 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 CFAP57Q96MR6 1250 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 LRWD1Q9UFC0 647 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 KDM5CP41229 1560 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 EFCAB6Q5THR3 1501 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 HSPA2P54652 639 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 CPLX4Q7Z7G2 160 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 FLAD1Q8NFF5 587 aa9.45□□□□□ -0.9
CTNND1-219ENST00000528621 E7EWF7 191 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 ZNF202O95125 648 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 PSMC4P43686 418 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 TCIRG1Q13488 830 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 MTMR3Q13615 1198 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 USH1GQ495M9 461 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 FYB2Q5VWT5 728 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 MYCT1Q8N699 235 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 CCDC110Q8TBZ0 833 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 IWS1Q96ST2 819 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 ATP8A2Q9NTI2 1148 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.44□□□□□ -0.9
CTNND1-219ENST00000528621 DDAH1O94760 285 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 A1BGP04217 495 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 ARID4AP29374 1257 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-219ENST00000528621 B4GALNT4Q76KP1 1039 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 AZI2Q9H6S1 392 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 ZMYM6O95789 1325 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 RNF123Q5XPI4 1314 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 ATP10DQ9P241 1426 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 PNMA6EA0A0J9YXQ4 647 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 MNAT1P51948 309 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.44□□□□□ -0.9
CTNND1-219ENST00000528621 MED23Q9ULK4 1368 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 PLEKHG1Q9ULL1 1385 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 GIGYF1O75420 1035 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-219ENST00000528621 CRCPO75575 148 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 CIB2O75838 187 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 SLC1A4P43007 532 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 DNM2P50570 870 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 MAPK8IP2Q13387 824 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-219ENST00000528621 KRT40Q6A162 431 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 C8orf74Q6P047 294 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 NLRX1Q86UT6 975 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 SLFN12Q8IYM2 578 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 AFAP1L2Q8N4X5 818 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 CBX8Q9HC52 389 aa9.44□□□□□ -0.9
CTNND1-219ENST00000528621 PARP2Q9UGN5 583 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms