RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 NAPBQ9H115 298 aa15.62■□□□□ 0.09
CNKSR1-211ENST00000528001 AS3MTQ9HBK9 375 aa15.62■□□□□ 0.09
CNKSR1-211ENST00000528001 ZNF287Q9HBT7 754 aa15.62■□□□□ 0.09
CNKSR1-211ENST00000528001 AFG3L2Q9Y4W6 797 aa15.62■□□□□ 0.09
CNKSR1-211ENST00000528001 USP17L5A8MUK1 530 aa15.61■□□□□ 0.09
CNKSR1-211ENST00000528001 IRF6O14896 467 aa15.61■□□□□ 0.09
CNKSR1-211ENST00000528001 APPP05067 770 aa15.61■□□□□ 0.09
CNKSR1-211ENST00000528001 TDO2P48775 406 aa15.61■□□□□ 0.09
CNKSR1-211ENST00000528001 NT5C2P49902 561 aa15.61■□□□□ 0.09
CNKSR1-211ENST00000528001 OTUD7BQ6GQQ9 843 aa15.61■□□□□ 0.09
CNKSR1-211ENST00000528001 ANAPC4Q9UJX5 808 aa15.61■□□□□ 0.09
CNKSR1-211ENST00000528001 ZBTB21Q9ULJ3 1066 aa15.61■□□□□ 0.09
CNKSR1-211ENST00000528001 SLC3A2P08195 630 aaKnown RBP15.6■□□□□ 0.09
CNKSR1-211ENST00000528001 SLURP2P0DP57 97 aa15.6■□□□□ 0.09
CNKSR1-211ENST00000528001 HSPD1P10809 573 aaKnown RBP15.6■□□□□ 0.09
CNKSR1-211ENST00000528001 CHMLP26374 656 aa15.6■□□□□ 0.09
CNKSR1-211ENST00000528001 RRP1BQ14684 758 aaKnown RBP15.6■□□□□ 0.09
CNKSR1-211ENST00000528001 NOM1Q5C9Z4 860 aaKnown RBP15.6■□□□□ 0.09
CNKSR1-211ENST00000528001 CWC27Q6UX04 472 aaKnown RBP15.6■□□□□ 0.09
CNKSR1-211ENST00000528001 ZNF589Q86UQ0 364 aaPredicted RBP15.6■□□□□ 0.09
CNKSR1-211ENST00000528001 CNKSR2Q8WXI2 1034 aa15.6■□□□□ 0.09
CNKSR1-211ENST00000528001 DSCC1Q9BVC3 393 aa15.6■□□□□ 0.09
CNKSR1-211ENST00000528001 CABP5Q9NP86 173 aa15.6■□□□□ 0.09
CNKSR1-211ENST00000528001 ZHX2Q9Y6X8 837 aa15.6■□□□□ 0.09
CNKSR1-211ENST00000528001 A0A0G2JLL6 359 aaPredicted RBP15.59■□□□□ 0.09
CNKSR1-211ENST00000528001 HSPA1AP0DMV8 641 aaKnown RBP15.59■□□□□ 0.09
CNKSR1-211ENST00000528001 HSPA1BP0DMV9 641 aaKnown RBP15.59■□□□□ 0.09
CNKSR1-211ENST00000528001 CYP2D6P10635 497 aa15.59■□□□□ 0.09
CNKSR1-211ENST00000528001 CDK8P49336 464 aa15.59■□□□□ 0.09
CNKSR1-211ENST00000528001 ABCB5Q2M3G0 1257 aa15.59■□□□□ 0.09
CNKSR1-211ENST00000528001 SH3D19Q5HYK7 790 aa15.59■□□□□ 0.09
CNKSR1-211ENST00000528001 CCDC129Q6ZRS4 1044 aa15.59■□□□□ 0.09
CNKSR1-211ENST00000528001 FASTKD5Q7L8L6 764 aaKnown RBP15.59■□□□□ 0.09
CNKSR1-211ENST00000528001 PRRT2Q7Z6L0 340 aaPredicted RBP15.59■□□□□ 0.09
CNKSR1-211ENST00000528001 IFNL1Q8IU54 200 aa15.59■□□□□ 0.09
CNKSR1-211ENST00000528001 ZNF280CQ8ND82 737 aa15.59■□□□□ 0.09
CNKSR1-211ENST00000528001 SLC45A1Q9Y2W3 748 aa15.59■□□□□ 0.09
CNKSR1-211ENST00000528001 ATAD5Q96QE3 1844 aa15.59■□□□□ 0.09
CNKSR1-211ENST00000528001 BAZ2AQ9UIF9 1905 aaKnown RBP15.58■□□□□ 0.09
CNKSR1-211ENST00000528001 CCL15-CCL14A0A0B4J2E2 113 aa15.58■□□□□ 0.08
CNKSR1-211ENST00000528001 FGRP09769 529 aa15.58■□□□□ 0.08
CNKSR1-211ENST00000528001 PCP11498 1178 aaKnown RBP15.58■□□□□ 0.08
CNKSR1-211ENST00000528001 CCL15Q16663 113 aa15.58■□□□□ 0.08
CNKSR1-211ENST00000528001 SLC4A8Q2Y0W8 1093 aa15.58■□□□□ 0.08
CNKSR1-211ENST00000528001 VPS53Q5VIR6 699 aa15.58■□□□□ 0.08
CNKSR1-211ENST00000528001 TMEM179Q6ZVK1 233 aa15.58■□□□□ 0.08
CNKSR1-211ENST00000528001 ANKRD23Q86SG2 305 aa15.58■□□□□ 0.08
CNKSR1-211ENST00000528001 PROCA1Q8NCQ7 364 aaPredicted RBP15.58■□□□□ 0.08
CNKSR1-211ENST00000528001 BRI3BPQ8WY22 251 aa15.58■□□□□ 0.08
CNKSR1-211ENST00000528001 PHIPQ8WWQ0 1821 aa15.58■□□□□ 0.08
CNKSR1-211ENST00000528001 CYP2D7A0A087X1C5 515 aa15.57■□□□□ 0.08
CNKSR1-211ENST00000528001 C19orf81C9J6K1 198 aa15.57■□□□□ 0.08
CNKSR1-211ENST00000528001 SGSM2O43147 1006 aa15.57■□□□□ 0.08
CNKSR1-211ENST00000528001 GH2P01242 217 aa15.57■□□□□ 0.08
CNKSR1-211ENST00000528001 FGAP02671 866 aa15.57■□□□□ 0.08
CNKSR1-211ENST00000528001 CTCFP49711 727 aaPredicted RBP15.57■□□□□ 0.08
CNKSR1-211ENST00000528001 PDE4BQ07343 736 aa15.57■□□□□ 0.08
CNKSR1-211ENST00000528001 PPARAQ07869 468 aa15.57■□□□□ 0.08
CNKSR1-211ENST00000528001 MKRN3Q13064 507 aaKnown RBP15.57■□□□□ 0.08
CNKSR1-211ENST00000528001 DYNLL2Q96FJ2 89 aa15.57■□□□□ 0.08
CNKSR1-211ENST00000528001 RNF186Q9NXI6 227 aa15.57■□□□□ 0.08
CNKSR1-211ENST00000528001 MINDY4BA8MYZ0 360 aa15.56■□□□□ 0.08
CNKSR1-211ENST00000528001 USP17L10C9JJH3 530 aa15.56■□□□□ 0.08
CNKSR1-211ENST00000528001 IGF2BP3O00425 579 aaKnown RBP eCLIP15.56■□□□□ 0.08
CNKSR1-211ENST00000528001 GDF11O95390 407 aa15.56■□□□□ 0.08
CNKSR1-211ENST00000528001 BACE1P56817 501 aa15.56■□□□□ 0.08
CNKSR1-211ENST00000528001 JAG1P78504 1218 aa15.56■□□□□ 0.08
CNKSR1-211ENST00000528001 MOGSQ13724 837 aa15.56■□□□□ 0.08
CNKSR1-211ENST00000528001 PTPN18Q99952 460 aa15.56■□□□□ 0.08
CNKSR1-211ENST00000528001 CTNNA3Q9UI47 895 aa15.56■□□□□ 0.08
CNKSR1-211ENST00000528001 PLIN4Q96Q06 1357 aa15.56■□□□□ 0.08
CNKSR1-211ENST00000528001 USP14P54578 494 aa15.55■□□□□ 0.08
CNKSR1-211ENST00000528001 EVX2Q03828 476 aa15.55■□□□□ 0.08
CNKSR1-211ENST00000528001 PPP4R3BQ5MIZ7 849 aa15.55■□□□□ 0.08
CNKSR1-211ENST00000528001 SLC44A5Q8NCS7 719 aa15.55■□□□□ 0.08
CNKSR1-211ENST00000528001 C12orf42Q96LP6 360 aa15.55■□□□□ 0.08
CNKSR1-211ENST00000528001 MKNK2Q9HBH9 465 aa15.55■□□□□ 0.08
CNKSR1-211ENST00000528001 SYNPO2Q9UMS6 1093 aa15.55■□□□□ 0.08
CNKSR1-211ENST00000528001 BTBD19C9JJ37 291 aa15.54■□□□□ 0.08
CNKSR1-211ENST00000528001 FOXN1O15353 648 aa15.54■□□□□ 0.08
CNKSR1-211ENST00000528001 ORC4O43929 436 aa15.54■□□□□ 0.08
CNKSR1-211ENST00000528001 RASA1P20936 1047 aa15.54■□□□□ 0.08
CNKSR1-211ENST00000528001 GUCY1A2P33402 732 aa15.54■□□□□ 0.08
CNKSR1-211ENST00000528001 SPP2Q13103 211 aa15.54■□□□□ 0.08
CNKSR1-211ENST00000528001 PABPC4Q13310 644 aaKnown RBP eCLIP15.54■□□□□ 0.08
CNKSR1-211ENST00000528001 CASC1Q6TDU7 716 aa15.54■□□□□ 0.08
CNKSR1-211ENST00000528001 KIAA1683Q9H0B3 1180 aa15.54■□□□□ 0.08
CNKSR1-211ENST00000528001 SH2D4AQ9H788 454 aa15.54■□□□□ 0.08
CNKSR1-211ENST00000528001 KANSL2Q9H9L4 492 aa15.54■□□□□ 0.08
CNKSR1-211ENST00000528001 PRDM10Q9NQV6 1147 aa15.54■□□□□ 0.08
CNKSR1-211ENST00000528001 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.54■□□□□ 0.08
CNKSR1-211ENST00000528001 GREB1LQ9C091 1923 aaPredicted RBP15.54■□□□□ 0.08
CNKSR1-211ENST00000528001 LOC285556D6RIA3 1793 aa15.54■□□□□ 0.08
CNKSR1-211ENST00000528001 PTPRFP10586 1907 aa15.53■□□□□ 0.08
CNKSR1-211ENST00000528001 TRIM75PA6NK02 468 aa15.53■□□□□ 0.08
CNKSR1-211ENST00000528001 TRPA1O75762 1119 aa15.53■□□□□ 0.08
CNKSR1-211ENST00000528001 HSPA8P11142 646 aaKnown RBP15.53■□□□□ 0.08
CNKSR1-211ENST00000528001 AKR1B1P15121 316 aa15.53■□□□□ 0.08
CNKSR1-211ENST00000528001 RAB3GAP1Q15042 981 aa15.53■□□□□ 0.08
CNKSR1-211ENST00000528001 GPAT2Q6NUI2 795 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms