RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 GH2P01242 217 aa18.74■□□□□ 0.59
CAPN1-213ENST00000527897 ADGRA2Q96PE1 1338 aa18.74■□□□□ 0.59
CAPN1-213ENST00000527897 BAZ2AQ9UIF9 1905 aaKnown RBP18.73■□□□□ 0.59
CAPN1-213ENST00000527897 FMNL1O95466 1100 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-213ENST00000527897 CYP2D6P10635 497 aa18.73■□□□□ 0.59
CAPN1-213ENST00000527897 PSMC4P43686 418 aa18.73■□□□□ 0.59
CAPN1-213ENST00000527897 MLLT1Q03111 559 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-213ENST00000527897 EVX2Q03828 476 aa18.73■□□□□ 0.59
CAPN1-213ENST00000527897 CERKLQ49MI3 558 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-213ENST00000527897 ANKRD45Q5TZF3 282 aa18.73■□□□□ 0.59
CAPN1-213ENST00000527897 PROCA1Q8NCQ7 364 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-213ENST00000527897 OTUD7AQ8TE49 926 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-213ENST00000527897 EHD4Q9H223 541 aa18.73■□□□□ 0.59
CAPN1-213ENST00000527897 DCP1AQ9NPI6 582 aaPredicted RBP18.73■□□□□ 0.59
CAPN1-213ENST00000527897 TMOD4Q9NZQ9 345 aa18.73■□□□□ 0.59
CAPN1-213ENST00000527897 PNMA3Q9UL41 463 aa18.73■□□□□ 0.59
CAPN1-213ENST00000527897 PTCH2Q9Y6C5 1203 aa18.73■□□□□ 0.59
CAPN1-213ENST00000527897 DDX60LQ5H9U9 1706 aaKnown RBP18.73■□□□□ 0.59
CAPN1-213ENST00000527897 RAB3GAP1Q15042 981 aa18.72■□□□□ 0.59
CAPN1-213ENST00000527897 UBE3CQ15386 1083 aa18.72■□□□□ 0.59
CAPN1-213ENST00000527897 WDR18Q9BV38 432 aa18.72■□□□□ 0.59
CAPN1-213ENST00000527897 SLC45A1Q9Y2W3 748 aa18.72■□□□□ 0.59
CAPN1-213ENST00000527897 LOC285556D6RIA3 1793 aa18.72■□□□□ 0.59
CAPN1-213ENST00000527897 USP17L10C9JJH3 530 aa18.71■□□□□ 0.59
CAPN1-213ENST00000527897 MPHOSPH10O00566 681 aaKnown RBP18.71■□□□□ 0.59
CAPN1-213ENST00000527897 MYCP01106 439 aaPredicted RBP18.71■□□□□ 0.59
CAPN1-213ENST00000527897 PABPC4Q13310 644 aaKnown RBP eCLIP18.71■□□□□ 0.59
CAPN1-213ENST00000527897 ZYXQ15942 572 aaKnown RBP18.71■□□□□ 0.59
CAPN1-213ENST00000527897 ABCB5Q2M3G0 1257 aa18.71■□□□□ 0.59
CAPN1-213ENST00000527897 SLC9C1Q4G0N8 1177 aa18.71■□□□□ 0.59
CAPN1-213ENST00000527897 TATDN1Q6P1N9 297 aa18.71■□□□□ 0.59
CAPN1-213ENST00000527897 KBTBD3Q8NAB2 608 aa18.71■□□□□ 0.59
CAPN1-213ENST00000527897 DDRGK1Q96HY6 314 aa18.71■□□□□ 0.59
CAPN1-213ENST00000527897 FEZ1Q99689 392 aa18.71■□□□□ 0.59
CAPN1-213ENST00000527897 PUS7LQ9H0K6 701 aaKnown RBP18.71■□□□□ 0.59
CAPN1-213ENST00000527897 CABP5Q9NP86 173 aa18.71■□□□□ 0.59
CAPN1-213ENST00000527897 GINM1Q9NU53 330 aa18.71■□□□□ 0.59
CAPN1-213ENST00000527897 SLC4A4Q9Y6R1 1079 aa18.71■□□□□ 0.59
CAPN1-213ENST00000527897 ERC2O15083 957 aa18.7■□□□□ 0.58
CAPN1-213ENST00000527897 BCRP11274 1271 aa18.7■□□□□ 0.58
CAPN1-213ENST00000527897 OSBPP22059 807 aa18.7■□□□□ 0.58
CAPN1-213ENST00000527897 CTGFP29279 349 aa18.7■□□□□ 0.58
CAPN1-213ENST00000527897 SHMT1P34896 483 aa18.7■□□□□ 0.58
CAPN1-213ENST00000527897 BACE1P56817 501 aa18.7■□□□□ 0.58
CAPN1-213ENST00000527897 AMOTL1Q8IY63 956 aa18.7■□□□□ 0.58
CAPN1-213ENST00000527897 ANKRD13CQ8N6S4 541 aa18.7■□□□□ 0.58
CAPN1-213ENST00000527897 TRIM47Q96LD4 638 aa18.7■□□□□ 0.58
CAPN1-213ENST00000527897 TTC41PQ6P2S7 1318 aa18.7■□□□□ 0.58
CAPN1-213ENST00000527897 MYH8P13535 1937 aa18.69■□□□□ 0.58
CAPN1-213ENST00000527897 MX1P20591 662 aa18.69■□□□□ 0.58
CAPN1-213ENST00000527897 RGS19P49795 217 aa18.69■□□□□ 0.58
CAPN1-213ENST00000527897 FCGRTP55899 365 aa18.69■□□□□ 0.58
CAPN1-213ENST00000527897 IRX3P78415 501 aaPredicted RBP18.69■□□□□ 0.58
CAPN1-213ENST00000527897 SH3D19Q5HYK7 790 aa18.69■□□□□ 0.58
CAPN1-213ENST00000527897 SLC44A5Q8NCS7 719 aa18.69■□□□□ 0.58
CAPN1-213ENST00000527897 EXOC6Q8TAG9 804 aa18.69■□□□□ 0.58
CAPN1-213ENST00000527897 DYNLL2Q96FJ2 89 aa18.69■□□□□ 0.58
CAPN1-213ENST00000527897 ASCC2Q9H1I8 757 aaPredicted RBP18.69■□□□□ 0.58
CAPN1-213ENST00000527897 ATP8A2Q9NTI2 1148 aa18.69■□□□□ 0.58
CAPN1-213ENST00000527897 SUPT16HQ9Y5B9 1047 aaKnown RBP18.69■□□□□ 0.58
CAPN1-213ENST00000527897 MGAMO43451 1857 aa18.69■□□□□ 0.58
CAPN1-213ENST00000527897 CYP2D7A0A087X1C5 515 aa18.68■□□□□ 0.58
CAPN1-213ENST00000527897 C19orf81C9J6K1 198 aa18.68■□□□□ 0.58
CAPN1-213ENST00000527897 GLRX3O76003 335 aaKnown RBP18.68■□□□□ 0.58
CAPN1-213ENST00000527897 GNRH1P01148 92 aa18.68■□□□□ 0.58
CAPN1-213ENST00000527897 HOXD10P28358 340 aa18.68■□□□□ 0.58
CAPN1-213ENST00000527897 HDAC1Q13547 482 aaPredicted RBP18.68■□□□□ 0.58
CAPN1-213ENST00000527897 SH3TC2Q8TF17 1288 aa18.68■□□□□ 0.58
CAPN1-213ENST00000527897 GCC1Q96CN9 775 aa18.68■□□□□ 0.58
CAPN1-213ENST00000527897 USP17L12C9JPN9 530 aa18.67■□□□□ 0.58
CAPN1-213ENST00000527897 USP17L21D6R901 530 aa18.67■□□□□ 0.58
CAPN1-213ENST00000527897 RNF113AO15541 343 aaKnown RBP18.67■□□□□ 0.58
CAPN1-213ENST00000527897 GABPAQ06546 454 aa18.67■□□□□ 0.58
CAPN1-213ENST00000527897 USP17L2Q6R6M4 530 aa18.67■□□□□ 0.58
CAPN1-213ENST00000527897 NBPF11Q86T75 865 aa18.67■□□□□ 0.58
CAPN1-213ENST00000527897 PI4K2BQ8TCG2 481 aa18.67■□□□□ 0.58
CAPN1-213ENST00000527897 RAET1EQ8TD07 263 aa18.67■□□□□ 0.58
CAPN1-213ENST00000527897 APPBP2Q92624 585 aa18.67■□□□□ 0.58
CAPN1-213ENST00000527897 FSD1Q9BTV5 496 aa18.67■□□□□ 0.58
CAPN1-213ENST00000527897 SRRDQ9UH36 339 aa18.67■□□□□ 0.58
CAPN1-213ENST00000527897 MYPNQ86TC9 1320 aa18.67■□□□□ 0.58
CAPN1-213ENST00000527897 SEPT2Q15019 361 aa18.66■□□□□ 0.58
CAPN1-213ENST00000527897 LRRFIP1Q32MZ4 808 aaKnown RBP18.66■□□□□ 0.58
CAPN1-213ENST00000527897 B4GALNT3Q6L9W6 998 aa18.66■□□□□ 0.58
CAPN1-213ENST00000527897 ACER1Q8TDN7 264 aa18.66■□□□□ 0.58
CAPN1-213ENST00000527897 OSBP2Q969R2 916 aa18.66■□□□□ 0.58
CAPN1-213ENST00000527897 RWDD1Q9H446 243 aaPredicted RBP18.66■□□□□ 0.58
CAPN1-213ENST00000527897 TNRC18O15417 2968 aaPredicted RBP18.66■□□□□ 0.58
CAPN1-213ENST00000527897 SMIM22K7EJ46 135 aa18.65■□□□□ 0.58
CAPN1-213ENST00000527897 TNPO2O14787 897 aaKnown RBP18.65■□□□□ 0.58
CAPN1-213ENST00000527897 ZFYP08048 801 aaPredicted RBP18.65■□□□□ 0.58
CAPN1-213ENST00000527897 PRMT2P55345 433 aa18.65■□□□□ 0.58
CAPN1-213ENST00000527897 PRKCZQ05513 592 aa18.65■□□□□ 0.58
CAPN1-213ENST00000527897 STK11IPQ8N1F8 1099 aa18.65■□□□□ 0.58
CAPN1-213ENST00000527897 ARMC5Q96C12 935 aa18.65■□□□□ 0.58
CAPN1-213ENST00000527897 STRBPQ96SI9 672 aaKnown RBP18.65■□□□□ 0.58
CAPN1-213ENST00000527897 EMILIN3Q9NT22 766 aa18.65■□□□□ 0.58
CAPN1-213ENST00000527897 SWAP70Q9UH65 585 aa18.65■□□□□ 0.58
CAPN1-213ENST00000527897 TAOK2Q9UL54 1235 aa18.65■□□□□ 0.58
CAPN1-213ENST00000527897 POTEFA5A3E0 1075 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms