RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 ASAP1Q9ULH1 1129 aa20.2■□□□□ 0.82
LTBP3-210ENST00000528516 EBAG9O00559 213 aa20.2■□□□□ 0.82
LTBP3-210ENST00000528516 IGKV5-2P06315 115 aa20.2■□□□□ 0.82
LTBP3-210ENST00000528516 HOXB7P09629 217 aa20.2■□□□□ 0.82
LTBP3-210ENST00000528516 ATL3Q6DD88 541 aa20.2■□□□□ 0.82
LTBP3-210ENST00000528516 FAM71BQ8TC56 605 aa20.2■□□□□ 0.82
LTBP3-210ENST00000528516 NGLY1Q96IV0 654 aa20.2■□□□□ 0.82
LTBP3-210ENST00000528516 CORO7P57737 925 aa20.19■□□□□ 0.82
LTBP3-210ENST00000528516 CCDC178Q5BJE1 867 aa20.19■□□□□ 0.82
LTBP3-210ENST00000528516 HEATR3Q7Z4Q2 680 aa20.19■□□□□ 0.82
LTBP3-210ENST00000528516 GIMAP7Q8NHV1 300 aa20.19■□□□□ 0.82
LTBP3-210ENST00000528516 FAM107BQ9H098 131 aa20.19■□□□□ 0.82
LTBP3-210ENST00000528516 VPS16Q9H269 839 aa20.19■□□□□ 0.82
LTBP3-210ENST00000528516 TFCP2L1Q9NZI6 479 aa20.19■□□□□ 0.82
LTBP3-210ENST00000528516 MYO1BO43795 1136 aa20.19■□□□□ 0.82
LTBP3-210ENST00000528516 CCT5P48643 541 aa20.19■□□□□ 0.82
LTBP3-210ENST00000528516 CT47A1Q5JQC4 288 aaPredicted RBP20.19■□□□□ 0.82
LTBP3-210ENST00000528516 LLPHQ9BRT6 129 aaKnown RBP20.19■□□□□ 0.82
LTBP3-210ENST00000528516 ANGEL1Q9UNK9 670 aaKnown RBP20.19■□□□□ 0.82
LTBP3-210ENST00000528516 ARID5AQ03989 594 aa20.19■□□□□ 0.82
LTBP3-210ENST00000528516 KCNB2Q92953 911 aa20.19■□□□□ 0.82
LTBP3-210ENST00000528516 CAPZA3Q96KX2 299 aa20.19■□□□□ 0.82
LTBP3-210ENST00000528516 TRIM75PA6NK02 468 aa20.18■□□□□ 0.82
LTBP3-210ENST00000528516 RNF40O75150 1001 aa20.18■□□□□ 0.82
LTBP3-210ENST00000528516 RSRC2Q7L4I2 434 aaKnown RBP20.18■□□□□ 0.82
LTBP3-210ENST00000528516 FCHSD1Q86WN1 690 aa20.18■□□□□ 0.82
LTBP3-210ENST00000528516 SDR42E1Q8WUS8 393 aa20.18■□□□□ 0.82
LTBP3-210ENST00000528516 APPBP2Q92624 585 aa20.18■□□□□ 0.82
LTBP3-210ENST00000528516 RGPD8O14715 1765 aaPredicted RBP20.18■□□□□ 0.82
LTBP3-210ENST00000528516 CRB1P82279 1406 aa20.18■□□□□ 0.82
LTBP3-210ENST00000528516 FANCGO15287 622 aa20.18■□□□□ 0.82
LTBP3-210ENST00000528516 TRIM47Q96LD4 638 aa20.18■□□□□ 0.82
LTBP3-210ENST00000528516 KCNH3Q9ULD8 1083 aa20.18■□□□□ 0.82
LTBP3-210ENST00000528516 MTF1Q14872 753 aa20.18■□□□□ 0.82
LTBP3-210ENST00000528516 LRRC31Q6UY01 552 aa20.18■□□□□ 0.82
LTBP3-210ENST00000528516 ESR2Q92731 530 aa20.18■□□□□ 0.82
LTBP3-210ENST00000528516 MCM9Q9NXL9 1143 aa20.18■□□□□ 0.82
LTBP3-210ENST00000528516 ADCY9O60503 1353 aa20.18■□□□□ 0.82
LTBP3-210ENST00000528516 SHTN1A0MZ66 631 aa20.17■□□□□ 0.82
LTBP3-210ENST00000528516 PFKFB2O60825 505 aa20.17■□□□□ 0.82
LTBP3-210ENST00000528516 LINC00301Q8NCQ3 95 aa20.17■□□□□ 0.82
LTBP3-210ENST00000528516 PNKPQ96T60 521 aa20.17■□□□□ 0.82
LTBP3-210ENST00000528516 CXorf56Q9H5V9 222 aa20.17■□□□□ 0.82
LTBP3-210ENST00000528516 A0A087WUV0 522 aaPredicted RBP20.17■□□□□ 0.82
LTBP3-210ENST00000528516 CUTAO60888 179 aa20.17■□□□□ 0.82
LTBP3-210ENST00000528516 PPFIA4O75335 1185 aa20.17■□□□□ 0.82
LTBP3-210ENST00000528516 PRR29P0C7W0 189 aa20.17■□□□□ 0.82
LTBP3-210ENST00000528516 PTPN12Q05209 780 aaKnown RBP20.17■□□□□ 0.82
LTBP3-210ENST00000528516 CCDC96Q2M329 555 aa20.17■□□□□ 0.82
LTBP3-210ENST00000528516 VPS54Q9P1Q0 977 aa20.17■□□□□ 0.82
LTBP3-210ENST00000528516 BTBD18B2RXH4 712 aa20.17■□□□□ 0.82
LTBP3-210ENST00000528516 KIAA0754O94854 1291 aa20.17■□□□□ 0.82
LTBP3-210ENST00000528516 ARHGEF25Q86VW2 580 aa20.17■□□□□ 0.82
LTBP3-210ENST00000528516 NBPF5PQ86XG9 351 aaPredicted RBP20.17■□□□□ 0.82
LTBP3-210ENST00000528516 UBXN6Q9BZV1 441 aa20.17■□□□□ 0.82
LTBP3-210ENST00000528516 JADE2Q9NQC1 790 aa20.17■□□□□ 0.82
LTBP3-210ENST00000528516 CDC23Q9UJX2 597 aa20.17■□□□□ 0.82
LTBP3-210ENST00000528516 BEND6Q5SZJ8 279 aaPredicted RBP20.16■□□□□ 0.82
LTBP3-210ENST00000528516 CCDC148Q8NFR7 591 aa20.16■□□□□ 0.82
LTBP3-210ENST00000528516 HELLSQ9NRZ9 838 aa20.16■□□□□ 0.82
LTBP3-210ENST00000528516 GUCA1BQ9UMX6 200 aa20.16■□□□□ 0.82
LTBP3-210ENST00000528516 CTDP1Q9Y5B0 961 aaPredicted RBP20.16■□□□□ 0.82
LTBP3-210ENST00000528516 STX10O60499 249 aa20.16■□□□□ 0.82
LTBP3-210ENST00000528516 VSNL1P62760 191 aa20.16■□□□□ 0.82
LTBP3-210ENST00000528516 SPECC1LQ69YQ0 1117 aa20.16■□□□□ 0.82
LTBP3-210ENST00000528516 KAT14Q9H8E8 782 aa20.16■□□□□ 0.82
LTBP3-210ENST00000528516 NFE2L3Q9Y4A8 694 aa20.16■□□□□ 0.82
LTBP3-210ENST00000528516 SOWAHDA6NJG2 315 aa20.16■□□□□ 0.82
LTBP3-210ENST00000528516 IKBKBO14920 756 aa20.16■□□□□ 0.82
LTBP3-210ENST00000528516 UQCRFS1P1P0C7P4 283 aa20.16■□□□□ 0.82
LTBP3-210ENST00000528516 PDIA3P30101 505 aaKnown RBP20.16■□□□□ 0.82
LTBP3-210ENST00000528516 NCAPHQ15003 741 aa20.16■□□□□ 0.82
LTBP3-210ENST00000528516 MYSM1Q5VVJ2 828 aa20.16■□□□□ 0.82
LTBP3-210ENST00000528516 CACNA2D4Q7Z3S7 1137 aa20.16■□□□□ 0.82
LTBP3-210ENST00000528516 ANKRD18AQ8IVF6 992 aa20.16■□□□□ 0.82
LTBP3-210ENST00000528516 RTEL1Q9NZ71 1219 aa20.16■□□□□ 0.82
LTBP3-210ENST00000528516 A0A1W2PQ27 194 aa20.15■□□□□ 0.82
LTBP3-210ENST00000528516 A0A1W2PQ64 194 aa20.15■□□□□ 0.82
LTBP3-210ENST00000528516 A0A1W2PQD8 194 aa20.15■□□□□ 0.82
LTBP3-210ENST00000528516 TRIM21P19474 475 aaKnown RBP20.15■□□□□ 0.82
LTBP3-210ENST00000528516 EIF6P56537 245 aaKnown RBP20.15■□□□□ 0.82
LTBP3-210ENST00000528516 PICALMQ13492 652 aa20.15■□□□□ 0.82
LTBP3-210ENST00000528516 IQUBQ8NA54 791 aa20.15■□□□□ 0.82
LTBP3-210ENST00000528516 OSBP2Q969R2 916 aa20.15■□□□□ 0.82
LTBP3-210ENST00000528516 CDC5LQ99459 802 aaKnown RBP20.15■□□□□ 0.82
LTBP3-210ENST00000528516 CCDC152Q4G0S7 254 aa20.15■□□□□ 0.82
LTBP3-210ENST00000528516 BPIFA3Q9BQP9 254 aa20.15■□□□□ 0.82
LTBP3-210ENST00000528516 GREM2Q9H772 168 aa20.15■□□□□ 0.82
LTBP3-210ENST00000528516 ZNF652Q9Y2D9 606 aa20.15■□□□□ 0.82
LTBP3-210ENST00000528516 TFRCP02786 760 aaKnown RBP20.15■□□□□ 0.82
LTBP3-210ENST00000528516 PHKA1P46020 1223 aa20.15■□□□□ 0.82
LTBP3-210ENST00000528516 BLZF1Q9H2G9 400 aa20.14■□□□□ 0.81
LTBP3-210ENST00000528516 MMRN2Q9H8L6 949 aa20.14■□□□□ 0.81
LTBP3-210ENST00000528516 CCDC172P0C7W6 258 aa20.14■□□□□ 0.81
LTBP3-210ENST00000528516 BCAMP50895 628 aa20.14■□□□□ 0.81
LTBP3-210ENST00000528516 FAM47AQ5JRC9 791 aa20.14■□□□□ 0.81
LTBP3-210ENST00000528516 GRAMD1CQ8IYS0 662 aa20.14■□□□□ 0.81
LTBP3-210ENST00000528516 KRI1Q8N9T8 703 aaKnown RBP20.14■□□□□ 0.81
LTBP3-210ENST00000528516 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.14■□□□□ 0.81
LTBP3-210ENST00000528516 MRPL44Q9H9J2 332 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms